assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	1	364874-365572	1	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	365162-365203|365237-365269	NZ_CP046728.2_373178-373219|NZ_CP046728.2_371993-372025	NA	10	10	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP046728.2_361886_362189_+,NA|161aa|down_1|NZ_CP046728.2_374967_375450_-,NA|410aa|down_5|NZ_CP046728.2_377566_378796_+	NA|262aa|up_9|NZ_CP046728.2_356581_357367_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP046728.2_357355_358159_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP046728.2_358168_359566_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP046728.2_359744_361520_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP046728.2_361662_361890_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP046728.2_361886_362189_+	NA	NA|74aa|up_3|NZ_CP046728.2_362236_362458_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP046728.2_362454_362880_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP046728.2_363015_363648_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP046728.2_363644_364553_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP046728.2_374308_374980_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP046728.2_374967_375450_-	NA	NA|239aa|down_2|NZ_CP046728.2_375507_376224_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP046728.2_376325_376982_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP046728.2_377051_377543_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP046728.2_377566_378796_+	NA	NA|621aa|down_6|NZ_CP046728.2_378950_380813_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP046728.2_380884_381271_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP046728.2_381273_381909_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP046728.2_381996_382881_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	2	690408-690484	2	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP046728.2_676090_676306_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP046728.2_676302_676710_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP046728.2_676769_677456_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP046728.2_677609_680243_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP046728.2_680265_682653_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP046728.2_682790_683513_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP046728.2_683509_684307_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP046728.2_684308_685196_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP046728.2_685201_686416_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP046728.2_687441_688887_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP046728.2_691619_693170_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP046728.2_693221_693614_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP046728.2_693610_693868_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP046728.2_694050_695286_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP046728.2_695536_695950_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP046728.2_695946_696183_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP046728.2_696286_696793_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP046728.2_696906_697377_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP046728.2_697420_698182_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP046728.2_698238_698550_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	3	1573840-1574912	3	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1574040-1574061	NZ_CP046728.2_1210876-1210855	NA	15	15	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP046728.2_1565603_1565921_+,NA	NA|103aa|up_9|NZ_CP046728.2_1563118_1563427_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP046728.2_1563423_1565043_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP046728.2_1565603_1565921_+	NA	NA|209aa|up_6|NZ_CP046728.2_1566055_1566682_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP046728.2_1566747_1567080_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP046728.2_1567095_1568352_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP046728.2_1568479_1569691_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP046728.2_1569763_1571242_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP046728.2_1571238_1572624_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP046728.2_1572701_1573736_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP046728.2_1575766_1576168_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP046728.2_1576164_1576422_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP046728.2_1576504_1577464_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP046728.2_1577488_1578451_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NZ_CP046728.2_1578449_1579187_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP046728.2_1579267_1581235_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP046728.2_1581252_1582077_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP046728.2_1582245_1582728_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP046728.2_1582799_1583624_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP046728.2_1583820_1584759_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	4	1858839-1859014	1	PILER-CR	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCGTACAA	18	0	0	NA	NA	NA	2	2	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|269aa|up_2|NZ_CP046728.2_1851764_1852571_+,NA	NA|202aa|up_9|NZ_CP046728.2_1846306_1846912_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|65aa|up_8|NZ_CP046728.2_1846961_1847156_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|130aa|up_7|NZ_CP046728.2_1847217_1847607_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|261aa|up_6|NZ_CP046728.2_1847639_1848422_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|352aa|up_5|NZ_CP046728.2_1848432_1849488_-	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|311aa|up_4|NZ_CP046728.2_1849797_1850730_+	pfam00934, PE, PE family	NA|317aa|up_3|NZ_CP046728.2_1850807_1851758_+	cd07302, CHD, cyclase homology domain	NA|269aa|up_2|NZ_CP046728.2_1851764_1852571_+	NA	NA|342aa|up_1|NZ_CP046728.2_1852766_1853792_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|832aa|up_0|NZ_CP046728.2_1853791_1856287_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|353aa|down_0|NZ_CP046728.2_1859630_1860689_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|405aa|down_1|NZ_CP046728.2_1860685_1861900_+	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|295aa|down_2|NZ_CP046728.2_1861896_1862781_+	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|401aa|down_3|NZ_CP046728.2_1862777_1863980_+	PRK03244, argD, acetylornithine transaminase	NA|308aa|down_4|NZ_CP046728.2_1863976_1864900_+	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|171aa|down_5|NZ_CP046728.2_1864896_1865409_+	PRK03341, PRK03341, arginine repressor; Provisional	NA|399aa|down_6|NZ_CP046728.2_1865417_1866614_+	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|471aa|down_7|NZ_CP046728.2_1866693_1868106_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|354aa|down_8|NZ_CP046728.2_1868214_1869276_+	COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|2127aa|down_9|NZ_CP046728.2_1869358_1875739_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	5	2073586-2073840	1	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2073667-2073684|2073667-2073684|2073757-2073774	NZ_CP046728.2_399474-399457|NZ_CP046728.2_605741-605724|NZ_CP046728.2_3440935-3440918	NA	5	5	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP046728.2_2072945_2073209_-,NA	NA|165aa|up_9|NZ_CP046728.2_2059295_2059790_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP046728.2_2060137_2060815_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP046728.2_2061173_2063999_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP046728.2_2064225_2065086_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP046728.2_2065126_2065993_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP046728.2_2065997_2067884_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP046728.2_2067899_2069933_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP046728.2_2070052_2072278_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP046728.2_2072553_2072949_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP046728.2_2072945_2073209_-	NA	NA|346aa|down_0|NZ_CP046728.2_2074977_2076015_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP046728.2_2076014_2077382_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP046728.2_2077555_2078995_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP046728.2_2079027_2080479_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP046728.2_2080508_2081459_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP046728.2_2081473_2081890_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP046728.2_2082167_2082590_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_7|NZ_CP046728.2_2082638_2082941_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP046728.2_2082937_2083252_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP046728.2_2083251_2084985_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	6	2156448-2156667	4	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP046728.2_2145268_2145676_-,NA|127aa|down_5|NZ_CP046728.2_2164183_2164564_-	NA|155aa|up_9|NZ_CP046728.2_2138596_2139061_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP046728.2_2139236_2141459_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP046728.2_2141496_2141940_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP046728.2_2142053_2142647_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP046728.2_2142729_2143335_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP046728.2_2143434_2144439_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP046728.2_2144538_2145291_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP046728.2_2145268_2145676_-	NA	NA|767aa|up_1|NZ_CP046728.2_2145810_2148111_+	PLN02892, PLN02892, isocitrate lyase	NA|421aa|up_0|NZ_CP046728.2_2152024_2153286_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|155aa|down_0|NZ_CP046728.2_2158694_2159159_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP046728.2_2159256_2160120_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP046728.2_2160157_2161429_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP046728.2_2161700_2162816_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP046728.2_2162806_2164147_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP046728.2_2164183_2164564_-	NA	NA|621aa|down_6|NZ_CP046728.2_2164720_2166583_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP046728.2_2166590_2167070_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP046728.2_2167306_2168080_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP046728.2_2168083_2168851_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	7	3114007-3115154	2,5,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	csm3gr7,csm2gr11,cas10,cas6	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-D,Type III-C,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,NNNNNNNNGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,44,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A:II-B,III-A	12,14,15,12	15	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP046728.2_3107286_3107541_-,NA|135aa|up_7|NZ_CP046728.2_3107688_3108093_+,NA|64aa|up_6|NZ_CP046728.2_3108089_3108281_+,NA|86aa|up_4|NZ_CP046728.2_3109867_3110125_+,NA|104aa|up_3|NZ_CP046728.2_3110229_3110541_+,NA|203aa|up_2|NZ_CP046728.2_3110960_3111569_+,NA	NA|92aa|up_9|NZ_CP046728.2_3106835_3107111_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP046728.2_3107286_3107541_-	NA	NA|135aa|up_7|NZ_CP046728.2_3107688_3108093_+	NA	NA|64aa|up_6|NZ_CP046728.2_3108089_3108281_+	NA	NA|385aa|up_5|NZ_CP046728.2_3108479_3109634_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP046728.2_3109867_3110125_+	NA	NA|104aa|up_3|NZ_CP046728.2_3110229_3110541_+	NA	NA|203aa|up_2|NZ_CP046728.2_3110960_3111569_+	NA	NA|470aa|up_1|NZ_CP046728.2_3111639_3113049_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP046728.2_3113045_3113858_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP046728.2_3115185_3116447_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NZ_CP046728.2_3116810_3117521_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NZ_CP046728.2_3117530_3117905_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NZ_CP046728.2_3117901_3120340_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_4|NZ_CP046728.2_3120336_3121059_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NZ_CP046728.2_3121458_3122004_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NZ_CP046728.2_3122275_3123160_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NZ_CP046728.2_3123162_3124050_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NZ_CP046728.2_3124354_3124900_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NZ_CP046728.2_3124896_3125166_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	8	3659602-3659720	6	CRISPRCasFinder	no	cas3	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Unclear	GCCCCTGTGAGTCGAGTGAGCGGAACGAAC	30	1	1	3659632-3659690	NZ_CP046728.2_3659695-3659753	NA	1	1	Unclear	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|138aa|down_6|NZ_CP046728.2_3665353_3665767_-,NA|126aa|down_7|NZ_CP046728.2_3665801_3666179_-	NA|719aa|up_9|NZ_CP046728.2_3646428_3648585_+	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|223aa|up_8|NZ_CP046728.2_3648581_3649250_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|395aa|up_7|NZ_CP046728.2_3649350_3650535_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|765aa|up_6|NZ_CP046728.2_3650539_3652834_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|390aa|up_5|NZ_CP046728.2_3652822_3653992_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|175aa|up_4|NZ_CP046728.2_3654016_3654541_-	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase	NA|430aa|up_3|NZ_CP046728.2_3654537_3655827_-	TIGR01161, N5-carboxyaminoimidazole_ribonucleotide_synthase, phosphoribosylaminoimidazole carboxylase, PurK protein	NA|273aa|up_2|NZ_CP046728.2_3655780_3656599_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|173aa|up_1|NZ_CP046728.2_3656553_3657072_-	pfam03703, bPH_2, Bacterial PH domain	NA|267aa|up_0|NZ_CP046728.2_3657114_3657915_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|223aa|down_0|NZ_CP046728.2_3659986_3660655_+	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|298aa|down_1|NZ_CP046728.2_3660695_3661589_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|144aa|down_2|NZ_CP046728.2_3661585_3662017_+	COG2166, sufE, Cysteine desulfurase SufE subunit [Posttranslational modification, protein turnover, chaperones]	NA|601aa|down_3|NZ_CP046728.2_3662124_3663927_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|262aa|down_4|NZ_CP046728.2_3663936_3664722_-	PRK07122, PRK07122, RNA polymerase sigma factor SigF; Reviewed	NA|146aa|down_5|NZ_CP046728.2_3664718_3665156_-	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]	NA|138aa|down_6|NZ_CP046728.2_3665353_3665767_-	NA	NA|126aa|down_7|NZ_CP046728.2_3665801_3666179_-	NA	NA|450aa|down_8|NZ_CP046728.2_3666212_3667562_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|151aa|down_9|NZ_CP046728.2_3667612_3668065_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	9	3743698-3744274	3	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGTTGCCNCCGNNGCCGCCG	25	0	0	NA	NA	NA	7	7	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP046728.2_3758506_3758794_-,NA|87aa|down_8|NZ_CP046728.2_3771913_3772174_-	NA|282aa|up_9|NZ_CP046728.2_3719564_3720410_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP046728.2_3720884_3721325_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP046728.2_3721358_3722228_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP046728.2_3722248_3723259_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_5|NZ_CP046728.2_3723531_3724176_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP046728.2_3724242_3725472_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP046728.2_3725754_3727104_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP046728.2_3727115_3728255_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP046728.2_3728251_3728983_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3690aa|up_0|NZ_CP046728.2_3728991_3740061_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP046728.2_3746376_3746634_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP046728.2_3746889_3756363_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP046728.2_3756988_3757435_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP046728.2_3757471_3758212_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP046728.2_3758506_3758794_-	NA	NA|265aa|down_5|NZ_CP046728.2_3770523_3771318_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP046728.2_3771399_3771771_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_7|NZ_CP046728.2_3771668_3771887_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP046728.2_3771913_3772174_-	NA	NA|130aa|down_9|NZ_CP046728.2_3772288_3772678_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	10	3853267-3853356	7	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_7|NZ_CP046728.2_3845303_3845534_+,NA|121aa|up_6|NZ_CP046728.2_3845637_3846000_-,NA|73aa|up_2|NZ_CP046728.2_3851332_3851551_-,NA|121aa|down_0|NZ_CP046728.2_3854341_3854704_-,NA|52aa|down_2|NZ_CP046728.2_3856545_3856701_-,NA|52aa|down_3|NZ_CP046728.2_3856725_3856881_-,NA|238aa|down_6|NZ_CP046728.2_3860916_3861630_-	NA|169aa|up_9|NZ_CP046728.2_3843614_3844121_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|409aa|up_8|NZ_CP046728.2_3844117_3845344_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_7|NZ_CP046728.2_3845303_3845534_+	NA	NA|121aa|up_6|NZ_CP046728.2_3845637_3846000_-	NA	NA|177aa|up_5|NZ_CP046728.2_3846958_3847489_+	pfam00823, PPE, PPE family	NA|252aa|up_4|NZ_CP046728.2_3847806_3848562_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|421aa|up_3|NZ_CP046728.2_3848645_3849907_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|73aa|up_2|NZ_CP046728.2_3851332_3851551_-	NA	NA|100aa|up_1|NZ_CP046728.2_3852045_3852345_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP046728.2_3852430_3852973_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP046728.2_3854341_3854704_-	NA	NA|179aa|down_1|NZ_CP046728.2_3854866_3855403_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP046728.2_3856545_3856701_-	NA	NA|52aa|down_3|NZ_CP046728.2_3856725_3856881_-	NA	NA|461aa|down_4|NZ_CP046728.2_3858073_3859456_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP046728.2_3859493_3860915_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP046728.2_3860916_3861630_-	NA	NA|285aa|down_7|NZ_CP046728.2_3861640_3862495_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP046728.2_3862716_3864591_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP046728.2_3864612_3865089_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	11	3938599-3939543	4	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGNNNCGGCGGCNCCGGCGGC	24	0	0	NA	NA	NA	12	12	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_5|NZ_CP046728.2_3959677_3960517_+	NA|351aa|up_9|NZ_CP046728.2_3923345_3924398_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|401aa|up_8|NZ_CP046728.2_3924397_3925600_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|281aa|up_7|NZ_CP046728.2_3925619_3926462_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|255aa|up_6|NZ_CP046728.2_3926496_3927261_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_5|NZ_CP046728.2_3927486_3928440_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_4|NZ_CP046728.2_3928464_3928656_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_3|NZ_CP046728.2_3928870_3930073_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_2|NZ_CP046728.2_3930097_3931219_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_1|NZ_CP046728.2_3931289_3932798_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1384aa|up_0|NZ_CP046728.2_3932968_3937120_+	pfam00934, PE, PE family	NA|516aa|down_0|NZ_CP046728.2_3942439_3943987_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|down_1|NZ_CP046728.2_3943983_3944820_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|down_2|NZ_CP046728.2_3951132_3951789_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_3|NZ_CP046728.2_3957070_3958717_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_4|NZ_CP046728.2_3958790_3959582_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_5|NZ_CP046728.2_3959677_3960517_+	NA	NA|399aa|down_6|NZ_CP046728.2_3960571_3961768_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_7|NZ_CP046728.2_3961796_3962507_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_8|NZ_CP046728.2_3962571_3963615_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_9|NZ_CP046728.2_3963767_3964679_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	12	3954596-3956209	5	CRT	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNCCGGCGGNACCGGCGGCNNNGGCGGCNCCGGCGG	36	1	6	3955196-3955231|3955196-3955231|3955196-3955231|3955196-3955231|3955196-3955231|3955196-3955231	NZ_CP046728.2_3953063-3953098|NZ_CP046728.2_3953375-3953410|NZ_CP046728.2_3953726-3953761|NZ_CP046728.2_3954077-3954112|NZ_CP046728.2_3954236-3954271|NZ_CP046728.2_3954587-3954622	NA	20	20	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP046728.2_3959677_3960517_+	NA|318aa|up_9|NZ_CP046728.2_3927486_3928440_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP046728.2_3928464_3928656_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP046728.2_3928870_3930073_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP046728.2_3930097_3931219_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP046728.2_3931289_3932798_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1384aa|up_4|NZ_CP046728.2_3932968_3937120_+	pfam00934, PE, PE family	NA|1621aa|up_3|NZ_CP046728.2_3937410_3942273_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP046728.2_3942439_3943987_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP046728.2_3943983_3944820_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP046728.2_3951132_3951789_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP046728.2_3957070_3958717_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP046728.2_3958790_3959582_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP046728.2_3959677_3960517_+	NA	NA|399aa|down_3|NZ_CP046728.2_3960571_3961768_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP046728.2_3961796_3962507_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP046728.2_3962571_3963615_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP046728.2_3963767_3964679_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP046728.2_3964694_3965759_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP046728.2_3965775_3966960_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP046728.2_3967001_3968033_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_009762675.2_ASM976267v2	NZ_CP046728	Mycobacterium tuberculosis strain TCDC11 chromosome, complete genome	13	4117163-4117251	8	CRISPRCasFinder	no		csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP046728.2_4107749_4108520_-,NA|233aa|up_0|NZ_CP046728.2_4116267_4116966_-,NA|126aa|down_6|NZ_CP046728.2_4122486_4122864_+	NA|388aa|up_9|NZ_CP046728.2_4103420_4104584_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP046728.2_4104580_4105633_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP046728.2_4106131_4106995_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP046728.2_4107749_4108520_-	NA	NA|549aa|up_5|NZ_CP046728.2_4108516_4110163_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP046728.2_4110159_4111023_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP046728.2_4111015_4111942_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP046728.2_4111943_4113569_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP046728.2_4114276_4116232_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP046728.2_4116267_4116966_-	NA	NA|173aa|down_0|NZ_CP046728.2_4117311_4117830_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP046728.2_4117830_4118814_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP046728.2_4118806_4120000_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP046728.2_4120005_4120827_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP046728.2_4120958_4121642_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP046728.2_4121641_4122379_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP046728.2_4122486_4122864_+	NA	NA|225aa|down_7|NZ_CP046728.2_4122962_4123637_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP046728.2_4123742_4124537_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP046728.2_4124543_4124999_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
