The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046848	Vibrio cincinnatiensis strain F8054 chromosome 1, complete sequence	2768337	158259	165027	2768337		Escherichia_phage(66.67%)	6	NA	NA
WP_154114719.1|158259_159267_+	substrate-binding domain-containing protein	NA	C6ZCU4	Enterobacteria_phage	28.7	1.6e-27
WP_154114720.1|159281_160424_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.3	1.0e-46
WP_078925725.1|160452_161034_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	37.0	2.2e-26
WP_154114721.1|161102_161948_-	dimethylsulfoxide reductase	NA	A0A077SK59	Escherichia_phage	36.4	1.9e-26
WP_078925723.1|161949_162564_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	64.9	3.6e-83
WP_154114722.1|162579_165027_-	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	47.9	4.3e-212
>prophage 2
NZ_CP046848	Vibrio cincinnatiensis strain F8054 chromosome 1, complete sequence	2768337	218963	226097	2768337		Anguillid_herpesvirus(16.67%)	9	NA	NA
WP_078925694.1|218963_219398_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	39.2	1.1e-22
WP_078925693.1|219480_220773_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	39.9	1.9e-33
WP_078925692.1|220972_221167_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_078925691.1|221226_221565_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_078925690.1|221575_223429_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	39.3	2.0e-108
WP_154114743.1|223450_223966_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_078925688.1|224077_224401_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	53.3	5.5e-27
WP_078925687.1|224462_224846_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	77.4	1.2e-52
WP_154114744.1|224882_226097_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.7	2.2e-31
>prophage 3
NZ_CP046848	Vibrio cincinnatiensis strain F8054 chromosome 1, complete sequence	2768337	416040	423190	2768337		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_154114820.1|416040_416931_+	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	42.1	2.3e-59
WP_078927352.1|417154_419737_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	25.4	7.9e-31
WP_154114822.1|419800_420790_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.6	1.5e-35
WP_154114823.1|420856_421804_-	murein hydrolase activator NlpD	NA	I2E8W3	Clostridium_phage	33.1	4.8e-10
WP_078927349.1|421803_422430_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	1.5e-36
WP_078927348.1|422434_423190_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.4	2.4e-65
>prophage 4
NZ_CP046848	Vibrio cincinnatiensis strain F8054 chromosome 1, complete sequence	2768337	1585439	1592028	2768337		Staphylococcus_phage(66.67%)	7	NA	NA
WP_154115338.1|1585439_1586573_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.9	4.3e-66
WP_154115339.1|1586584_1587835_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	48.2	3.7e-95
WP_078925473.1|1587967_1588417_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_154115340.1|1588431_1589532_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.8	4.5e-44
WP_078925469.1|1589543_1590200_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	36.1	2.2e-30
WP_078925468.1|1590257_1591367_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	39.0	2.0e-60
WP_078925467.1|1591557_1592028_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	2.9e-32
>prophage 1
NZ_CP046849	Vibrio cincinnatiensis strain F8054 chromosome 2, complete sequence	1034285	158	46421	1034285	protease,transposase	Shigella_phage(55.56%)	57	NA	NA
WP_158147654.1|158_1010_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.7	2.0e-55
WP_154116360.1|1070_1589_+	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_154116358.1|1742_2162_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_154116356.1|2317_2698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116354.1|2846_3323_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_154116352.1|3289_3430_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_154116350.1|3481_3895_+	GFA family protein	NA	NA	NA	NA	NA
WP_154116348.1|4038_4563_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_083544871.1|4603_4693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116346.1|4710_5247_+	hypothetical protein	NA	A0A076YJ58	Mesorhizobium_phage	31.1	6.9e-06
WP_154116344.1|5934_6555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116342.1|6562_7255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116340.1|7544_7919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116916.1|7918_8161_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116248.1|9384_9732_+	DUF3024 domain-containing protein	NA	E7C9Q9	Salmonella_phage	39.7	1.3e-18
WP_154116338.1|9901_10261_+	VOC family protein	NA	NA	NA	NA	NA
WP_154116914.1|10454_10967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147655.1|11987_12839_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	43.1	1.2e-55
WP_078927640.1|12980_13268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116336.1|13412_13868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116334.1|13857_14307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116912.1|14303_14414_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_154116332.1|14442_15369_-|protease	CAAX protease	protease	NA	NA	NA	NA
WP_158147655.1|17141_17993_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	43.1	1.2e-55
WP_065818886.1|18043_18502_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000417044.1|19152_19725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080289624.1|20189_20315_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_039428516.1|20360_20660_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_039428513.1|20668_20911_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_154116328.1|21626_22100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116910.1|22081_22207_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_154116312.1|22341_23466_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_154116326.1|25599_26013_+	GFA family protein	NA	NA	NA	NA	NA
WP_143680071.1|26827_26917_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_154116324.1|27453_27867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116322.1|28022_28382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116908.1|28585_29482_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116320.1|29676_30300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116282.1|30445_30838_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_154116318.1|31073_32060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116906.1|34495_34891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116316.1|35050_35410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116314.1|35559_36867_+	DUF3644 domain-containing protein	NA	A0A220NQR4	Corynebacterium_phage	24.6	7.0e-20
WP_001080654.1|37046_37217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000351248.1|37216_37618_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A222YZ88	Escherichia_phage	29.8	9.4e-08
WP_154116904.1|37620_37731_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_000843587.1|37798_38131_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000071008.1|38117_38432_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_053339486.1|39218_39515_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_154116312.1|40321_41446_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_154116310.1|41517_41982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116308.1|42113_42548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147655.1|43043_43895_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	43.1	1.2e-55
WP_154116304.1|43943_44378_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_154116302.1|44454_44772_-	plasmid maintenance protein CcdB	NA	NA	NA	NA	NA
WP_099609954.1|44771_45017_-	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
WP_158147656.1|45569_46421_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.7	2.2e-54
>prophage 2
NZ_CP046849	Vibrio cincinnatiensis strain F8054 chromosome 2, complete sequence	1034285	54207	97493	1034285	integrase,transposase	Shigella_phage(20.0%)	44	59201:59260	100110:100678
WP_154116286.1|54207_55236_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_072669385.1|55668_56067_+	aegerolysin	NA	NA	NA	NA	NA
WP_154116903.1|56129_56246_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_055030603.1|56282_56678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116900.1|56674_56791_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_154116284.1|57431_58028_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_154116282.1|58175_58568_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
59201:59260	attL	GCGTTATGTACTTTTTCTAAAAATAACCTAGTCAACAGATGAGAACTAGTCGTAAACTTC	NA	NA	NA	NA
WP_154116248.1|59286_59634_+	DUF3024 domain-containing protein	NA	E7C9Q9	Salmonella_phage	39.7	1.3e-18
WP_154116885.1|59633_59759_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_158147655.1|60145_60997_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	43.1	1.2e-55
WP_154116280.1|63192_64407_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0S2SYQ7	Pseudomonas_phage	31.4	9.4e-27
WP_154116278.1|64768_65740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116898.1|65830_66067_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_154116276.1|66059_66311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116274.1|66307_67855_+	replication endonuclease	NA	F1BUS0	Erwinia_phage	41.6	1.8e-75
WP_140117497.1|68122_69272_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	41.2	4.0e-51
WP_154116272.1|69534_71685_+	hypothetical protein	NA	A5LH58	Enterobacteria_phage	32.9	1.7e-103
WP_078927570.1|71982_72555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078927571.1|72551_73259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154116896.1|74052_74646_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_154116270.1|75278_75971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039428510.1|77118_77853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147657.1|77876_77969_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_115173891.1|78544_79060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147658.1|79149_79839_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_158147659.1|80471_80945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147660.1|81101_81641_+	DUF4238 domain-containing protein	NA	NA	NA	NA	NA
WP_158147661.1|81934_82249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147662.1|82514_83729_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0S2SYQ7	Pseudomonas_phage	32.1	9.4e-27
WP_158147663.1|84090_85062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116898.1|85152_85389_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_154116276.1|85381_85633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158147664.1|85629_87198_+	replication endonuclease	NA	F1BUS0	Erwinia_phage	41.9	3.4e-77
WP_154116893.1|87314_88193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078927568.1|88192_88678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116891.1|89317_90331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154116262.1|90314_91256_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	32.2	6.4e-23
WP_154116260.1|91373_93107_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_158147665.1|94127_94598_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_154116258.1|94734_95352_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_154116256.1|95557_95851_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_154116254.1|95847_96135_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_154116889.1|96144_96255_+	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_158147666.1|96641_97493_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.0	5.7e-55
100110:100678	attR	GCGTTATGTACTTTTTCTAAAAATAACCTAGTCAACAGATGAGAACTAGTCGTAAACTTCTGACTTGAACTCGTGGGGTAATAGATATGGCATTCTCAGAAATTGAACAAAAGCGCTACGAAAAGGCAGTGGAAAAGTATCTCGAAACTAGCCGACCACCAGTAGAAATTCGAGATCAAGTTGATATTGGCTATCGTCTAGATGGGCAGGCAATCGAAATTTTCGAAATACGTCCTAGATGGAATGATCCATCAGAAAAAATTGAACATCCAGTAGCGAGAGTTAAATACTACAAATCGCGGGACGAATGGAAAATTTATTGGATGAAATCAGATTTAAAATGGCATGTATACGAACCGATTCCTGAAGTTAAATTTCTAGAGGTTTTCTTTGATATATTACAAGACGATGCTTACGGCTGTTTCTGGGGATAATCTCAACCACGTACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTTTTACTATGCGTTGGTTTTTGTGTTTACGGTGTTATGCGGAAAGTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTA	NA	NA	NA	NA
