assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009758095.1_ASM975809v1	NZ_CP046630	Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence	1	55880-55956	1	CRISPRCasFinder	no	c2c4_V-U1	c2c4_V-U1	Type V-U1	TGCTAGTTCTTCTGGGGTTTCCAAAT	26	0	0	NA	NA	NA	1	1	TypeV-U1	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA|61aa|up_9|NZ_CP046630.1_45943_46126_-,NA|186aa|up_8|NZ_CP046630.1_46333_46891_-,NA|212aa|up_7|NZ_CP046630.1_47086_47722_-,c2c4_V-U1|427aa|up_6|NZ_CP046630.1_47839_49120_-,NA|120aa|up_4|NZ_CP046630.1_50739_51099_-,NA|226aa|up_3|NZ_CP046630.1_51101_51779_-,NA|658aa|up_2|NZ_CP046630.1_51801_53775_-,NA|245aa|up_1|NZ_CP046630.1_53789_54524_-,NA|178aa|up_0|NZ_CP046630.1_54700_55234_+,NA|120aa|down_3|NZ_CP046630.1_61331_61691_-,NA|74aa|down_7|NZ_CP046630.1_64306_64528_-,NA|182aa|down_8|NZ_CP046630.1_64604_65150_-,NA|161aa|down_9|NZ_CP046630.1_65352_65835_-	NA|61aa|up_9|NZ_CP046630.1_45943_46126_-	NA	NA|186aa|up_8|NZ_CP046630.1_46333_46891_-	NA	NA|212aa|up_7|NZ_CP046630.1_47086_47722_-	NA	c2c4_V-U1|427aa|up_6|NZ_CP046630.1_47839_49120_-	NA	NA|411aa|up_5|NZ_CP046630.1_49364_50597_-	pfam05257, CHAP, CHAP domain	NA|120aa|up_4|NZ_CP046630.1_50739_51099_-	NA	NA|226aa|up_3|NZ_CP046630.1_51101_51779_-	NA	NA|658aa|up_2|NZ_CP046630.1_51801_53775_-	NA	NA|245aa|up_1|NZ_CP046630.1_53789_54524_-	NA	NA|178aa|up_0|NZ_CP046630.1_54700_55234_+	NA	NA|384aa|down_0|NZ_CP046630.1_57886_59038_-	cd16427, TraM-like, C-terminal domain of transfer protein TraM	NA|109aa|down_1|NZ_CP046630.1_59058_59385_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|626aa|down_2|NZ_CP046630.1_59454_61332_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|120aa|down_3|NZ_CP046630.1_61331_61691_-	NA	NA|193aa|down_4|NZ_CP046630.1_62958_63537_-	cd05399, NT_Rel-Spo_like, Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases	NA|88aa|down_5|NZ_CP046630.1_63602_63866_-	pfam18824, LPD11, Large polyvalent protein-associated domain 11	NA|91aa|down_6|NZ_CP046630.1_64033_64306_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|74aa|down_7|NZ_CP046630.1_64306_64528_-	NA	NA|182aa|down_8|NZ_CP046630.1_64604_65150_-	NA	NA|161aa|down_9|NZ_CP046630.1_65352_65835_-	NA
GCF_009758095.1_ASM975809v1	NZ_CP046630	Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence	2	61804-62039	1,1,2	CRT,PILER-CR,CRISPRCasFinder	no	c2c4_V-U1	c2c4_V-U1	Type V-U1	CTTTTGGAACCATGTCAAATAGACTAGTGCCAAAAC,AGTGAACTTTTGGAACCATGTCAAATAGACTAGTGCCAAAACCT,CTTTTGGAACCATGTCAAATAGACTAGTGCCAAAAC	36,44,36	0	0	NA	NA	NA:NA:NA	3,2,2	3	TypeV-U1	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA|120aa|up_9|NZ_CP046630.1_50739_51099_-,NA|226aa|up_8|NZ_CP046630.1_51101_51779_-,NA|658aa|up_7|NZ_CP046630.1_51801_53775_-,NA|245aa|up_6|NZ_CP046630.1_53789_54524_-,NA|178aa|up_5|NZ_CP046630.1_54700_55234_+,NA|120aa|up_0|NZ_CP046630.1_61331_61691_-,NA|74aa|down_3|NZ_CP046630.1_64306_64528_-,NA|182aa|down_4|NZ_CP046630.1_64604_65150_-,NA|161aa|down_5|NZ_CP046630.1_65352_65835_-,NA|48aa|down_6|NZ_CP046630.1_65901_66045_-,NA|124aa|down_7|NZ_CP046630.1_66079_66451_-,NA|75aa|down_8|NZ_CP046630.1_66481_66706_-,NA|80aa|down_9|NZ_CP046630.1_66702_66942_-	NA|120aa|up_9|NZ_CP046630.1_50739_51099_-	NA	NA|226aa|up_8|NZ_CP046630.1_51101_51779_-	NA	NA|658aa|up_7|NZ_CP046630.1_51801_53775_-	NA	NA|245aa|up_6|NZ_CP046630.1_53789_54524_-	NA	NA|178aa|up_5|NZ_CP046630.1_54700_55234_+	NA	NA|864aa|up_4|NZ_CP046630.1_55279_57871_-	pfam17823, DUF5585, Family of unknown function (DUF5585)	NA|384aa|up_3|NZ_CP046630.1_57886_59038_-	cd16427, TraM-like, C-terminal domain of transfer protein TraM	NA|109aa|up_2|NZ_CP046630.1_59058_59385_-	pfam04956, TrbC, TrbC/VIRB2 family	NA|626aa|up_1|NZ_CP046630.1_59454_61332_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|120aa|up_0|NZ_CP046630.1_61331_61691_-	NA	NA|193aa|down_0|NZ_CP046630.1_62958_63537_-	cd05399, NT_Rel-Spo_like, Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases	NA|88aa|down_1|NZ_CP046630.1_63602_63866_-	pfam18824, LPD11, Large polyvalent protein-associated domain 11	NA|91aa|down_2|NZ_CP046630.1_64033_64306_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|74aa|down_3|NZ_CP046630.1_64306_64528_-	NA	NA|182aa|down_4|NZ_CP046630.1_64604_65150_-	NA	NA|161aa|down_5|NZ_CP046630.1_65352_65835_-	NA	NA|48aa|down_6|NZ_CP046630.1_65901_66045_-	NA	NA|124aa|down_7|NZ_CP046630.1_66079_66451_-	NA	NA|75aa|down_8|NZ_CP046630.1_66481_66706_-	NA	NA|80aa|down_9|NZ_CP046630.1_66702_66942_-	NA
GCF_009758095.1_ASM975809v1	NZ_CP046630	Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence	3	75872-75974	3	CRISPRCasFinder	no		c2c4_V-U1	Orphan	GTTTTGGCACTAGTCTGTTTGACATGGTTCCAAAAGT	37	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA|66aa|up_9|NZ_CP046630.1_67633_67831_-,NA|112aa|up_7|NZ_CP046630.1_68611_68947_-,NA|172aa|up_2|NZ_CP046630.1_74375_74891_-,NA|90aa|up_1|NZ_CP046630.1_74962_75232_-,NA|47aa|up_0|NZ_CP046630.1_75474_75615_-,NA|357aa|down_0|NZ_CP046630.1_76151_77222_+,NA|112aa|down_1|NZ_CP046630.1_77465_77801_-,NA|251aa|down_2|NZ_CP046630.1_77894_78647_-,NA|351aa|down_3|NZ_CP046630.1_78841_79894_-,NA|266aa|down_4|NZ_CP046630.1_80259_81057_-,NA|82aa|down_6|NZ_CP046630.1_82451_82697_-,NA|231aa|down_7|NZ_CP046630.1_83583_84276_-	NA|66aa|up_9|NZ_CP046630.1_67633_67831_-	NA	NA|230aa|up_8|NZ_CP046630.1_67867_68557_-	PRK00024, PRK00024, DNA repair protein RadC	NA|112aa|up_7|NZ_CP046630.1_68611_68947_-	NA	NA|320aa|up_6|NZ_CP046630.1_69018_69978_-	pfam04404, ERF, ERF superfamily	NA|148aa|up_5|NZ_CP046630.1_70256_70700_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|520aa|up_4|NZ_CP046630.1_71353_72913_-	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair]	NA|247aa|up_3|NZ_CP046630.1_73623_74364_-	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|172aa|up_2|NZ_CP046630.1_74375_74891_-	NA	NA|90aa|up_1|NZ_CP046630.1_74962_75232_-	NA	NA|47aa|up_0|NZ_CP046630.1_75474_75615_-	NA	NA|357aa|down_0|NZ_CP046630.1_76151_77222_+	NA	NA|112aa|down_1|NZ_CP046630.1_77465_77801_-	NA	NA|251aa|down_2|NZ_CP046630.1_77894_78647_-	NA	NA|351aa|down_3|NZ_CP046630.1_78841_79894_-	NA	NA|266aa|down_4|NZ_CP046630.1_80259_81057_-	NA	NA|213aa|down_5|NZ_CP046630.1_81151_81790_-	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus	NA|82aa|down_6|NZ_CP046630.1_82451_82697_-	NA	NA|231aa|down_7|NZ_CP046630.1_83583_84276_-	NA	NA|192aa|down_8|NZ_CP046630.1_84283_84859_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|166aa|down_9|NZ_CP046630.1_85417_85915_-	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins
GCF_009758095.1_ASM975809v1	NZ_CP046630	Streptococcus equinus strain CNU G6 plasmid p1_CNU_G6, complete sequence	4	83082-83381	2,2,4	CRT,PILER-CR,CRISPRCasFinder	no		c2c4_V-U1	Orphan	CTTTTGGAACCATGTCAAATAGACTAGTGCCAAAAC,TCTTTTGGAACCATGTCAAATAGACTAGTGCCAAAAC,CTTTTGGAACCATGTCAAATAGACTAGTGCCAAAAC	36,37,36	1	1	83118-83147	NZ_CP046630.1_76003-75974	NA:NA:NA	4,3,3	4	Orphan	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA|172aa|up_9|NZ_CP046630.1_74375_74891_-,NA|90aa|up_8|NZ_CP046630.1_74962_75232_-,NA|47aa|up_7|NZ_CP046630.1_75474_75615_-,NA|357aa|up_6|NZ_CP046630.1_76151_77222_+,NA|112aa|up_5|NZ_CP046630.1_77465_77801_-,NA|251aa|up_4|NZ_CP046630.1_77894_78647_-,NA|351aa|up_3|NZ_CP046630.1_78841_79894_-,NA|266aa|up_2|NZ_CP046630.1_80259_81057_-,NA|82aa|up_0|NZ_CP046630.1_82451_82697_-,NA|231aa|down_0|NZ_CP046630.1_83583_84276_-	NA|172aa|up_9|NZ_CP046630.1_74375_74891_-	NA	NA|90aa|up_8|NZ_CP046630.1_74962_75232_-	NA	NA|47aa|up_7|NZ_CP046630.1_75474_75615_-	NA	NA|357aa|up_6|NZ_CP046630.1_76151_77222_+	NA	NA|112aa|up_5|NZ_CP046630.1_77465_77801_-	NA	NA|251aa|up_4|NZ_CP046630.1_77894_78647_-	NA	NA|351aa|up_3|NZ_CP046630.1_78841_79894_-	NA	NA|266aa|up_2|NZ_CP046630.1_80259_81057_-	NA	NA|213aa|up_1|NZ_CP046630.1_81151_81790_-	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus	NA|82aa|up_0|NZ_CP046630.1_82451_82697_-	NA	NA|231aa|down_0|NZ_CP046630.1_83583_84276_-	NA	NA|192aa|down_1|NZ_CP046630.1_84283_84859_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|166aa|down_2|NZ_CP046630.1_85417_85915_-	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
GCF_009758095.1_ASM975809v1	NZ_CP046629	Streptococcus equinus strain CNU G6 chromosome, complete genome	1	1678926-1678997	1	CRISPRCasFinder	no		DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9	Orphan	TGAAAAAACTGTCCACTGGACGT	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA|57aa|up_4|NZ_CP046629.1_1674471_1674642_-,NA	NA|223aa|up_9|NZ_CP046629.1_1669429_1670098_+	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|315aa|up_8|NZ_CP046629.1_1670132_1671077_-	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|459aa|up_7|NZ_CP046629.1_1671089_1672466_-	PRK11387, PRK11387, S-methylmethionine permease	NA|198aa|up_6|NZ_CP046629.1_1672602_1673196_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|410aa|up_5|NZ_CP046629.1_1673205_1674435_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|57aa|up_4|NZ_CP046629.1_1674471_1674642_-	NA	NA|165aa|up_3|NZ_CP046629.1_1674657_1675152_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|280aa|up_2|NZ_CP046629.1_1675235_1676075_-	PRK01827, thyA, thymidylate synthase; Reviewed	NA|393aa|up_1|NZ_CP046629.1_1676404_1677583_+	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|425aa|up_0|NZ_CP046629.1_1677569_1678844_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|148aa|down_0|NZ_CP046629.1_1679073_1679517_+	pfam08876, DUF1836, Domain of unknown function (DUF1836)	NA|219aa|down_1|NZ_CP046629.1_1679506_1680163_+	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|333aa|down_2|NZ_CP046629.1_1680186_1681185_-	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional	NA|318aa|down_3|NZ_CP046629.1_1681200_1682154_-	pfam13248, zf-ribbon_3, zinc-ribbon domain	NA|333aa|down_4|NZ_CP046629.1_1682175_1683174_-	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|317aa|down_5|NZ_CP046629.1_1683160_1684111_-	TIGR01240, Diphosphomevalonate_decarboxylase, diphosphomevalonate decarboxylase	NA|293aa|down_6|NZ_CP046629.1_1684092_1684971_-	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|291aa|down_7|NZ_CP046629.1_1685126_1685999_-	cd13694, PBP2_Cysteine, Substrate binding domain of ABC cysteine transporter; the type 2 periplasmic binding protein fold	NA|252aa|down_8|NZ_CP046629.1_1686028_1686784_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|226aa|down_9|NZ_CP046629.1_1686780_1687458_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_009758095.1_ASM975809v1	NZ_CP046629	Streptococcus equinus strain CNU G6 chromosome, complete genome	2	1863939-1866348	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9	Type II-C,Type II-B,Type II-A	GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC,GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	1	1	1863975-1864005	NZ_CP046629.1_1114756-1114726	NA:NA:NA	36,36,25	36	TypeII-C,TypeII-B,TypeII-A	DinG,csa3,DEDDh,WYL,cas3,csn2,cas2,cas1,cas9,c2c4_V-U1	NA,NA|57aa|down_6|NZ_CP046629.1_1873154_1873325_-	NA|255aa|up_9|NZ_CP046629.1_1851689_1852454_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|394aa|up_8|NZ_CP046629.1_1852714_1853896_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|39aa|up_7|NZ_CP046629.1_1854258_1854375_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|368aa|up_6|NZ_CP046629.1_1854385_1855489_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|454aa|up_5|NZ_CP046629.1_1856072_1857434_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|490aa|up_4|NZ_CP046629.1_1857546_1859016_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|275aa|up_3|NZ_CP046629.1_1859167_1859992_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|159aa|up_2|NZ_CP046629.1_1859988_1860465_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_1|NZ_CP046629.1_1860457_1861741_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|612aa|up_0|NZ_CP046629.1_1861874_1863710_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	csn2|350aa|down_0|NZ_CP046629.1_1866410_1867460_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NZ_CP046629.1_1867456_1867780_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|304aa|down_2|NZ_CP046629.1_1867781_1868693_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1130aa|down_3|NZ_CP046629.1_1868864_1872254_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|139aa|down_4|NZ_CP046629.1_1872359_1872776_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|80aa|down_5|NZ_CP046629.1_1872893_1873133_-	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|57aa|down_6|NZ_CP046629.1_1873154_1873325_-	NA	NA|220aa|down_7|NZ_CP046629.1_1873321_1873981_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|258aa|down_8|NZ_CP046629.1_1873970_1874744_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|243aa|down_9|NZ_CP046629.1_1874817_1875546_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase
