assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009749345.1_ASM974934v1	NZ_CP046584	Burkholderia pseudomallei strain B03 chromosome 1, complete sequence	1	68096-68237	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,WYL	Orphan	CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGG	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|40aa|up_9|NZ_CP046584.1_50683_50803_+,NA|60aa|up_8|NZ_CP046584.1_50799_50979_+,NA|64aa|up_6|NZ_CP046584.1_52491_52683_-,NA|75aa|down_1|NZ_CP046584.1_69673_69898_-,NA|120aa|down_4|NZ_CP046584.1_72788_73148_-,NA|70aa|down_9|NZ_CP046584.1_76618_76828_-	NA|40aa|up_9|NZ_CP046584.1_50683_50803_+	NA	NA|60aa|up_8|NZ_CP046584.1_50799_50979_+	NA	NA|455aa|up_7|NZ_CP046584.1_51130_52495_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|64aa|up_6|NZ_CP046584.1_52491_52683_-	NA	NA|759aa|up_5|NZ_CP046584.1_52679_54956_-	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS	NA|168aa|up_4|NZ_CP046584.1_55012_55516_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|1115aa|up_3|NZ_CP046584.1_55524_58869_+	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|899aa|up_2|NZ_CP046584.1_62677_65374_+	PRK10875, recD, exodeoxyribonuclease V subunit alpha	NA|135aa|up_1|NZ_CP046584.1_65370_65775_+	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|404aa|up_0|NZ_CP046584.1_66212_67424_-	cd01948, EAL, EAL domain	NA|311aa|down_0|NZ_CP046584.1_68459_69392_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|75aa|down_1|NZ_CP046584.1_69673_69898_-	NA	NA|71aa|down_2|NZ_CP046584.1_70149_70362_-	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB	NA|644aa|down_3|NZ_CP046584.1_70585_72517_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|120aa|down_4|NZ_CP046584.1_72788_73148_-	NA	NA|102aa|down_5|NZ_CP046584.1_73166_73472_+	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein	NA|275aa|down_6|NZ_CP046584.1_73632_74457_+	pfam06764, DUF1223, Protein of unknown function (DUF1223)	NA|362aa|down_7|NZ_CP046584.1_74498_75584_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|264aa|down_8|NZ_CP046584.1_75599_76391_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|70aa|down_9|NZ_CP046584.1_76618_76828_-	NA
GCF_009749345.1_ASM974934v1	NZ_CP046584	Burkholderia pseudomallei strain B03 chromosome 1, complete sequence	2	2549544-2549647	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,WYL	Orphan	CGAGGTACCCGTACCCAGTTCGCGAGGT	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|60aa|up_6|NZ_CP046584.1_2540295_2540475_+,NA|226aa|up_2|NZ_CP046584.1_2544888_2545566_+,NA|362aa|up_1|NZ_CP046584.1_2545906_2546992_-,NA|478aa|up_0|NZ_CP046584.1_2547684_2549118_-,NA|154aa|down_0|NZ_CP046584.1_2550031_2550493_+,NA|281aa|down_4|NZ_CP046584.1_2555878_2556721_+,NA|96aa|down_6|NZ_CP046584.1_2557603_2557891_+,NA|118aa|down_7|NZ_CP046584.1_2559245_2559599_+,NA|113aa|down_8|NZ_CP046584.1_2559705_2560044_+	NA|306aa|up_9|NZ_CP046584.1_2537922_2538840_-	pfam16289, DUF4935, Domain of unknown function (DUF4935)	NA|106aa|up_8|NZ_CP046584.1_2538839_2539157_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|248aa|up_7|NZ_CP046584.1_2539536_2540280_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|60aa|up_6|NZ_CP046584.1_2540295_2540475_+	NA	NA|134aa|up_5|NZ_CP046584.1_2540599_2541001_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|169aa|up_4|NZ_CP046584.1_2541334_2541841_+	pfam13411, MerR_1, MerR HTH family regulatory protein	NA|1024aa|up_3|NZ_CP046584.1_2541833_2544905_+	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX	NA|226aa|up_2|NZ_CP046584.1_2544888_2545566_+	NA	NA|362aa|up_1|NZ_CP046584.1_2545906_2546992_-	NA	NA|478aa|up_0|NZ_CP046584.1_2547684_2549118_-	NA	NA|154aa|down_0|NZ_CP046584.1_2550031_2550493_+	NA	NA|429aa|down_1|NZ_CP046584.1_2550504_2551791_-	PRK09692, PRK09692, integrase; Provisional	NA|300aa|down_2|NZ_CP046584.1_2552319_2553219_+	COG3245, CycB, Cytochrome c5 [Energy production and conversion]	NA|696aa|down_3|NZ_CP046584.1_2553541_2555629_-	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|281aa|down_4|NZ_CP046584.1_2555878_2556721_+	NA	NA|268aa|down_5|NZ_CP046584.1_2556717_2557521_+	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|96aa|down_6|NZ_CP046584.1_2557603_2557891_+	NA	NA|118aa|down_7|NZ_CP046584.1_2559245_2559599_+	NA	NA|113aa|down_8|NZ_CP046584.1_2559705_2560044_+	NA	NA|373aa|down_9|NZ_CP046584.1_2560381_2561500_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT
GCF_009749345.1_ASM974934v1	NZ_CP046583	Burkholderia pseudomallei strain B03 chromosome 2, complete sequence	1	600901-601034	1	CRISPRCasFinder	no		cas3,csa3,RT	Orphan	GCATCCCGATGATCGGGTATTCCG	24	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|140aa|up_3|NZ_CP046583.1_594717_595137_-,NA|144aa|down_3|NZ_CP046583.1_606790_607222_-,NA|37aa|down_5|NZ_CP046583.1_608464_608575_+,NA|109aa|down_9|NZ_CP046583.1_611215_611542_-	NA|369aa|up_9|NZ_CP046583.1_587752_588859_+	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|145aa|up_8|NZ_CP046583.1_589243_589678_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|218aa|up_7|NZ_CP046583.1_589727_590381_-	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|150aa|up_6|NZ_CP046583.1_590848_591298_+	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|611aa|up_5|NZ_CP046583.1_591759_593592_-	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|344aa|up_4|NZ_CP046583.1_593588_594620_-	PRK07877, PRK07877, Rv1355c family protein	NA|140aa|up_3|NZ_CP046583.1_594717_595137_-	NA	NA|604aa|up_2|NZ_CP046583.1_595153_596965_-	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|595aa|up_1|NZ_CP046583.1_597039_598824_-	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|422aa|up_0|NZ_CP046583.1_599096_600362_-	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|132aa|down_0|NZ_CP046583.1_601758_602154_+	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|759aa|down_1|NZ_CP046583.1_602286_604563_+	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|553aa|down_2|NZ_CP046583.1_604834_606493_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|144aa|down_3|NZ_CP046583.1_606790_607222_-	NA	NA|312aa|down_4|NZ_CP046583.1_607402_608338_-	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|37aa|down_5|NZ_CP046583.1_608464_608575_+	NA	NA|372aa|down_6|NZ_CP046583.1_608635_609751_+	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|147aa|down_7|NZ_CP046583.1_610052_610493_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|102aa|down_8|NZ_CP046583.1_610578_610884_+	cd05299, CtBP_dh, C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor	NA|109aa|down_9|NZ_CP046583.1_611215_611542_-	NA
GCF_009749345.1_ASM974934v1	NZ_CP046583	Burkholderia pseudomallei strain B03 chromosome 2, complete sequence	2	672215-672339	2	CRISPRCasFinder	no		cas3,csa3,RT	Orphan	CGAGGCGGAACGCCGGGCGCGCCGCCGCGCACGGC	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|60aa|up_9|NZ_CP046583.1_664589_664769_-,NA|83aa|up_8|NZ_CP046583.1_664902_665151_-,NA|100aa|up_7|NZ_CP046583.1_665443_665743_+,NA|90aa|up_6|NZ_CP046583.1_666946_667216_+,NA|119aa|up_5|NZ_CP046583.1_667522_667879_+,NA|99aa|up_4|NZ_CP046583.1_667915_668212_+,NA|117aa|up_2|NZ_CP046583.1_670143_670494_-,NA|115aa|up_1|NZ_CP046583.1_670943_671288_+,NA	NA|60aa|up_9|NZ_CP046583.1_664589_664769_-	NA	NA|83aa|up_8|NZ_CP046583.1_664902_665151_-	NA	NA|100aa|up_7|NZ_CP046583.1_665443_665743_+	NA	NA|90aa|up_6|NZ_CP046583.1_666946_667216_+	NA	NA|119aa|up_5|NZ_CP046583.1_667522_667879_+	NA	NA|99aa|up_4|NZ_CP046583.1_667915_668212_+	NA	NA|286aa|up_3|NZ_CP046583.1_668608_669466_+	pfam06629, MipA, MltA-interacting protein MipA	NA|117aa|up_2|NZ_CP046583.1_670143_670494_-	NA	NA|115aa|up_1|NZ_CP046583.1_670943_671288_+	NA	NA|186aa|up_0|NZ_CP046583.1_671513_672071_+	pfam11448, DUF3005, Protein of unknown function (DUF3005)	NA|170aa|down_0|NZ_CP046583.1_672535_673045_+	pfam05974, DUF892, Domain of unknown function (DUF892)	NA|299aa|down_1|NZ_CP046583.1_673445_674342_-	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|253aa|down_2|NZ_CP046583.1_674400_675159_-	pfam14344, DUF4397, Domain of unknown function (DUF4397)	NA|492aa|down_3|NZ_CP046583.1_675833_677309_+	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional	NA|63aa|down_4|NZ_CP046583.1_677374_677563_+	pfam11450, DUF3008, Protein of unknwon function (DUF3008)	NA|54aa|down_5|NZ_CP046583.1_677607_677769_+	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|144aa|down_6|NZ_CP046583.1_677803_678235_+	pfam11226, DUF3022, Protein of unknown function (DUF3022)	NA|709aa|down_7|NZ_CP046583.1_678370_680497_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|168aa|down_8|NZ_CP046583.1_680519_681023_+	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|366aa|down_9|NZ_CP046583.1_681102_682200_+	TIGR02772, conserved_hypothetical_protein, Ku protein, prokaryotic
GCF_009749345.1_ASM974934v1	NZ_CP046583	Burkholderia pseudomallei strain B03 chromosome 2, complete sequence	3	1050174-1050266	3	CRISPRCasFinder	no		cas3,csa3,RT	Orphan	TCGCCGCCGCGCGCGACGACGCGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|57aa|up_9|NZ_CP046583.1_1040899_1041070_+,NA|86aa|up_5|NZ_CP046583.1_1045960_1046218_-,NA|168aa|down_3|NZ_CP046583.1_1054843_1055347_+,NA|170aa|down_4|NZ_CP046583.1_1055404_1055914_-,NA|53aa|down_6|NZ_CP046583.1_1058111_1058270_-	NA|57aa|up_9|NZ_CP046583.1_1040899_1041070_+	NA	NA|393aa|up_8|NZ_CP046583.1_1041446_1042625_-	PRK07058, PRK07058, acetate/propionate family kinase	NA|477aa|up_7|NZ_CP046583.1_1042621_1044052_-	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|598aa|up_6|NZ_CP046583.1_1044035_1045829_-	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|86aa|up_5|NZ_CP046583.1_1045960_1046218_-	NA	NA|529aa|up_4|NZ_CP046583.1_1046189_1047776_+	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|152aa|up_3|NZ_CP046583.1_1047765_1048221_+	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|103aa|up_2|NZ_CP046583.1_1048703_1049012_+	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|234aa|up_1|NZ_CP046583.1_1049008_1049710_+	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|83aa|up_0|NZ_CP046583.1_1049706_1049955_+	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|663aa|down_0|NZ_CP046583.1_1050701_1052690_+	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|283aa|down_1|NZ_CP046583.1_1052686_1053535_+	pfam00231, ATP-synt, ATP synthase	NA|342aa|down_2|NZ_CP046583.1_1053741_1054767_+	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|168aa|down_3|NZ_CP046583.1_1054843_1055347_+	NA	NA|170aa|down_4|NZ_CP046583.1_1055404_1055914_-	NA	NA|522aa|down_5|NZ_CP046583.1_1056454_1058020_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|53aa|down_6|NZ_CP046583.1_1058111_1058270_-	NA	NA|612aa|down_7|NZ_CP046583.1_1058375_1060211_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|375aa|down_8|NZ_CP046583.1_1060360_1061485_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|1071aa|down_9|NZ_CP046583.1_1061487_1064700_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_009749345.1_ASM974934v1	NZ_CP046583	Burkholderia pseudomallei strain B03 chromosome 2, complete sequence	4	1722489-1722669	4	CRISPRCasFinder	no		cas3,csa3,RT	Orphan	AACCGACAACCGATAACCGATAACCGATAACCGATAACCGA	41	1	4	1722600-1722628|1722600-1722628|1722600-1722628|1722600-1722628	NZ_CP046583.1_1722642-1722670|NZ_CP046583.1_1722649-1722677|NZ_CP046583.1_1722656-1722684|NZ_CP046583.1_1722663-1722691	NA	2	2	Orphan	DEDDh,DinG,csa3,WYL,cas3,RT	NA|130aa|up_8|NZ_CP046583.1_1713186_1713576_-,NA|44aa|down_0|NZ_CP046583.1_1722743_1722875_+,NA|62aa|down_2|NZ_CP046583.1_1723843_1724029_-	NA|342aa|up_9|NZ_CP046583.1_1712016_1713042_-	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|130aa|up_8|NZ_CP046583.1_1713186_1713576_-	NA	NA|205aa|up_7|NZ_CP046583.1_1714094_1714709_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|279aa|up_6|NZ_CP046583.1_1714705_1715542_-	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|521aa|up_5|NZ_CP046583.1_1715566_1717129_-	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing	NA|147aa|up_4|NZ_CP046583.1_1717546_1717987_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|281aa|up_3|NZ_CP046583.1_1718032_1718875_-	pfam09370, PEP_hydrolase, Phosphoenolpyruvate hydrolase-like	NA|406aa|up_2|NZ_CP046583.1_1718877_1720095_-	PRK02399, PRK02399, hypothetical protein; Provisional	NA|357aa|up_1|NZ_CP046583.1_1720206_1721277_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|285aa|up_0|NZ_CP046583.1_1721531_1722386_-	PRK00768, nadE, ammonia-dependent NAD(+) synthetase	NA|44aa|down_0|NZ_CP046583.1_1722743_1722875_+	NA	NA|302aa|down_1|NZ_CP046583.1_1722852_1723758_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|62aa|down_2|NZ_CP046583.1_1723843_1724029_-	NA	NA|344aa|down_3|NZ_CP046583.1_1724981_1726013_-	PRK10083, PRK10083, putative oxidoreductase; Provisional	NA|403aa|down_4|NZ_CP046583.1_1726061_1727270_-	PRK15072, PRK15072, D-galactonate dehydratase family protein	NA|256aa|down_5|NZ_CP046583.1_1727291_1728059_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|490aa|down_6|NZ_CP046583.1_1728191_1729661_+	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]	NA|452aa|down_7|NZ_CP046583.1_1729961_1731317_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|253aa|down_8|NZ_CP046583.1_1731928_1732687_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|602aa|down_9|NZ_CP046583.1_1733408_1735214_+	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium
