The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046776	Vibrio parahaemolyticus strain AM43962 chromosome 1, complete sequence	3297364	751893	758595	3297364		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|751893_753033_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_029846544.1|753050_754301_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	4.7e-98
WP_005482986.1|754428_754878_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_025637488.1|754885_756010_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.6	1.2e-47
WP_005483039.1|756022_756676_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_025521214.1|756845_757955_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005440184.1|758124_758595_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NZ_CP046776	Vibrio parahaemolyticus strain AM43962 chromosome 1, complete sequence	3297364	1633590	1642710	3297364		Vibrio_phage(100.0%)	15	NA	NA
WP_158127827.1|1633590_1633959_-	hypothetical protein	NA	Q9MCC3	Vibrio_phage	95.9	3.1e-58
WP_029851179.1|1634115_1634331_+	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	97.2	7.7e-33
WP_158127830.1|1634254_1635463_+	phage replication protein	NA	Q7DKP2	Vibrio_phage	98.3	4.8e-241
WP_005477647.1|1635466_1635826_+	DUF1293 domain-containing protein	NA	Q783U4	Vibrio_phage	100.0	9.1e-63
WP_005477619.1|1635829_1636060_+	hypothetical protein	NA	Q783U3	Vibrio_phage	100.0	1.6e-36
WP_005495000.1|1636065_1636311_+	hypothetical protein	NA	Q783U2	Vibrio_phage	97.5	3.7e-31
WP_011105866.1|1636323_1636434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063491056.1|1636836_1637943_+	hypothetical protein	NA	Q783U1	Vibrio_phage	93.8	2.6e-156
WP_005477634.1|1637944_1638289_+	DUF2523 domain-containing protein	NA	Q783U0	Vibrio_phage	100.0	5.0e-58
WP_158127832.1|1638293_1639679_+	toxin	NA	Q783T9	Vibrio_phage	99.6	8.8e-263
WP_158127834.1|1639678_1639822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101910936.1|1639792_1639909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158127836.1|1640319_1641678_+	AAA family ATPase	NA	A0A2I7RNF1	Vibrio_phage	28.5	1.7e-32
WP_025506512.1|1641670_1642318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029854592.1|1642344_1642710_-	phage protein	NA	Q9MCC4	Vibrio_phage	95.0	3.9e-61
>prophage 3
NZ_CP046776	Vibrio parahaemolyticus strain AM43962 chromosome 1, complete sequence	3297364	1902161	1916078	3297364		Vibrio_phage(40.0%)	16	NA	NA
WP_005495398.1|1902161_1904387_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.7	8.2e-61
WP_005483265.1|1904681_1904894_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	2.9e-16
WP_005483162.1|1905800_1906004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495402.1|1906226_1906634_-	APSE-2 prophage; Q protein	NA	NA	NA	NA	NA
WP_005495404.1|1906670_1907072_-	NinG recombination protein/bacteriophage lambda NinG family protein	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_005495408.1|1907240_1907891_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	36.5	7.0e-21
WP_005495410.1|1907883_1908264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021486513.1|1908260_1909214_-	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.3	3.8e-39
WP_005495414.1|1909279_1909498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495415.1|1909494_1909959_-	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.0	3.0e-18
WP_021486590.1|1909978_1910200_-	helix-turn-helix transcriptional regulator	NA	A0A1P8DTF8	Proteus_phage	40.6	2.8e-06
WP_024702645.1|1910308_1910977_+	helix-turn-helix domain-containing protein	NA	A0A1V0E8B5	Vibrio_phage	57.1	1.1e-66
WP_127463331.1|1911688_1911868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089183536.1|1911880_1915045_+	hypothetical protein	NA	I3PUZ3	Vibrio_phage	33.6	1.1e-23
WP_021453095.1|1915037_1915565_+	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_021453797.1|1915889_1916078_+	hypothetical protein	NA	F6LQB8	Bdellovibrio_phage	52.8	8.8e-09
>prophage 4
NZ_CP046776	Vibrio parahaemolyticus strain AM43962 chromosome 1, complete sequence	3297364	2746985	2764168	3297364	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_005455546.1|2746985_2749568_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
WP_140112252.1|2749710_2750178_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_025606301.1|2750301_2751345_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	1.1e-111
WP_029826209.1|2751545_2752028_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	2.2e-27
WP_025535213.1|2752112_2754674_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.7	1.3e-33
WP_005455560.1|2755822_2756746_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|2756760_2757387_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_025554253.1|2757386_2758163_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.0	1.1e-65
WP_158128015.1|2758162_2759206_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005380896.1|2759252_2759729_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_005478544.1|2759746_2760451_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	23.6	5.9e-05
WP_005455577.1|2760452_2760734_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|2761147_2762449_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455581.1|2762527_2764168_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
>prophage 1
NZ_CP046775	Vibrio parahaemolyticus strain AM43962 chromosome 2, complete sequence	1830723	135132	147634	1830723	coat	Vibrio_phage(77.78%)	14	NA	NA
WP_140309975.1|135132_136989_-	hypothetical protein	NA	A0A2I7RNF8	Vibrio_phage	43.0	1.3e-112
WP_025543256.1|136985_137174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025543257.1|137176_137554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021450890.1|137550_137742_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021450889.1|137886_138150_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_158127010.1|138168_138537_-	hypothetical protein	NA	R9TE55	Vibrio_phage	72.0	1.4e-42
WP_025505236.1|138736_139009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158127011.1|139008_141039_+	replication endonuclease	NA	A0A0F6YPA7	Vibrio_phage	53.4	1.4e-197
WP_012841822.1|141122_141428_+	hypothetical protein	NA	Q2PZB5	Vibrio_virus	51.0	8.1e-20
WP_025506202.1|141698_141962_+	hypothetical protein	NA	R9TI50	Vibrio_phage	41.7	1.5e-06
WP_025501660.1|143664_144024_+|coat	minor coat protein	coat	R9TIT8	Vibrio_phage	42.1	1.6e-19
WP_158127448.1|144023_145097_+	hypothetical protein	NA	O80263	Vibrio_phage	62.8	2.3e-125
WP_029803822.1|145114_146467_+	type II secretory pathway protein	NA	R9TEZ5	Vibrio_phage	59.5	2.3e-122
WP_158127012.1|147049_147634_+	toxin-antitoxin system HicB family antitoxin	NA	A0A0K2CZV4	Paenibacillus_phage	33.3	2.3e-07
