The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046779	Vibrio parahaemolyticus strain 2014V-1066 chromosome 1, complete sequence	3323763	1265286	1271988	3323763		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|1265286_1266426_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_005496257.1|1266443_1267694_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	3.6e-98
WP_005482986.1|1267821_1268271_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_005496256.1|1268278_1269403_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	1.8e-48
WP_005496255.1|1269415_1270069_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.0	2.1e-33
WP_005496254.1|1270238_1271348_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005440184.1|1271517_1271988_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NZ_CP046779	Vibrio parahaemolyticus strain 2014V-1066 chromosome 1, complete sequence	3323763	1696445	1706259	3323763	tRNA	Mycobacterium_phage(16.67%)	7	NA	NA
WP_005495766.1|1696445_1699532_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.9	3.8e-88
WP_005460060.1|1699606_1700233_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_005495763.1|1700239_1701589_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	42.1	1.1e-84
WP_005495761.1|1701680_1702988_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	42.8	2.2e-90
WP_023650089.1|1703190_1704090_+	DUF3380 domain-containing protein	NA	K4RM41	Pseudomonas_phage	43.0	4.8e-36
WP_005495751.1|1704642_1704909_+	DksA/TraR family C4-type zinc finger protein	NA	A0A1S6UBD1	Serratia_phage	48.9	2.1e-16
WP_005495749.1|1704978_1706259_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.4	2.5e-22
>prophage 3
NZ_CP046779	Vibrio parahaemolyticus strain 2014V-1066 chromosome 1, complete sequence	3323763	1978054	1986890	3323763		Vibrio_phage(25.0%)	13	NA	NA
WP_079749494.1|1978054_1978852_-	helix-turn-helix domain-containing protein	NA	G9L676	Escherichia_phage	37.2	2.1e-22
WP_005495417.1|1978823_1979075_+	hypothetical protein	NA	A0A1I9KFF6	Aeromonas_phage	41.9	3.8e-07
WP_005495415.1|1979094_1979559_+	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.0	3.0e-18
WP_005495414.1|1979555_1979774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495412.1|1979839_1980793_+	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.3	3.8e-39
WP_005495410.1|1980789_1981170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495408.1|1981162_1981813_+	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	36.5	7.0e-21
WP_005495406.1|1981809_1981992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495404.1|1981981_1982383_+	NinG recombination protein/bacteriophage lambda NinG family protein	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_005495402.1|1982419_1982827_+	APSE-2 prophage; Q protein	NA	NA	NA	NA	NA
WP_005495400.1|1983049_1983253_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005483265.1|1984157_1984370_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	2.9e-16
WP_005495398.1|1984664_1986890_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.7	8.2e-61
>prophage 4
NZ_CP046779	Vibrio parahaemolyticus strain 2014V-1066 chromosome 1, complete sequence	3323763	3273348	3290746	3323763	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_005455546.1|3273348_3275931_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
WP_005493947.1|3276073_3276541_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005478550.1|3276664_3277708_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_005493945.1|3277908_3278391_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	2.9e-27
WP_005493944.1|3278475_3281037_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.9	4.4e-34
WP_005455560.1|3282186_3283110_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|3283124_3283751_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_005493942.1|3283750_3284527_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	6.6e-66
WP_005493940.1|3284526_3285570_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005493937.1|3285616_3286093_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_005493934.1|3286110_3286815_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	24.3	3.4e-05
WP_005455577.1|3286816_3287098_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|3287725_3289027_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455581.1|3289105_3290746_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
>prophage 1
NZ_CP046780	Vibrio parahaemolyticus strain 2014V-1066 chromosome 2, complete sequence	1835171	975964	1027416	1835171	integrase,transposase,protease	Vibrio_phage(37.5%)	44	1006494:1006518	1021373:1021397
WP_005499394.1|975964_977257_-|protease	serine protease	protease	V5LS29	Emiliania_huxleyi_virus	22.7	4.5e-11
WP_005499396.1|977492_977897_-	cell division protein DamX	NA	NA	NA	NA	NA
WP_005499397.1|978183_979353_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	45.6	3.4e-82
WP_011106462.1|979989_980292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499399.1|980779_981637_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA	NA
WP_005499401.1|981849_982416_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005499403.1|982515_983049_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_005499405.1|983297_983480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499407.1|983563_984403_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005499413.1|986410_987001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499414.1|987183_987903_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_101893994.1|988046_988160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079451942.1|988171_988981_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_079748673.1|988977_989925_-	zinc ABC transporter solute-binding protein	NA	NA	NA	NA	NA
WP_005499420.1|989896_991039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079748682.1|991278_991902_+	cupin	NA	NA	NA	NA	NA
WP_025548618.1|993598_994240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005499427.1|994232_994547_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_021448349.1|996335_997256_-|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	88.5	2.3e-158
WP_005499450.1|999783_1000308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499452.1|1000524_1000893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021448345.1|1002262_1004089_-	cell motility protein	NA	NA	NA	NA	NA
WP_011106469.1|1004361_1004457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023650135.1|1004760_1005330_-	thermostable direct hemolysin TDH	NA	NA	NA	NA	NA
WP_021448344.1|1005543_1006464_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	91.1	1.2e-162
1006494:1006518	attL	TCTGACCGAATTACGCAACAAAGCC	NA	NA	NA	NA
WP_080332365.1|1007408_1007684_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_005499462.1|1007878_1008517_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_020842398.1|1008525_1009191_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_005499466.1|1009218_1009698_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_005499467.1|1009752_1011456_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_005499468.1|1011452_1011776_-	urease subunit beta	NA	NA	NA	NA	NA
WP_005499469.1|1011786_1012089_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_005499470.1|1012106_1012949_-	urease accessory protein ureD	NA	NA	NA	NA	NA
WP_005499471.1|1013354_1014893_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023650108.1|1014883_1015852_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005499475.1|1015868_1016669_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005499477.1|1016656_1017349_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	24.3	9.8e-05
WP_005499478.1|1017345_1017972_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	27.3	1.8e-05
WP_005499480.1|1018118_1018967_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005499483.1|1019403_1019973_+	TDH-related hemolysin TRH1	NA	NA	NA	NA	NA
WP_021448339.1|1020297_1021188_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	86.9	1.6e-153
WP_100198882.1|1021412_1022315_-	OspB protein	NA	A0A0P0ZCT1	Stx2-converting_phage	35.3	1.2e-29
1021373:1021397	attR	GGCTTTGTTGCGTAATTCGGTCAGA	NA	NA	NA	NA
WP_005499492.1|1022530_1022935_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_021448338.1|1023045_1027416_-|protease	SslE/AcfD family lipoprotein zinc metalloprotease	protease	NA	NA	NA	NA
