assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009763485.1_ASM976348v1	NZ_CP046815	Vibrio cincinnatiensis strain 1398-82 chromosome 1, complete sequence	1	374560-375787	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1	Type I-F	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	20,20,19	20	TypeI-F	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1,RT	NA,NA	NA|139aa|up_9|NZ_CP046815.1_365147_365564_-	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|150aa|up_8|NZ_CP046815.1_365717_366167_-	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|82aa|up_7|NZ_CP046815.1_366172_366418_-	PRK11130, moaD, molybdopterin synthase small subunit; Provisional	NA|160aa|up_6|NZ_CP046815.1_366414_366894_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|171aa|up_5|NZ_CP046815.1_366904_367417_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|335aa|up_4|NZ_CP046815.1_367469_368474_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|297aa|up_3|NZ_CP046815.1_368762_369653_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|113aa|up_2|NZ_CP046815.1_369645_369984_-	pfam01627, Hpt, Hpt domain	NA|455aa|up_1|NZ_CP046815.1_369990_371355_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|677aa|up_0|NZ_CP046815.1_371685_373716_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	cas6f|213aa|down_0|NZ_CP046815.1_375942_376581_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|321aa|down_1|NZ_CP046815.1_376591_377554_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|392aa|down_2|NZ_CP046815.1_377572_378748_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|495aa|down_3|NZ_CP046815.1_378744_380229_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3-cas2|1130aa|down_4|NZ_CP046815.1_380218_383608_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|330aa|down_5|NZ_CP046815.1_383604_384594_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|345aa|down_6|NZ_CP046815.1_384981_386016_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|345aa|down_7|NZ_CP046815.1_387077_388112_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|290aa|down_8|NZ_CP046815.1_388743_389613_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|402aa|down_9|NZ_CP046815.1_389688_390894_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]
GCF_009763485.1_ASM976348v1	NZ_CP046816	Vibrio cincinnatiensis strain 1398-82 chromosome 2, complete sequence	1	164907-165052	1	PILER-CR	no		DEDDh,RT	Orphan	AATGACAATAAAGTTTGAAACTTTT	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1,RT	NA|92aa|up_1|NZ_CP046816.1_162656_162932_-,NA|137aa|down_6|NZ_CP046816.1_173228_173639_-,NA|114aa|down_9|NZ_CP046816.1_175746_176088_-	NA|412aa|up_9|NZ_CP046816.1_152411_153647_-	cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase	NA|531aa|up_8|NZ_CP046816.1_154919_156512_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|394aa|up_7|NZ_CP046816.1_156523_157705_-	PRK08310, PRK08310, amidase; Provisional	NA|338aa|up_6|NZ_CP046816.1_157803_158817_-	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137)	NA|273aa|up_5|NZ_CP046816.1_158858_159677_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|243aa|up_4|NZ_CP046816.1_159696_160425_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|217aa|up_3|NZ_CP046816.1_160411_161062_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|223aa|up_2|NZ_CP046816.1_161074_161743_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|92aa|up_1|NZ_CP046816.1_162656_162932_-	NA	NA|407aa|up_0|NZ_CP046816.1_163227_164448_+	PRK09692, PRK09692, integrase; Provisional	NA|147aa|down_0|NZ_CP046816.1_165233_165674_-	COG3019, COG3019, Predicted metal-binding protein [General function prediction only]	NA|187aa|down_1|NZ_CP046816.1_165693_166254_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|185aa|down_2|NZ_CP046816.1_166272_166827_-	cd04211, Cupredoxin_like_2, Uncharacterized Cupredoxin-like subfamily	NA|1042aa|down_3|NZ_CP046816.1_166896_170022_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|578aa|down_4|NZ_CP046816.1_170021_171755_-	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion	NA|464aa|down_5|NZ_CP046816.1_171744_173136_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|137aa|down_6|NZ_CP046816.1_173228_173639_-	NA	NA|440aa|down_7|NZ_CP046816.1_173716_175036_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|228aa|down_8|NZ_CP046816.1_175032_175716_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|114aa|down_9|NZ_CP046816.1_175746_176088_-	NA
GCF_009763485.1_ASM976348v1	NZ_CP046816	Vibrio cincinnatiensis strain 1398-82 chromosome 2, complete sequence	2	289657-290705	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	RT	DEDDh,RT	Unclear	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	17,17,17	17	Orphan	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1,RT	NA|191aa|up_8|NZ_CP046816.1_279244_279817_+,NA|717aa|up_7|NZ_CP046816.1_280114_282265_-,NA|162aa|up_6|NZ_CP046816.1_282707_283193_-,NA|293aa|up_5|NZ_CP046816.1_283192_284071_-,NA|84aa|up_3|NZ_CP046816.1_285752_286004_-,NA|324aa|up_1|NZ_CP046816.1_286311_287283_-,NA|191aa|down_1|NZ_CP046816.1_292156_292729_+,NA|84aa|down_5|NZ_CP046816.1_298344_298596_-,NA|324aa|down_7|NZ_CP046816.1_298915_299887_-	NA|236aa|up_9|NZ_CP046816.1_278540_279248_+	pfam14412, AHH, A nuclease family of the HNH/ENDO VII superfamily with conserved AHH	NA|191aa|up_8|NZ_CP046816.1_279244_279817_+	NA	NA|717aa|up_7|NZ_CP046816.1_280114_282265_-	NA	NA|162aa|up_6|NZ_CP046816.1_282707_283193_-	NA	NA|293aa|up_5|NZ_CP046816.1_283192_284071_-	NA	NA|523aa|up_4|NZ_CP046816.1_284187_285756_-	pfam05840, Phage_GPA, Bacteriophage replication gene A protein (GPA)	NA|84aa|up_3|NZ_CP046816.1_285752_286004_-	NA	NA|79aa|up_2|NZ_CP046816.1_285996_286233_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|324aa|up_1|NZ_CP046816.1_286311_287283_-	NA	NA|402aa|up_0|NZ_CP046816.1_287633_288839_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|236aa|down_0|NZ_CP046816.1_291452_292160_+	pfam14412, AHH, A nuclease family of the HNH/ENDO VII superfamily with conserved AHH	NA|191aa|down_1|NZ_CP046816.1_292156_292729_+	NA	NA|783aa|down_2|NZ_CP046816.1_293192_295541_-	COG1204, COG1204, Superfamily II helicase [General function prediction only]	NA|300aa|down_3|NZ_CP046816.1_295507_296407_-	pfam08878, DUF1837, Domain of unknown function (DUF1837)	NA|516aa|down_4|NZ_CP046816.1_296800_298348_-	pfam05840, Phage_GPA, Bacteriophage replication gene A protein (GPA)	NA|84aa|down_5|NZ_CP046816.1_298344_298596_-	NA	NA|79aa|down_6|NZ_CP046816.1_298588_298825_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|324aa|down_7|NZ_CP046816.1_298915_299887_-	NA	NA|287aa|down_8|NZ_CP046816.1_300248_301109_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|380aa|down_9|NZ_CP046816.1_301089_302229_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated
GCF_009763485.1_ASM976348v1	NZ_CP046816	Vibrio cincinnatiensis strain 1398-82 chromosome 2, complete sequence	3	316704-317198	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	RT	DEDDh,RT	Unclear	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	8,8,7	8	Orphan	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1,RT	NA|47aa|up_7|NZ_CP046816.1_310221_310362_-,NA|278aa|up_6|NZ_CP046816.1_310310_311144_-,NA|100aa|down_3|NZ_CP046816.1_318429_318729_-,NA|101aa|down_6|NZ_CP046816.1_322245_322548_-,NA|52aa|down_7|NZ_CP046816.1_322548_322704_-,NA|140aa|down_8|NZ_CP046816.1_322864_323284_-	NA|91aa|up_9|NZ_CP046816.1_309434_309707_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|166aa|up_8|NZ_CP046816.1_309703_310201_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|47aa|up_7|NZ_CP046816.1_310221_310362_-	NA	NA|278aa|up_6|NZ_CP046816.1_310310_311144_-	NA	NA|282aa|up_5|NZ_CP046816.1_311143_311989_-	cd17440, MFS_SV2C, Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters	NA|325aa|up_4|NZ_CP046816.1_312160_313135_-	smart00901, FRG, This domain contains a conserved N-terminal (F/Y)RG motif	NA|284aa|up_3|NZ_CP046816.1_313183_314035_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|138aa|up_2|NZ_CP046816.1_314539_314953_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|41aa|up_1|NZ_CP046816.1_315459_315582_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|138aa|up_0|NZ_CP046816.1_315619_316033_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|37aa|down_0|NZ_CP046816.1_317355_317466_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|145aa|down_1|NZ_CP046816.1_317462_317897_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|32aa|down_2|NZ_CP046816.1_317911_318007_-	cd16147, G6S, glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)	NA|100aa|down_3|NZ_CP046816.1_318429_318729_-	NA	NA|284aa|down_4|NZ_CP046816.1_319395_320247_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|39aa|down_5|NZ_CP046816.1_322132_322249_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|101aa|down_6|NZ_CP046816.1_322245_322548_-	NA	NA|52aa|down_7|NZ_CP046816.1_322548_322704_-	NA	NA|140aa|down_8|NZ_CP046816.1_322864_323284_-	NA	NA|69aa|down_9|NZ_CP046816.1_323285_323492_-	pfam01527, HTH_Tnp_1, Transposase
GCF_009763485.1_ASM976348v1	NZ_CP046816	Vibrio cincinnatiensis strain 1398-82 chromosome 2, complete sequence	4	371755-372443	4,3,3	PILER-CR,CRISPRCasFinder,CRT	no	RT	DEDDh,RT	Unclear	TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	11,11,11	11	Orphan	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,csa3,cas3,csx1,RT	NA|256aa|up_9|NZ_CP046816.1_359896_360664_-,NA|186aa|up_3|NZ_CP046816.1_366042_366600_+,NA|63aa|up_2|NZ_CP046816.1_366723_366912_+,NA|30aa|down_0|NZ_CP046816.1_372589_372679_-,NA|128aa|down_3|NZ_CP046816.1_374627_375011_-,NA|125aa|down_7|NZ_CP046816.1_377908_378283_-	NA|256aa|up_9|NZ_CP046816.1_359896_360664_-	NA	NA|378aa|up_8|NZ_CP046816.1_360705_361839_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	RT|442aa|up_7|NZ_CP046816.1_362073_363399_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|93aa|up_6|NZ_CP046816.1_364474_364753_+	pfam04221, RelB, RelB antitoxin	NA|90aa|up_5|NZ_CP046816.1_364745_365015_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|236aa|up_4|NZ_CP046816.1_365149_365857_-	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|186aa|up_3|NZ_CP046816.1_366042_366600_+	NA	NA|63aa|up_2|NZ_CP046816.1_366723_366912_+	NA	NA|284aa|up_1|NZ_CP046816.1_367637_368489_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|200aa|up_0|NZ_CP046816.1_369472_370072_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|30aa|down_0|NZ_CP046816.1_372589_372679_-	NA	NA|141aa|down_1|NZ_CP046816.1_372883_373306_-	pfam18648, ADPRTs_Tse2, Tse2 ADP-ribosyltransferase toxins	NA|343aa|down_2|NZ_CP046816.1_373549_374578_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|128aa|down_3|NZ_CP046816.1_374627_375011_-	NA	NA|277aa|down_4|NZ_CP046816.1_375157_375988_-	pfam14022, DUF4238, Protein of unknown function (DUF4238)	NA|284aa|down_5|NZ_CP046816.1_376037_376889_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|59aa|down_6|NZ_CP046816.1_377735_377912_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|125aa|down_7|NZ_CP046816.1_377908_378283_-	NA	NA|401aa|down_8|NZ_CP046816.1_378440_379643_-	pfam18740, EC042_2821, EC042_2821-lke REase	NA|371aa|down_9|NZ_CP046816.1_379786_380899_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
