assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009769185.1_ASM976918v1	NZ_CP039261	Lactobacillus johnsonii strain DC22.2 chromosome, complete genome	1	1117511-1117843	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas14k,cas2,cas3,cas14j,c2c9_V-U4,RT,DEDDh,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3	Type I-E	GGATCATCTCCACATACGTGGAGAATAC,GGATCATCTCCACATACGTGGAGAATAC,GGATCATCTCCACATACGTGGAGAATAC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	5,5,4	5	TypeI-E	cas14k,cas2,cas3,cas14j,c2c9_V-U4,RT,DEDDh,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3	NA|135aa|up_8|NZ_CP039261.1_1110212_1110617_-,NA|121aa|up_6|NZ_CP039261.1_1111044_1111407_-,NA|60aa|up_4|NZ_CP039261.1_1111804_1111984_-,NA|64aa|up_1|NZ_CP039261.1_1114371_1114563_-,NA	NA|38aa|up_9|NZ_CP039261.1_1109519_1109633_+	pfam13955, Fst_toxin, Toxin Fst, type I toxin-antitoxin system	NA|135aa|up_8|NZ_CP039261.1_1110212_1110617_-	NA	NA|145aa|up_7|NZ_CP039261.1_1110613_1111048_-	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component	NA|121aa|up_6|NZ_CP039261.1_1111044_1111407_-	NA	NA|131aa|up_5|NZ_CP039261.1_1111403_1111796_-	cd08055, gp15, Head-Tail Connector Protein gp15 of Bacteriophage SPP1 and similar proteins	NA|60aa|up_4|NZ_CP039261.1_1111804_1111984_-	NA	NA|408aa|up_3|NZ_CP039261.1_1112367_1113591_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|116aa|up_2|NZ_CP039261.1_1113933_1114281_-	pfam09639, YjcQ, YjcQ protein	NA|64aa|up_1|NZ_CP039261.1_1114371_1114563_-	NA	NA|367aa|up_0|NZ_CP039261.1_1116328_1117429_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	cas2|293aa|down_0|NZ_CP039261.1_1117914_1118793_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|313aa|down_1|NZ_CP039261.1_1118798_1119737_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_2|NZ_CP039261.1_1119739_1120387_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|237aa|down_3|NZ_CP039261.1_1120398_1121109_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|374aa|down_4|NZ_CP039261.1_1121089_1122211_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|down_5|NZ_CP039261.1_1122213_1122801_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|562aa|down_6|NZ_CP039261.1_1122829_1124515_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|917aa|down_7|NZ_CP039261.1_1124507_1127258_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|306aa|down_8|NZ_CP039261.1_1129466_1130384_-	cd07340, M48B_Htpx_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|142aa|down_9|NZ_CP039261.1_1130597_1131023_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p
GCF_009769185.1_ASM976918v1	NZ_CP039261	Lactobacillus johnsonii strain DC22.2 chromosome, complete genome	2	1127944-1129317	2,2,2,3	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas14k,cas2,cas3,cas14j,c2c9_V-U4,RT,DEDDh,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3	Type I-E	AGGATCATCTCCACTTACGTGGAGAATAC,GGATCATCTCCACTTACGTGGAGAATAC,GGATCATCTCCACTTACGTGGAGAATAC,AGGATCATCTCCACTTACGTGGAGAATAC	29,28,28,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	22,22,19,19	22	TypeI-E	cas14k,cas2,cas3,cas14j,c2c9_V-U4,RT,DEDDh,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3	NA|64aa|up_9|NZ_CP039261.1_1114371_1114563_-,NA|66aa|down_3|NZ_CP039261.1_1133230_1133428_-,NA|416aa|down_6|NZ_CP039261.1_1139086_1140334_+,NA|274aa|down_7|NZ_CP039261.1_1141563_1142385_-,NA|201aa|down_9|NZ_CP039261.1_1144164_1144767_-	NA|64aa|up_9|NZ_CP039261.1_1114371_1114563_-	NA	NA|367aa|up_8|NZ_CP039261.1_1116328_1117429_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	cas2|293aa|up_7|NZ_CP039261.1_1117914_1118793_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|313aa|up_6|NZ_CP039261.1_1118798_1119737_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|up_5|NZ_CP039261.1_1119739_1120387_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|237aa|up_4|NZ_CP039261.1_1120398_1121109_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|374aa|up_3|NZ_CP039261.1_1121089_1122211_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|up_2|NZ_CP039261.1_1122213_1122801_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|562aa|up_1|NZ_CP039261.1_1122829_1124515_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|917aa|up_0|NZ_CP039261.1_1124507_1127258_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|306aa|down_0|NZ_CP039261.1_1129466_1130384_-	cd07340, M48B_Htpx_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|142aa|down_1|NZ_CP039261.1_1130597_1131023_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|350aa|down_2|NZ_CP039261.1_1131800_1132850_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|66aa|down_3|NZ_CP039261.1_1133230_1133428_-	NA	NA|756aa|down_4|NZ_CP039261.1_1135542_1137810_-	cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins	NA|348aa|down_5|NZ_CP039261.1_1137809_1138853_-	pfam00004, AAA, ATPase family associated with various cellular activities (AAA)	NA|416aa|down_6|NZ_CP039261.1_1139086_1140334_+	NA	NA|274aa|down_7|NZ_CP039261.1_1141563_1142385_-	NA	NA|457aa|down_8|NZ_CP039261.1_1142635_1144006_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|201aa|down_9|NZ_CP039261.1_1144164_1144767_-	NA
