The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	776095	786732	2818171		uncultured_Caudovirales_phage(71.43%)	9	NA	NA
WP_000193751.1|776095_777601_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001068501.1|778462_779329_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|780129_780528_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|780490_782596_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|782713_783685_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|783865_784021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|784059_785031_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|785017_785974_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|785970_786732_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 2
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	1031660	1040133	2818171		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861573.1|1031660_1032143_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010413.1|1032129_1033254_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1033257_1033962_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1033961_1034225_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1034226_1034898_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000032740.1|1034890_1037080_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|1037058_1038543_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|1038535_1039564_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|1039566_1040133_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 3
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	1481612	1568132	2818171	head,tail,integrase,holin,portal,tRNA,capsid,protease,terminase	Staphylococcus_phage(80.77%)	106	1520637:1520654	1566649:1566666
WP_000858779.1|1481612_1482905_-|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000525078.1|1483226_1485920_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049921.1|1485943_1486915_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361540.1|1486901_1488104_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000690025.1|1488108_1489251_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1489494_1489812_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1490147_1490828_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154683.1|1490899_1491487_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005212.1|1491476_1492052_-	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000389524.1|1492065_1493310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000253231.1|1493316_1494615_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776312.1|1494624_1495689_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269921.1|1495714_1496881_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000789522.1|1497266_1497467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1497675_1498125_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001817755.1|1498216_1499161_-	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|1499177_1499903_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1499905_1500478_-	heptaprenyl pyrophosphate synthase subunit A	NA	NA	NA	NA	NA
WP_001043863.1|1500908_1501181_-	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161745.1|1501351_1502350_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1502366_1503677_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133961.1|1503898_1505074_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001800578.1|1505330_1505522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001795818.1|1505602_1505755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644391.1|1505785_1506445_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681757.1|1506521_1507490_+	asparaginase	NA	NA	NA	NA	NA
WP_001174258.1|1507604_1508591_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001792205.1|1508751_1508868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156668015.1|1508992_1510453_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902099.1|1510605_1511985_-	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_031774347.1|1511974_1512928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151997.1|1513035_1513284_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186912.1|1513389_1513935_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000913227.1|1514336_1515293_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001557351.1|1515433_1515688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000476354.1|1515763_1516660_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476865.1|1516717_1517623_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000209712.1|1517712_1517928_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_000909205.1|1518650_1520105_-	CHAP domain-containing protein	NA	A0A2I6PF47	Staphylococcus_phage	99.6	2.8e-288
WP_000339141.1|1520115_1520418_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000466784.1|1520553_1520853_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
1520637:1520654	attL	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
WP_000916020.1|1520898_1521063_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1521055_1521445_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000067132.1|1521444_1522911_-	DUF2479 domain-containing protein	NA	B5WZQ8	Staphylococcus_phage	100.0	7.6e-257
WP_000429551.1|1522910_1524821_-	minor structural protein	NA	A0A2I6PF35	Staphylococcus_phage	100.0	0.0e+00
WP_000179864.1|1524836_1525127_-	hypothetical protein	NA	R4WEC3	Staphylococcus_phage	100.0	2.1e-49
WP_000384474.1|1525126_1526710_-	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_001190533.1|1526718_1527543_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_001003458.1|1527542_1533743_-|tail	phage tail tape measure protein	tail	A0A2I6PF36	Staphylococcus_phage	99.2	0.0e+00
WP_000438833.1|1533756_1533915_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589165.1|1533956_1534307_-	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
WP_000169128.1|1534364_1534820_-	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000807536.1|1534911_1535553_-|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_001023802.1|1535587_1535983_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|1535983_1536385_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395501.1|1536381_1536714_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000050973.1|1536725_1537004_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_001142739.1|1537072_1538236_-|capsid	phage major capsid protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
WP_000061872.1|1538247_1539021_-|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	100.0	9.2e-137
WP_001100660.1|1539004_1540243_-|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.5	2.0e-234
WP_000152858.1|1540247_1541939_-|terminase	terminase large subunit	terminase	A0A2K9VBQ1	Staphylococcus_phage	100.0	0.0e+00
WP_000778935.1|1541928_1542234_-|terminase	P27 family phage terminase small subunit	terminase	U5U414	Staphylococcus_phage	100.0	2.9e-49
WP_000166884.1|1542358_1542679_-	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	99.1	1.1e-56
WP_000513704.1|1542835_1543273_-	transcriptional regulator	NA	A0A2K9VBV2	Staphylococcus_phage	100.0	6.1e-77
WP_078069123.1|1543285_1544653_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.6	6.6e-263
WP_000665205.1|1544633_1544924_-	VRR-NUC domain-containing protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
WP_015978074.1|1545057_1545162_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_156668016.1|1545264_1547712_-	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	99.8	0.0e+00
WP_000265258.1|1547764_1547965_-	DUF1514 domain-containing protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000595269.1|1548032_1548185_-	transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	98.0	1.3e-18
WP_001799187.1|1548181_1548577_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.3e-66
WP_000608283.1|1548560_1548797_-	hypothetical protein	NA	A7TWI0	Staphylococcus_phage	100.0	3.6e-36
WP_000141259.1|1548789_1548993_-	hypothetical protein	NA	A7TWH9	Staphylococcus_phage	100.0	8.8e-31
WP_000195832.1|1548989_1549196_-	DUF1381 domain-containing protein	NA	A7TWH8	Staphylococcus_phage	97.1	4.9e-29
WP_156668017.1|1549232_1549769_-	dUTPase	NA	M1SNY5	Staphylococcus_phage	98.9	3.6e-95
WP_078064235.1|1549761_1549956_-	hypothetical protein	NA	M1SVE4	Staphylococcus_phage	100.0	8.2e-26
WP_001065040.1|1549918_1550173_-	DUF1024 family protein	NA	B5WZN0	Staphylococcus_phage	98.8	5.0e-39
WP_000132194.1|1550187_1550430_-	hypothetical protein	NA	A0A2I6PEV3	Staphylococcus_phage	100.0	1.5e-40
WP_000235324.1|1550444_1550645_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
WP_000022728.1|1550647_1550905_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
WP_000113974.1|1550904_1551306_-	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_001164629.1|1551305_1551491_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_156668018.1|1551503_1553456_-	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	99.4	0.0e+00
WP_000645042.1|1553524_1554082_-	DUF2815 family protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
WP_000762527.1|1554108_1555275_-	DUF2800 domain-containing protein	NA	A0A2I6PEL9	Staphylococcus_phage	98.7	2.9e-219
WP_000985972.1|1555271_1555634_-	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
WP_000174998.1|1555648_1555972_-	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_001285954.1|1556050_1556212_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124160.1|1556224_1556488_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001097552.1|1556512_1556728_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|1556782_1557148_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001025401.1|1557116_1557362_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_000773059.1|1557428_1557809_+	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001148860.1|1557795_1557993_-	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000362644.1|1558062_1558275_+	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_000435357.1|1558479_1558923_-	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
WP_000213811.1|1558970_1559183_-	helix-turn-helix transcriptional regulator	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
WP_000511090.1|1559334_1560066_+	helix-turn-helix transcriptional regulator	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
WP_000705240.1|1560135_1560318_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001795334.1|1560353_1560500_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000191466.1|1560496_1561111_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264750.1|1561236_1562442_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.8	2.2e-222
WP_001795335.1|1562484_1564512_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	99.5	4.8e-116
WP_001557355.1|1564504_1565431_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987774.1|1565674_1567426_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
1566649:1566666	attR	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
WP_000064078.1|1567406_1568132_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 4
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	1704416	1713459	2818171	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1704416_1704935_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_156668026.1|1704956_1707230_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|1707432_1709712_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1709986_1710247_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1710265_1711405_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1711427_1712453_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1712454_1713459_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 5
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	1843603	1904935	2818171	protease,tRNA	Staphylococcus_phage(95.56%)	57	NA	NA
WP_001050568.1|1843603_1850164_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|1850489_1850801_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001108730.1|1850822_1853237_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1853527_1854709_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1854818_1855772_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1855768_1856332_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1856454_1856856_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1857427_1858255_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1858257_1858377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|1858487_1859489_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|1859610_1860075_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1860087_1861269_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1861279_1861912_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000384185.1|1861918_1862950_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
WP_001261668.1|1863442_1864945_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1865467_1865782_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1865781_1867074_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|1867160_1868015_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1868290_1868515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1868713_1869184_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1869296_1869740_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1869726_1870170_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_156668030.1|1870465_1871101_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1871540_1872254_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1872513_1872816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1873071_1873437_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1873433_1873787_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1875783_1876617_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1876828_1877737_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1877858_1879055_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1879426_1881019_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|1881396_1882143_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_156668031.1|1882147_1882621_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	2.1e-83
WP_000718107.1|1882686_1882944_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1882940_1883942_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1883946_1885425_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1885583_1886039_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1886341_1886992_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1887072_1888068_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1888142_1888769_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1888809_1889151_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1889251_1889824_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1891178_1891274_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1891396_1891498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|1892573_1893803_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_078240834.1|1893795_1895535_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.8	4.0e-289
WP_001791797.1|1895515_1895650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038702.1|1895712_1896432_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
WP_001038872.1|1896552_1897272_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1897329_1898052_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|1898176_1898884_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|1899847_1900429_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000469591.1|1900901_1901120_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_000550252.1|1901375_1901849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1901853_1902645_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1903014_1903998_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_156668032.1|1903999_1904935_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	1.1e-173
>prophage 6
NZ_CP034259	Staphylococcus aureus strain P1D12C1 chromosome, complete genome	2818171	1998682	2093324	2818171	head,tail,integrase,holin,portal,tRNA,capsid,protease,terminase	Staphylococcus_phage(86.67%)	112	1995119:1995143	2095610:2095634
1995119:1995143	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000170162.1|1998682_1998985_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|1999351_2000890_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|2000978_2002178_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|2002190_2004194_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|2004197_2006390_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|2006386_2007079_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2007250_2007553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2007661_2008957_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|2009816_2010983_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2011013_2011340_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2011631_2011805_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2011785_2012388_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|2012658_2013480_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|2013472_2014942_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|2015125_2016202_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|2016221_2017016_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2017087_2017195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2017205_2018768_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|2018972_2020070_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|2020438_2020999_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2021051_2021981_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|2022173_2022347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021211.1|2022398_2023778_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|2023897_2024926_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2025195_2025597_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2026169_2026343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|2026793_2027834_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2027890_2028733_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2028729_2029287_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_156668034.1|2029346_2029871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000182842.1|2029991_2030555_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2030620_2031361_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|2031360_2032233_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_156668035.1|2032229_2032910_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|2032910_2033807_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|2033803_2034184_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2034441_2034618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2034860_2034959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2035158_2036445_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_078101919.1|2036723_2037032_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001558588.1|2037024_2038458_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|2039415_2039595_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2039912_2040173_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|2040225_2040576_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000727645.1|2041258_2041708_+	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000920042.1|2042783_2043275_-	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
WP_002955266.1|2043465_2044221_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.6	7.6e-152
WP_000611512.1|2044232_2044487_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|2044538_2044646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2044698_2044875_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000034846.1|2045077_2045860_-	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	1.6e-149
WP_000340977.1|2046271_2046646_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262621.1|2046701_2046989_-	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_001000058.1|2047034_2047187_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_156668036.1|2047179_2050962_-	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	98.3	0.0e+00
WP_000567396.1|2050977_2052462_-|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_000504568.1|2052458_2056988_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	97.0	0.0e+00
WP_001096355.1|2057232_2057583_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2057632_2057857_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|2057898_2058543_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|2058543_2058951_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|2058947_2059352_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|2059348_2059711_-|head,tail	phage head-tail adapter protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2059694_2059979_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|2059968_2060253_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|2060272_2061418_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|2061441_2062179_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|2062162_2063350_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_112380264.1|2063365_2065027_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	99.8	0.0e+00
WP_000402904.1|2065023_2065368_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_064125997.1|2065497_2065797_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	99.0	7.9e-52
WP_000590122.1|2066028_2066445_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001557462.1|2066472_2066673_-	DUF1514 domain-containing protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000595265.1|2066672_2066822_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195784.1|2066818_2067025_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_001282077.1|2067021_2067267_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000185693.1|2067303_2067840_-	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001065108.1|2067836_2068082_-	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000178987.1|2068096_2068345_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_000111491.1|2068341_2068599_-	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000101279.1|2068598_2068970_-	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000401969.1|2068982_2069387_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000338528.1|2069395_2069614_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_156668037.1|2069620_2070514_-	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	99.7	1.2e-140
WP_000934759.1|2070543_2071014_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_064135358.1|2071014_2071632_-	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000180600.1|2071712_2072633_-	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_001205732.1|2074579_2074843_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|2074851_2075112_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|2075116_2075419_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000048129.1|2075513_2075675_-	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_001120201.1|2075671_2075995_-	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000762521.1|2076049_2076430_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148856.1|2076416_2076614_-	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_001148605.1|2076629_2077382_-	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_000128909.1|2077432_2077762_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	98.2	5.1e-52
WP_001025404.1|2077750_2077966_-	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000854072.1|2077981_2078245_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001031454.1|2078378_2079092_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000759682.1|2079107_2080040_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_000591749.1|2080045_2080387_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000694772.1|2080590_2080773_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_001558608.1|2080872_2081856_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000427213.1|2081866_2082109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000857180.1|2082171_2083209_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	98.6	1.4e-175
WP_000595392.1|2084327_2085344_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|2085365_2086421_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|2086856_2088080_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|2088582_2089890_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2090429_2092046_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2092121_2092406_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_156668038.1|2092580_2093324_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2095610:2095634	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
