The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046913	Paraburkholderia sp. DHF22 chromosome 1, complete sequence	3240103	555634	564963	3240103		Pandoravirus(33.33%)	7	NA	NA
WP_158948438.1|555634_557593_+	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	47.7	9.5e-146
WP_158948440.1|557882_559019_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	29.6	1.0e-22
WP_158948442.1|559098_561027_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.3	7.6e-55
WP_158948444.1|561128_561944_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	31.7	8.2e-35
WP_158948446.1|562001_562697_-	deoxynucleoside kinase	NA	NA	NA	NA	NA
WP_158951832.1|562693_563269_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	33.9	2.5e-14
WP_158948448.1|563340_564963_-	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	30.7	1.1e-25
>prophage 2
NZ_CP046913	Paraburkholderia sp. DHF22 chromosome 1, complete sequence	3240103	704843	713684	3240103		Escherichia_phage(28.57%)	9	NA	NA
WP_158948648.1|704843_705905_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.6	1.6e-86
WP_158948650.1|705916_706810_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.2	1.2e-98
WP_158948652.1|706794_707346_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	54.1	2.5e-51
WP_158948654.1|707353_708250_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.6	8.8e-30
WP_158948656.1|708280_709267_+	ADP-glyceromanno-heptose 6-epimerase	NA	Q58M42	Prochlorococcus_phage	32.7	2.4e-28
WP_158948658.1|709268_710189_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_158948660.1|710248_711031_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_158948662.1|711040_711790_+	ATP-binding cassette domain-containing protein	NA	R4TX06	Phaeocystis_globosa_virus	33.3	1.3e-05
WP_158948664.1|711791_713684_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	34.0	7.1e-05
>prophage 3
NZ_CP046913	Paraburkholderia sp. DHF22 chromosome 1, complete sequence	3240103	2346673	2353338	3240103		Staphylococcus_phage(50.0%)	7	NA	NA
WP_158951113.1|2346673_2347792_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2I2L4R9	Orpheovirus	31.9	1.3e-46
WP_158951114.1|2347843_2348473_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.7	1.2e-28
WP_158951115.1|2348901_2350731_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	28.2	8.0e-30
WP_158951116.1|2350727_2351084_-	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	55.3	7.5e-17
WP_158951117.1|2351094_2351385_-	excinuclease ABC subunit A	NA	NA	NA	NA	NA
WP_158951118.1|2351597_2352749_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	35.7	9.8e-50
WP_158951119.1|2352825_2353338_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	39.1	1.6e-20
>prophage 1
NZ_CP046915	Paraburkholderia sp. DHF22 chromosome 3, complete sequence	1436412	330030	392320	1436412	plate,holin,protease	Yellowstone_lake_phycodnavirus(20.0%)	46	NA	NA
WP_158954641.1|330030_330606_-|protease	DJ-1/PfpI/YhbO family deglycase/protease	protease	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	29.0	8.1e-13
WP_158954643.1|330671_330995_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_158954645.1|331214_331391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954647.1|331398_332871_-	phosphoesterase	NA	NA	NA	NA	NA
WP_158954649.1|333106_334087_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_158954651.1|334264_336007_+	L-lactate permease	NA	NA	NA	NA	NA
WP_158954652.1|336101_337277_+	CoA transferase	NA	NA	NA	NA	NA
WP_158954654.1|337273_338209_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_158954656.1|338264_340202_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	28.8	1.6e-12
WP_158956443.1|340675_341866_+	6-bladed beta-propeller	NA	NA	NA	NA	NA
WP_158954658.1|341957_342236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158954660.1|342321_343722_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_158956445.1|343718_344210_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_158954662.1|344457_345561_+	ligase-associated DNA damage response exonuclease	NA	NA	NA	NA	NA
WP_158954664.1|345557_347237_+	ATP-dependent DNA ligase	NA	NA	NA	NA	NA
WP_158954666.1|347233_350020_+	ligase-associated DNA damage response DEXH box helicase	NA	NA	NA	NA	NA
WP_158954668.1|350009_350672_+	ligase-associated DNA damage response endonuclease PdeM	NA	NA	NA	NA	NA
WP_158954670.1|350811_352680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954672.1|354285_356007_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
WP_158956447.1|356179_357085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954674.1|357210_358413_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_158954676.1|358409_362624_-	type VI secretion protein IcmF	NA	NA	NA	NA	NA
WP_158954678.1|362697_363450_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_158954680.1|363520_364855_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_158956449.1|364851_365298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954682.1|365345_366770_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA	NA
WP_158954684.1|366766_367468_-	amino acid racemase	NA	NA	NA	NA	NA
WP_158956451.1|367476_368751_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA	NA
WP_158956453.1|368811_369561_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_158954686.1|369871_370144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954688.1|370151_370538_-	DUF4280 domain-containing protein	NA	NA	NA	NA	NA
WP_158956455.1|370606_371272_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
WP_158954690.1|371386_373315_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	24.3	1.8e-16
WP_158954692.1|373319_376052_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	30.9	6.1e-82
WP_158954694.1|376066_377221_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_158954696.1|377175_378933_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_158954698.1|378934_379387_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_158954700.1|379473_379965_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
WP_158954702.1|380039_381539_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_158954704.1|381602_382151_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_158954706.1|382899_383316_-	DUF296 domain-containing protein	NA	NA	NA	NA	NA
WP_158954708.1|383464_384397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158954710.1|384703_385960_+	DUF2252 domain-containing protein	NA	NA	NA	NA	NA
WP_158954712.1|386027_387179_+	response regulator	NA	NA	NA	NA	NA
WP_158954713.1|387175_389848_-	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	25.9	1.8e-06
WP_158954715.1|390205_392320_-|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
>prophage 1
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	576305	583389	1253746		Escherichia_phage(100.0%)	9	NA	NA
WP_158957514.1|576305_577193_-	hypothetical protein	NA	I7B6L0	Escherichia_phage	38.3	3.0e-06
WP_158957516.1|577195_578086_-	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	42.3	2.5e-37
WP_158958643.1|578089_579490_-	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	46.0	2.6e-52
WP_158957518.1|579522_579870_-	hypothetical protein	NA	A0A0U2I1S2	Escherichia_phage	49.6	6.8e-23
WP_158957520.1|579881_580526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957522.1|580522_580708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957524.1|580704_581235_-	hypothetical protein	NA	A0A0U2JTX5	Escherichia_phage	46.2	4.4e-13
WP_158957526.1|582371_582650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957528.1|582651_583389_-	hypothetical protein	NA	A0A0U2JGI7	Escherichia_phage	37.0	1.2e-24
>prophage 2
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	590891	609280	1253746	terminase	Escherichia_phage(42.86%)	23	NA	NA
WP_158957548.1|590891_591413_-	hypothetical protein	NA	A0A0U2SAX6	Escherichia_phage	30.7	8.7e-06
WP_158957550.1|591531_592557_-	DUF2184 domain-containing protein	NA	A0A0U2QQI2	Escherichia_phage	40.9	9.0e-63
WP_158957552.1|592569_593175_-	hypothetical protein	NA	A0A0U2S600	Escherichia_phage	32.5	2.5e-12
WP_158957554.1|593175_595077_-	NUDIX domain-containing protein	NA	A0A0U2QW61	Escherichia_phage	40.9	9.8e-39
WP_158957556.1|595220_595442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957558.1|595446_596283_-	hypothetical protein	NA	A0A0U2I1R8	Escherichia_phage	48.1	1.9e-63
WP_158958647.1|596279_597659_-	DUF1073 domain-containing protein	NA	NA	NA	NA	NA
WP_158957560.1|597743_599018_-	hypothetical protein	NA	A0A0U2JTW9	Escherichia_phage	39.3	4.7e-85
WP_158957562.1|599014_599476_-|terminase	terminase small subunit protein	terminase	F8TUR4	EBPR_podovirus	49.6	5.0e-29
WP_158957564.1|599632_599854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957566.1|601108_601405_-	hypothetical protein	NA	A0A2R2YAX9	Pseudomonas_phage	40.9	9.6e-10
WP_158957568.1|601401_602571_-	oxidoreductase	NA	A0A088F6J4	Enterobacteria_phage	36.2	2.9e-57
WP_158957570.1|602905_603154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957572.1|603266_603662_-	DUF2591 domain-containing protein	NA	F8TVJ2	EBPR_siphovirus	36.0	1.7e-06
WP_158957574.1|603658_604063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957576.1|604175_604625_-	hypothetical protein	NA	W0B4E9	Acinetobacter_phage	47.4	4.9e-13
WP_158958649.1|605494_605821_-	hypothetical protein	NA	A0A2I7RQI4	Vibrio_phage	49.5	3.2e-14
WP_158957578.1|606175_606361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957580.1|606347_606539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957582.1|606535_606721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957584.1|606717_606960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957586.1|607597_608011_-	hypothetical protein	NA	A0A088F6N3	Vibrio_phage	35.2	8.2e-07
WP_158957588.1|608320_609280_-	AAA family ATPase	NA	A0A0U4B0G9	Pseudomonas_phage	38.7	3.8e-55
>prophage 3
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	619697	626243	1253746		Escherichia_phage(16.67%)	14	NA	NA
WP_158957625.1|619697_620159_+	hypothetical protein	NA	A0A1Z1LW18	Escherichia_phage	41.0	1.9e-20
WP_158957627.1|620722_621082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957629.1|621108_621312_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_158957631.1|621336_621690_+	hypothetical protein	NA	K7PKY8	Enterobacterial_phage	33.0	2.0e-09
WP_158957633.1|621696_622794_+	restriction alleviation protein, Lar family	NA	NA	NA	NA	NA
WP_158957635.1|622786_623185_+	hypothetical protein	NA	I6NVL3	Burkholderia_virus	74.5	1.1e-13
WP_158957637.1|623181_623346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957639.1|623342_623729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957641.1|623778_624075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957643.1|624247_624616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957645.1|624900_625251_+	hypothetical protein	NA	A0A0U4KRZ0	Arthrobacter_phage	60.0	2.0e-06
WP_158957647.1|625395_625599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957649.1|625595_625991_+	hypothetical protein	NA	J7HXK7	Pseudomonas_phage	40.6	8.3e-09
WP_158957651.1|626045_626243_+	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	34.4	2.8e-05
>prophage 4
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	639933	647020	1253746		Escherichia_phage(100.0%)	9	NA	NA
WP_158957669.1|639933_640938_-	hypothetical protein	NA	I7B6L0	Escherichia_phage	38.2	7.6e-06
WP_158957516.1|640822_641713_-	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	42.3	2.5e-37
WP_158958651.1|641716_643117_-	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	46.4	1.2e-52
WP_158957518.1|643149_643497_-	hypothetical protein	NA	A0A0U2I1S2	Escherichia_phage	49.6	6.8e-23
WP_158957520.1|643508_644153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957671.1|644330_645011_-	hypothetical protein	NA	A0A0U2JTX5	Escherichia_phage	42.0	5.6e-21
WP_158958653.1|645007_645781_-	hypothetical protein	NA	A0A0U2QL72	Escherichia_phage	31.1	3.9e-26
WP_158957526.1|646002_646281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957528.1|646282_647020_-	hypothetical protein	NA	A0A0U2JGI7	Escherichia_phage	37.0	1.2e-24
>prophage 5
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	656797	672900	1253746	terminase	Escherichia_phage(25.0%)	22	NA	NA
WP_158957684.1|656797_658699_-	NUDIX domain-containing protein	NA	A0A0U2QW61	Escherichia_phage	40.9	9.8e-39
WP_158957687.1|658756_659068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957689.1|659072_659909_-	hypothetical protein	NA	A0A0U2I1R8	Escherichia_phage	47.8	2.1e-62
WP_158957560.1|661368_662643_-	hypothetical protein	NA	A0A0U2JTW9	Escherichia_phage	39.3	4.7e-85
WP_158957562.1|662639_663101_-|terminase	terminase small subunit protein	terminase	F8TUR4	EBPR_podovirus	49.6	5.0e-29
WP_158957564.1|663257_663479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957566.1|664734_665031_-	hypothetical protein	NA	A0A2R2YAX9	Pseudomonas_phage	40.9	9.6e-10
WP_158957691.1|665397_666195_-	hypothetical protein	NA	A0A088F6J4	Enterobacteria_phage	36.8	1.7e-32
WP_158957693.1|666529_666874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957695.1|666888_667296_-	DUF2591 domain-containing protein	NA	F8TVJ2	EBPR_siphovirus	36.0	1.8e-06
WP_158957697.1|667279_667684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957699.1|667795_667975_-	hypothetical protein	NA	W0B4E9	Acinetobacter_phage	69.6	5.2e-11
WP_158957701.1|668055_668244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158958649.1|669113_669440_-	hypothetical protein	NA	A0A2I7RQI4	Vibrio_phage	49.5	3.2e-14
WP_158957578.1|669793_669979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957580.1|669965_670157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957582.1|670153_670339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957584.1|670335_670578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957703.1|670574_671222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158957586.1|671218_671632_-	hypothetical protein	NA	A0A088F6N3	Vibrio_phage	35.2	8.2e-07
WP_158957705.1|671941_672340_-	hypothetical protein	NA	K4NWL6	Pseudomonas_phage	46.7	2.5e-21
WP_158957707.1|672336_672900_-	AAA family ATPase	NA	A0A2I7RE66	Vibrio_phage	36.8	2.0e-24
>prophage 6
NZ_CP046916	Paraburkholderia sp. DHF22 chromosome 4, complete sequence	1253746	686396	691602	1253746	integrase	Pseudomonas_phage(33.33%)	10	689925:689940	698972:698987
WP_158957725.1|686396_686957_+	DUF551 domain-containing protein	NA	I6NVL3	Burkholderia_virus	74.5	1.6e-13
WP_158957639.1|686953_687340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957641.1|687389_687686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957643.1|687858_688227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957727.1|688223_688523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158957645.1|688522_688873_+	hypothetical protein	NA	A0A0U4KRZ0	Arthrobacter_phage	60.0	2.0e-06
WP_158957649.1|689215_689611_+	hypothetical protein	NA	J7HXK7	Pseudomonas_phage	40.6	8.3e-09
WP_158957651.1|689665_689863_+	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	34.4	2.8e-05
689925:689940	attL	CGGCTATTTCACGGCG	NA	NA	NA	NA
WP_158957729.1|689983_690937_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0U4JIT5	Pseudomonas_phage	31.8	1.0e-36
WP_158958655.1|691017_691602_+	hypothetical protein	NA	F2Y1V3	Organic_Lake_phycodnavirus	24.8	9.8e-06
698972:698987	attR	CGCCGTGAAATAGCCG	NA	NA	NA	NA
