The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046622	Variovorax paradoxus strain CSUSB chromosome, complete genome	5574400	644892	653399	5574400		Acinetobacter_phage(42.86%)	9	NA	NA
WP_157611818.1|644892_646395_+	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	28.7	4.3e-37
WP_157611819.1|646391_646784_+	GxxExxY protein	NA	A9YW17	Ostreococcus_tauri_virus	31.0	1.1e-05
WP_157611820.1|646780_647365_+	C26 family cysteine hydrolase domain-containing family	NA	A0A0P0IKJ1	Acinetobacter_phage	56.3	1.1e-57
WP_157611821.1|647370_648429_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_157611822.1|648454_649114_+	LysE family transporter	NA	NA	NA	NA	NA
WP_157611823.1|649134_650157_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	45.3	4.6e-75
WP_157611824.1|650183_650984_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	51.0	1.0e-58
WP_157611825.1|650980_651688_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	46.6	4.3e-48
WP_124962315.1|652205_653399_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	2.0e-13
>prophage 2
NZ_CP046622	Variovorax paradoxus strain CSUSB chromosome, complete genome	5574400	3380366	3395582	5574400	portal,tail,terminase,protease	Pseudomonas_phage(30.0%)	13	NA	NA
WP_157614359.1|3380366_3381995_-	hypothetical protein	NA	B7SYE9	Stenotrophomonas_phage	35.4	1.7e-71
WP_157614360.1|3382007_3384050_-	hypothetical protein	NA	A0A0M4U447	Ralstonia_phage	34.1	2.7e-87
WP_157616729.1|3384053_3384398_-	hypothetical protein	NA	A0A0M4UTA7	Ralstonia_phage	41.5	6.3e-13
WP_157614361.1|3384450_3387168_-|tail	phage tail tape measure protein	tail	D9ZNE6	Clostridium_phage	31.6	8.0e-34
WP_157614362.1|3387282_3388071_-	hypothetical protein	NA	M4R169	Loktanella_phage	40.2	4.6e-43
WP_157614363.1|3388094_3388439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157614364.1|3388504_3388801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157614365.1|3388805_3389129_-	DUF2190 family protein	NA	Q9EYD5	Enterobacteria_phage	37.4	4.6e-05
WP_157614366.1|3389193_3391287_-|protease	Clp protease ClpP	protease	A0A1W6JT88	Pseudomonas_phage	45.3	7.6e-125
WP_157614367.1|3391359_3392907_-|portal	phage portal protein	portal	A0A0A0YUB7	Pseudomonas_phage	43.1	1.8e-107
WP_157614368.1|3392909_3393140_-	hypothetical protein	NA	A0A1B0YZU1	Pseudomonas_phage	68.0	2.6e-10
WP_157616730.1|3393150_3393426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157614369.1|3393518_3395582_-|terminase	phage terminase large subunit family protein	terminase	K7PGW7	Enterobacteria_phage	37.4	1.0e-102
>prophage 3
NZ_CP046622	Variovorax paradoxus strain CSUSB chromosome, complete genome	5574400	3399405	3408445	5574400	integrase	Moraxella_phage(12.5%)	18	3400316:3400330	3410968:3410982
WP_157614376.1|3399405_3399624_-	hypothetical protein	NA	A0A0R6PHI7	Moraxella_phage	51.9	6.2e-06
WP_157614377.1|3399704_3400370_+	hypothetical protein	NA	A0A2H4J597	uncultured_Caudovirales_phage	30.9	4.8e-17
3400316:3400330	attL	GGCCGACGATTTCGA	NA	NA	NA	NA
WP_157614378.1|3400373_3400892_-	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
WP_157614379.1|3401013_3401217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614380.1|3401220_3401595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614381.1|3401591_3401933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614382.1|3401929_3402241_+	hypothetical protein	NA	G4W935	Tetrasphaera_phage	58.3	9.8e-21
WP_157614383.1|3402240_3402513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614384.1|3402681_3402849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614385.1|3402845_3403190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614386.1|3403209_3403905_+	hypothetical protein	NA	A0A0U3ECW8	Pseudomonas_phage	37.2	1.6e-15
WP_157614387.1|3403901_3404819_+	DNA (cytosine-5-)-methyltransferase	NA	H6WSH6	Mycobacterium_phage	44.0	2.4e-27
WP_157614388.1|3404815_3405571_+	hypothetical protein	NA	A0A0E3M3Z6	Verrucomicrobia_phage	45.3	5.1e-47
WP_157614389.1|3405567_3406023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614390.1|3406019_3406379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157614391.1|3406375_3407134_+	morphogenetic protein	NA	H2BDG4	Pseudomonas_virus	43.0	1.8e-39
WP_157614392.1|3407130_3407331_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_165442090.1|3407287_3408445_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	36.8	1.6e-55
3410968:3410982	attR	TCGAAATCGTCGGCC	NA	NA	NA	NA
>prophage 4
NZ_CP046622	Variovorax paradoxus strain CSUSB chromosome, complete genome	5574400	3778615	3786047	5574400		Erwinia_phage(16.67%)	9	NA	NA
WP_021008098.1|3778615_3779062_-	dUTP diphosphatase	NA	G0YQD9	Erwinia_phage	68.7	4.8e-45
WP_157614685.1|3779064_3779505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157614686.1|3779504_3780728_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.5	2.3e-33
WP_157614687.1|3780851_3782531_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.6	4.6e-149
WP_157614688.1|3782527_3783382_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	41.3	9.8e-47
WP_157614689.1|3783411_3783717_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_012748543.1|3783744_3785028_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	65.2	2.5e-155
WP_157614690.1|3785044_3785323_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_157614691.1|3785423_3786047_+	nicotinamide riboside transporter PnuC	NA	A0A0F6YPU8	Sinorhizobium_phage	25.1	4.5e-09
