The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	29	5892	1917833	transposase,integrase	Streptococcus_phage(85.71%)	7	2667:2680	15127:15140
WP_158913146.1|29_1380_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	1.4e-66
WP_000336323.1|2194_2362_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|2421_2775_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
2667:2680	attL	TTTCAATCAATGCT	NA	NA	NA	NA
WP_000804885.1|3279_3702_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|3698_3929_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|4389_4593_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|4674_5892_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
15127:15140	attR	AGCATTGATTGAAA	NA	NA	NA	NA
>prophage 2
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	157465	166778	1917833		Bacillus_virus(50.0%)	9	NA	NA
WP_158913224.1|157465_158809_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	29.4	5.5e-44
WP_158913226.1|159002_159830_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_074965403.1|159844_160648_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_158913228.1|160647_161391_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.9	3.4e-27
WP_006531154.1|161473_161698_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_039695905.1|161764_162679_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.4	8.8e-86
WP_158913230.1|162926_164387_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.3	2.9e-99
WP_074561295.1|164386_165211_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	54.9	1.2e-73
WP_158913232.1|165440_166778_+	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	35.7	2.4e-68
>prophage 3
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	203411	213842	1917833	transposase,tRNA	Erysipelothrix_phage(16.67%)	10	NA	NA
WP_158913260.1|203411_204764_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	33.9	1.1e-73
WP_158913146.1|204837_206188_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	1.4e-66
WP_158913261.1|206339_206912_+	GNAT family N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	38.7	7.8e-24
WP_158913262.1|206937_207672_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
WP_074479704.1|207678_208317_-	deoxynucleoside kinase	NA	Q5ULP7	Lactobacillus_virus	43.6	1.0e-40
WP_158913263.1|208715_209483_-	phosphorylase	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	40.2	4.0e-23
WP_004230643.1|209730_209985_+	DUF1912 family protein	NA	NA	NA	NA	NA
WP_074559400.1|209986_210304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157628779.1|210553_211132_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_074629816.1|211190_213842_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.2	4.1e-144
>prophage 4
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	340447	348300	1917833		Staphylococcus_phage(57.14%)	8	NA	NA
WP_158913381.1|340447_341503_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	35.2	1.1e-39
WP_039697187.1|341502_342105_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.8	6.9e-31
WP_039697186.1|342105_343284_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.0	1.1e-104
WP_158913383.1|343295_343757_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	57.3	1.6e-43
WP_014334477.1|343819_344386_-	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA	NA
WP_158913385.1|344651_345614_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	71.5	6.8e-129
WP_158913387.1|345842_348002_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	62.3	2.0e-261
WP_014334480.1|348072_348300_-	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	42.9	1.3e-11
>prophage 5
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	570878	579393	1917833		Bacillus_phage(33.33%)	9	NA	NA
WP_024344152.1|570878_571088_-	hypothetical protein	NA	Q7Y4M2	Streptococcus_phage	87.0	4.7e-27
WP_039696960.1|571549_572131_+	thymidine kinase	NA	A0A249XZX5	Enterococcus_phage	55.4	1.3e-50
WP_039696959.1|572167_573247_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_158913651.1|573246_574077_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_158913655.1|574069_574669_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	30.6	2.0e-17
WP_158913657.1|574751_576002_+	serine hydroxymethyltransferase	NA	A0A240F2Y9	Aeromonas_phage	54.0	6.6e-100
WP_157628958.1|576043_577021_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_074601803.1|577020_577623_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	44.5	4.1e-23
WP_158913660.1|577668_579393_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	26.9	8.3e-45
>prophage 6
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	622073	630924	1917833		Streptococcus_phage(66.67%)	7	NA	NA
WP_158913738.1|622073_622760_+	helix-turn-helix domain-containing protein	NA	E8ZDN4	Streptococcus_phage	48.7	1.3e-57
WP_074560101.1|622761_622965_+	hypothetical protein	NA	D0R0A4	Streptococcus_phage	50.8	1.4e-12
WP_158913741.1|622965_624381_+	DNA polymerase	NA	M1Q231	Streptococcus_phage	73.4	8.8e-202
WP_158913744.1|624382_624742_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	47.3	6.8e-18
WP_158913746.1|624950_629663_+	DEAD/DEAH box helicase family protein	NA	A0A2H4UTW8	Bodo_saltans_virus	28.4	3.4e-56
WP_158913749.1|629742_630009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014334717.1|630225_630924_+	GntR family transcriptional regulator	NA	A0A2H5BLU5	Streptomyces_phage	36.7	2.0e-05
>prophage 7
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	840745	868364	1917833	transposase,tRNA	Bacillus_phage(47.06%)	22	NA	NA
WP_158914021.1|840745_843694_-	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	28.3	5.0e-98
WP_158914023.1|843707_845828_-	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	32.1	6.4e-79
WP_158913146.1|846280_847631_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	1.4e-66
WP_158914025.1|847681_848908_-	GHKL domain-containing protein	NA	W8CYF6	Bacillus_phage	23.2	1.3e-07
WP_158914027.1|848916_849597_-	response regulator	NA	W8CYM9	Bacillus_phage	30.7	8.1e-20
WP_158914029.1|849599_850235_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_158914031.1|850335_852108_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	29.2	4.1e-47
WP_158914033.1|852097_853912_-	ATP-binding cassette domain-containing protein	NA	F2Y302	Organic_Lake_phycodnavirus	29.1	1.0e-16
WP_039696758.1|853915_854356_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_157629110.1|854499_854910_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.7	1.9e-08
WP_158914035.1|854906_855416_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_039696755.1|855572_856922_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_039696754.1|857158_857656_+	DUF308 domain-containing protein	NA	NA	NA	NA	NA
WP_158914037.1|857731_859082_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.5	2.3e-66
WP_158914039.1|859131_859623_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	61.6	2.8e-46
WP_158914042.1|859771_860485_-	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	45.7	3.4e-61
WP_158914044.1|860477_860924_-	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	58.2	1.9e-46
WP_158914046.1|860923_861574_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.9	4.1e-61
WP_158914048.1|861740_863510_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	30.3	5.7e-57
WP_158914051.1|863512_865252_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	24.7	3.8e-37
WP_158914053.1|865293_867162_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	33.2	6.4e-67
WP_158914055.1|867158_868364_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.0	2.1e-42
>prophage 8
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	1213154	1223001	1917833		Streptococcus_phage(75.0%)	12	NA	NA
WP_039696452.1|1213154_1214246_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	82.0	4.6e-174
WP_157629280.1|1214380_1215010_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_039696436.1|1215123_1215465_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_158914353.1|1215545_1216781_-	ammonium transporter	NA	NA	NA	NA	NA
WP_158914355.1|1217136_1218003_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	76.0	4.7e-121
WP_039696433.1|1218012_1218333_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.3	2.6e-29
WP_158914357.1|1218325_1219126_-	signal peptidase II	NA	NA	NA	NA	NA
WP_158914359.1|1219122_1219998_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	48.6	3.4e-71
WP_074564243.1|1220016_1220643_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	1.2e-70
WP_157629288.1|1220732_1221392_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	67.0	4.3e-74
WP_039696428.1|1221526_1222237_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	2.6e-13
WP_039696427.1|1222236_1223001_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.2	7.2e-17
>prophage 9
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	1412881	1454014	1917833	tRNA,protease,bacteriocin,transposase	Streptococcus_phage(25.0%)	38	NA	NA
WP_039696260.1|1412881_1413892_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.2	1.8e-60
WP_074602918.1|1413888_1414341_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_080728286.1|1414324_1415017_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_074564447.1|1415205_1415436_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_158914522.1|1415437_1417120_+	RNase J family beta-CASP ribonuclease	NA	NA	NA	NA	NA
WP_074564449.1|1417220_1417883_-	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_074626817.1|1418068_1419508_-	glutamate synthase subunit beta	NA	NA	NA	NA	NA
WP_158914524.1|1419510_1424028_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
WP_039696248.1|1424219_1425566_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_015695674.1|1425612_1425984_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_133018150.1|1426065_1426611_-	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_033153373.1|1426743_1427940_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_021143165.1|1428120_1429134_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_020917479.1|1429341_1431420_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.8	4.8e-63
WP_004233289.1|1431621_1432092_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_003066537.1|1432113_1432527_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_020917482.1|1432772_1433588_-	pur operon repressor	NA	A0A1X9I6E2	Streptococcus_phage	28.8	1.6e-06
WP_158914526.1|1434006_1434465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158914528.1|1434566_1435918_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.1	1.1e-65
WP_158914530.1|1436002_1436941_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_006531897.1|1436930_1438205_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_158914532.1|1438206_1438839_-	thiamine diphosphokinase	NA	NA	NA	NA	NA
WP_006531895.1|1438831_1439494_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_006531894.1|1439500_1440373_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_158914534.1|1440690_1441425_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	27.0	8.0e-13
WP_158914865.1|1442086_1443448_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_158914535.1|1443452_1444829_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_158914536.1|1444993_1445287_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_158914537.1|1445314_1445620_-|bacteriocin	bacteriocin immunity protein	bacteriocin	Q9AZK7	Lactococcus_phage	41.3	3.3e-05
WP_039696228.1|1445632_1445782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158914538.1|1446044_1446197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158914539.1|1446219_1447539_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_158914540.1|1447543_1448275_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	A0A1V0E029	Clostridioides_phage	22.2	1.9e-14
WP_061408660.1|1449580_1449892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158914541.1|1449957_1450191_-|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_158914542.1|1450426_1452574_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.3	5.7e-43
WP_158914543.1|1452627_1453371_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_158914544.1|1453258_1454014_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 10
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	1632624	1640829	1917833		Staphylococcus_phage(33.33%)	9	NA	NA
WP_074603181.1|1632624_1633293_-	transglycosylase family protein	NA	Q4Z8Z7	Staphylococcus_phage	70.5	2.9e-22
WP_074603183.1|1633544_1634141_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A096XT26	Enterococcus_phage	47.8	1.2e-22
WP_039696097.1|1634279_1635077_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_074564705.1|1635069_1635912_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	2.3e-16
WP_039696095.1|1635887_1636727_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.4	2.9e-19
WP_039696094.1|1636723_1637278_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_074564707.1|1637290_1638229_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_074603186.1|1638294_1639584_-	insulinase family protein	NA	K7Z7Q1	Megavirus	27.9	4.5e-19
WP_006531474.1|1639584_1640829_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	44.0	3.3e-91
>prophage 11
NZ_CP046875	Streptococcus sp. CNU 77-61 chromosome, complete genome	1917833	1901854	1916174	1917833		Streptococcus_phage(91.67%)	15	NA	NA
WP_039697537.1|1901854_1902469_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	38.8	2.5e-12
WP_052071136.1|1902535_1903210_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_158914814.1|1903271_1904435_+	MFS transporter	NA	NA	NA	NA	NA
WP_000420682.1|1904763_1905078_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1905093_1905480_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_158914816.1|1905508_1906894_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	99.8	3.2e-265
WP_000879507.1|1906896_1907049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1907071_1908277_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1908319_1908541_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_158914818.1|1908657_1909155_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	99.4	2.9e-91
WP_000506270.1|1909129_1909636_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1909619_1912067_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|1912069_1914247_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|1914243_1915245_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|1915241_1916174_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
