The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046761	Vibrio parahaemolyticus strain AM46865 chromosome 1, complete sequence	3284504	365664	382847	3284504	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_005455581.1|365664_367305_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
WP_005455579.1|367383_368685_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455577.1|369098_369380_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005487195.1|369381_370086_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	23.6	2.6e-05
WP_005380896.1|370103_370580_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_158113708.1|370626_371670_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005478553.1|371669_372446_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	5.0e-66
WP_005455562.1|372445_373072_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_005455560.1|373086_374010_+	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_158113711.1|375158_377720_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.7	1.3e-33
WP_025795578.1|377804_378287_+	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	2.9e-27
WP_023623298.1|378487_379531_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_005455548.1|379654_380122_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_140095445.1|380264_382847_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
>prophage 2
NZ_CP046761	Vibrio parahaemolyticus strain AM46865 chromosome 1, complete sequence	3284504	1392235	1401105	3284504	coat	Vibrio_phage(100.0%)	14	NA	NA
WP_140347371.1|1392235_1393378_-	assembly protein	NA	O88128	Vibrio_phage	98.9	1.1e-213
WP_158113909.1|1393374_1393689_-	DUF2523 domain-containing protein	NA	O88125	Vibrio_phage	99.0	1.8e-46
WP_158113912.1|1393690_1395166_-	methyl-accepting chemotaxis protein	NA	O88107	Vibrio_phage	99.2	2.3e-221
WP_015975175.1|1395299_1395533_-|coat	major coat protein	coat	O88142	Vibrio_phage	100.0	1.0e-30
WP_015975174.1|1395543_1395789_-	hypothetical protein	NA	A0A1W6UH23	Vibrio_phage	100.0	1.2e-37
WP_158113915.1|1395800_1396154_-	DUF1293 domain-containing protein	NA	O88148	Vibrio_phage	98.3	1.9e-60
WP_158113918.1|1396157_1397366_-	phage replication protein	NA	Q7DKP2	Vibrio_phage	99.8	1.2e-244
WP_025526117.1|1397289_1397505_-	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	97.2	4.5e-33
WP_158113921.1|1397507_1397780_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158113923.1|1397903_1398272_+	hypothetical protein	NA	Q9MCC3	Vibrio_phage	89.8	1.2e-54
WP_021448543.1|1398280_1398547_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_021448542.1|1398689_1398881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140070698.1|1398877_1399252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158113925.1|1399248_1401105_+	hypothetical protein	NA	A0A2I7RNF8	Vibrio_phage	43.0	7.7e-113
>prophage 3
NZ_CP046761	Vibrio parahaemolyticus strain AM46865 chromosome 1, complete sequence	3284504	1657222	1671139	3284504		Vibrio_phage(40.0%)	17	NA	NA
WP_005495398.1|1657222_1659448_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.7	8.2e-61
WP_005483265.1|1659742_1659955_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	2.9e-16
WP_005483162.1|1660861_1661065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495402.1|1661287_1661695_-	APSE-2 prophage; Q protein	NA	NA	NA	NA	NA
WP_005495404.1|1661731_1662133_-	NinG recombination protein/bacteriophage lambda NinG family protein	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_005495406.1|1662122_1662305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065766468.1|1662301_1662952_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	36.5	7.0e-21
WP_065766470.1|1662944_1663325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071161315.1|1663321_1664275_-	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.7	2.2e-39
WP_005495414.1|1664340_1664559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495415.1|1664555_1665020_-	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.0	3.0e-18
WP_021486590.1|1665039_1665261_-	helix-turn-helix transcriptional regulator	NA	A0A1P8DTF8	Proteus_phage	40.6	2.8e-06
WP_071161314.1|1665369_1666038_+	helix-turn-helix domain-containing protein	NA	A0A1V0E8B5	Vibrio_phage	57.1	1.9e-66
WP_127463331.1|1666749_1666929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080524852.1|1666941_1670106_+	hypothetical protein	NA	I3PUZ3	Vibrio_phage	33.6	1.1e-23
WP_021453095.1|1670098_1670626_+	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_021453797.1|1670950_1671139_+	hypothetical protein	NA	F6LQB8	Bdellovibrio_phage	52.8	8.8e-09
>prophage 4
NZ_CP046761	Vibrio parahaemolyticus strain AM46865 chromosome 1, complete sequence	3284504	2393955	2400657	3284504		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005440184.1|2393955_2394426_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
WP_020840184.1|2394595_2395705_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	2.0e-63
WP_005483039.1|2395874_2396528_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_069506310.1|2396540_2397665_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	6.9e-48
WP_005482986.1|2397672_2398122_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_025508739.1|2398249_2399500_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	3.6e-98
WP_100662159.1|2399517_2400657_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.0e-62
>prophage 1
NZ_CP046762	Vibrio parahaemolyticus strain AM46865 chromosome 2, complete sequence	1804180	399168	409940	1804180	coat	Vibrio_phage(75.0%)	10	NA	NA
WP_158114160.1|399168_399537_-	hypothetical protein	NA	Q858Q3	Vibrio_phage	72.0	3.1e-42
WP_005389161.1|399721_400024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031778509.1|400023_402054_+	replication endonuclease	NA	A0A0F6YPA7	Vibrio_phage	53.2	1.4e-197
WP_005389159.1|402137_402443_+	hypothetical protein	NA	Q2PZB5	Vibrio_virus	51.0	1.1e-19
WP_025506202.1|402713_402977_+	hypothetical protein	NA	R9TI50	Vibrio_phage	41.7	1.5e-06
WP_024701224.1|404679_405039_+|coat	minor coat protein	coat	R9TIT8	Vibrio_phage	45.6	4.6e-22
WP_029830241.1|405038_406112_+	hypothetical protein	NA	O80263	Vibrio_phage	63.1	2.1e-126
WP_025522920.1|406129_407482_+	type II secretory pathway protein	NA	R9TEZ5	Vibrio_phage	57.2	3.0e-122
WP_031777856.1|407521_408160_-	DUF2726 domain-containing protein	NA	NA	NA	NA	NA
WP_031777857.1|408356_409940_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	29.0	4.1e-30
>prophage 2
NZ_CP046762	Vibrio parahaemolyticus strain AM46865 chromosome 2, complete sequence	1804180	685220	704224	1804180	head,capsid,tail,portal,terminase	Vibrio_phage(76.19%)	28	NA	NA
WP_053048186.1|685220_685484_-	hypothetical protein	NA	A0A2I7RNJ9	Vibrio_phage	78.3	2.0e-30
WP_025558379.1|685480_685717_-	hypothetical protein	NA	A0A1D9C9R8	Salinivibrio_phage	42.7	1.0e-09
WP_025558380.1|685719_685950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025558381.1|685949_686459_-	hypothetical protein	NA	A0A2I7S7C4	Vibrio_phage	41.7	1.9e-21
WP_025558382.1|686455_686665_-	molecular chaperone DnaK	NA	A0A2I7RNJ6	Vibrio_phage	70.6	2.0e-17
WP_025558383.1|686692_687148_-	DUF2597 family protein	NA	A0A2I7RNI0	Vibrio_phage	94.0	8.3e-77
WP_069484948.1|687151_688282_-	DUF2586 family protein	NA	A0A2I7RNI8	Vibrio_phage	86.7	2.6e-188
WP_069484947.1|688297_688954_-	virion morphogenesis protein	NA	A0A2I7RNI6	Vibrio_phage	87.6	1.0e-104
WP_053048192.1|688937_689432_-|tail	phage tail protein	tail	A0A2I7RNH2	Vibrio_phage	93.2	2.4e-82
WP_025558387.1|689428_689848_-|head	head protein	head	A0A2I7RNH7	Vibrio_phage	61.2	9.4e-43
WP_025558388.1|689969_690680_-|terminase	terminase	terminase	A0A2I7RNJ0	Vibrio_phage	55.8	4.7e-71
WP_025558389.1|690683_691688_-|capsid	phage major capsid protein, P2 family	capsid	R9TPZ5	Vibrio_phage	59.3	5.8e-99
WP_069484946.1|691687_692569_-|capsid	phage capsid protein	capsid	A0A2I7RNH1	Vibrio_phage	63.1	4.5e-87
WP_069484945.1|694528_695536_+|portal	phage portal protein	portal	A0A1D9C9P9	Salinivibrio_phage	60.4	4.5e-115
WP_025558391.1|696054_697155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071936904.1|697212_697464_+	ogr/Delta-like zinc finger family protein	NA	R9TNQ2	Vibrio_phage	73.5	1.7e-28
WP_025558392.1|697414_698398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025558393.1|698406_698625_-	hypothetical protein	NA	Q8HA64	Vibrio_phage	58.3	1.1e-13
WP_140093959.1|698752_700582_-	replication endonuclease	NA	A0A2P1CKY6	Pseudoalteromonas_phage	37.5	5.3e-66
WP_025558395.1|700583_700850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053048196.1|700924_701413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025558397.1|701420_701651_-	hypothetical protein	NA	A0A2I7RNG5	Vibrio_phage	59.2	2.3e-19
WP_140093957.1|701755_702037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069484942.1|702047_702587_-	transcriptional regulator	NA	A0A2I7RNI1	Vibrio_phage	58.1	2.9e-52
WP_045607456.1|702701_702914_-	hypothetical protein	NA	U3PFJ1	Vibrio_phage	52.9	3.0e-13
WP_069484941.1|703004_703613_+	phage repressor protein CI	NA	A0A1D9C9M6	Salinivibrio_phage	39.4	4.2e-36
WP_140093955.1|703640_703940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069485024.1|704014_704224_+	hypothetical protein	NA	A0A0H5AWA7	Pseudomonas_phage	84.6	3.8e-05
