assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009738225.1_ASM973822v1	NZ_CP018187	Streptococcus salivarius strain ICDC2, complete genome	1	230389-230584	1	CRISPRCasFinder	no		cas3,RT,DEDDh,csa3,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,WYL	Orphan	AAACTTGTCAACATTGTTGTGAAATAA	27	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,DEDDh,csa3,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,WYL	NA,NA	NA|102aa|up_9|NZ_CP018187.1_220193_220499_-	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|111aa|up_8|NZ_CP018187.1_220498_220831_-	pfam05154, TM2, TM2 domain	NA|290aa|up_7|NZ_CP018187.1_221015_221885_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|776aa|up_6|NZ_CP018187.1_221950_224278_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|51aa|up_5|NZ_CP018187.1_224326_224479_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|59aa|up_4|NZ_CP018187.1_224487_224664_+	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|180aa|up_3|NZ_CP018187.1_224864_225404_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|163aa|up_2|NZ_CP018187.1_225530_226019_+	cd03395, PAP2_like_4, PAP2_like_4 proteins	NA|270aa|up_1|NZ_CP018187.1_226150_226960_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|256aa|up_0|NZ_CP018187.1_226952_227720_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|152aa|down_0|NZ_CP018187.1_230680_231136_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|138aa|down_1|NZ_CP018187.1_232567_232981_+	pfam11208, DUF2992, Protein of unknown function (DUF2992)	NA|102aa|down_2|NZ_CP018187.1_233080_233386_-	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown]	NA|106aa|down_3|NZ_CP018187.1_233473_233791_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|289aa|down_4|NZ_CP018187.1_233916_234783_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|281aa|down_5|NZ_CP018187.1_234782_235625_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|152aa|down_6|NZ_CP018187.1_235643_236099_+	pfam04397, LytTR, LytTr DNA-binding domain	NA|142aa|down_7|NZ_CP018187.1_236108_236534_+	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|237aa|down_8|NZ_CP018187.1_236623_237334_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|228aa|down_9|NZ_CP018187.1_237552_238236_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein
GCF_009738225.1_ASM973822v1	NZ_CP018187	Streptococcus salivarius strain ICDC2, complete genome	2	1139218-1141784	1,2,1	CRT,CRISPRCasFinder,PILER-CR	no	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2	cas3,RT,DEDDh,csa3,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,WYL	Type III-A,Type III-D,Type III-C,Type III-B	GTTNCCGTCCCCTCNCGAGGT,CTCTCGAGGTATATAGGTTTATATC,GGTTTCCGTCCCCTCTCGAGGTGAATAGGTTTATATCAC	21,25,39	0	0	NA	NA	NA:NA:II-B,III-A	35,35,2	35	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	cas3,RT,DEDDh,csa3,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,WYL	NA,NA	NA|210aa|up_9|NZ_CP018187.1_1128964_1129594_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|232aa|up_8|NZ_CP018187.1_1129681_1130377_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	csm6|429aa|up_7|NZ_CP018187.1_1130578_1131865_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm6|387aa|up_6|NZ_CP018187.1_1131879_1133040_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|359aa|up_5|NZ_CP018187.1_1133036_1134113_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|300aa|up_4|NZ_CP018187.1_1134115_1135015_-	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain	csm3gr7|221aa|up_3|NZ_CP018187.1_1135016_1135679_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|131aa|up_2|NZ_CP018187.1_1135678_1136071_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|767aa|up_1|NZ_CP018187.1_1136074_1138375_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|244aa|up_0|NZ_CP018187.1_1138355_1139087_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas2|110aa|down_0|NZ_CP018187.1_1141882_1142212_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|319aa|down_1|NZ_CP018187.1_1143355_1144312_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|268aa|down_2|NZ_CP018187.1_1144321_1145125_-	PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed	NA|183aa|down_3|NZ_CP018187.1_1145434_1145983_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|267aa|down_4|NZ_CP018187.1_1146115_1146916_-	pfam05857, TraX, TraX protein	NA|553aa|down_5|NZ_CP018187.1_1147592_1149251_+	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA)	NA|515aa|down_6|NZ_CP018187.1_1149424_1150969_+	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein	NA|447aa|down_7|NZ_CP018187.1_1151019_1152360_+	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|323aa|down_8|NZ_CP018187.1_1152405_1153374_-	cd01140, FatB, Siderophore binding protein FatB	NA|905aa|down_9|NZ_CP018187.1_1155042_1157757_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]
GCF_009738225.1_ASM973822v1	NZ_CP018188	Streptococcus salivarius strain ICDC2 plasmid, complete sequence	1	106824-106917	1	CRISPRCasFinder	no			Orphan	GGTTTTGTTACTGTTCTATTTGACATGG	28	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DEDDh,csa3,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,WYL	NA|121aa|up_8|NZ_CP018188.1_98670_99033_+,NA|211aa|up_6|NZ_CP018188.1_99970_100603_+,NA|231aa|up_5|NZ_CP018188.1_100596_101289_+,NA|62aa|up_4|NZ_CP018188.1_101555_101741_+,NA|182aa|up_3|NZ_CP018188.1_102415_102961_+,NA|298aa|up_2|NZ_CP018188.1_103116_104010_+,NA|243aa|up_1|NZ_CP018188.1_104316_105045_+,NA|431aa|up_0|NZ_CP018188.1_105369_106662_+,NA|107aa|down_0|NZ_CP018188.1_107569_107890_+,NA|123aa|down_1|NZ_CP018188.1_107902_108271_+,NA|97aa|down_5|NZ_CP018188.1_111350_111641_+,NA|103aa|down_6|NZ_CP018188.1_111694_112003_+,NA|163aa|down_8|NZ_CP018188.1_112883_113372_+	NA|303aa|up_9|NZ_CP018188.1_97744_98653_+	pfam13814, Replic_Relax, Replication-relaxation	NA|121aa|up_8|NZ_CP018188.1_98670_99033_+	NA	NA|266aa|up_7|NZ_CP018188.1_99173_99971_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|211aa|up_6|NZ_CP018188.1_99970_100603_+	NA	NA|231aa|up_5|NZ_CP018188.1_100596_101289_+	NA	NA|62aa|up_4|NZ_CP018188.1_101555_101741_+	NA	NA|182aa|up_3|NZ_CP018188.1_102415_102961_+	NA	NA|298aa|up_2|NZ_CP018188.1_103116_104010_+	NA	NA|243aa|up_1|NZ_CP018188.1_104316_105045_+	NA	NA|431aa|up_0|NZ_CP018188.1_105369_106662_+	NA	NA|107aa|down_0|NZ_CP018188.1_107569_107890_+	NA	NA|123aa|down_1|NZ_CP018188.1_107902_108271_+	NA	NA|143aa|down_2|NZ_CP018188.1_108285_108714_+	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|283aa|down_3|NZ_CP018188.1_108787_109636_+	pfam12684, DUF3799, PDDEXK-like domain of unknown function (DUF3799)	NA|336aa|down_4|NZ_CP018188.1_109690_110698_+	pfam04404, ERF, ERF superfamily	NA|97aa|down_5|NZ_CP018188.1_111350_111641_+	NA	NA|103aa|down_6|NZ_CP018188.1_111694_112003_+	NA	NA|219aa|down_7|NZ_CP018188.1_112211_112868_+	PRK00024, PRK00024, DNA repair protein RadC	NA|163aa|down_8|NZ_CP018188.1_112883_113372_+	NA	NA|148aa|down_9|NZ_CP018188.1_113424_113868_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
