The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	206548	260234	2796178	transposase,tRNA	uncultured_Mediterranean_phage(20.0%)	48	NA	NA
WP_002287522.1|206548_206953_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002287525.1|206969_208118_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002296565.1|209068_210100_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002289743.1|210718_213358_+	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	31.2	1.6e-84
WP_002296566.1|213525_214224_-	DUF975 family protein	NA	NA	NA	NA	NA
WP_002294183.1|214441_215587_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.9	2.5e-82
WP_002294182.1|215683_216064_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_002296567.1|216368_218966_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002288261.1|219194_220301_+	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_002300788.1|221347_221827_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_086953915.1|222452_223791_+|transposase	IS3-like element ISEnfa3 family transposase	transposase	A0A1B1P773	Bacillus_phage	52.7	2.6e-78
WP_126145175.1|223835_224042_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_002300046.1|224023_224329_+	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA	NA
WP_033582433.1|224348_225152_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002300048.1|225400_226465_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_002288233.1|226461_227547_-	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_002300050.1|227559_228537_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_002288231.1|228529_229474_-	mevalonate kinase	NA	NA	NA	NA	NA
WP_002300051.1|229795_230449_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	52.3	1.5e-58
WP_002300052.1|230533_231439_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002300053.1|231440_232073_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002293357.1|232392_232917_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	1.4e-14
WP_002289309.1|232988_233189_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002289310.1|233241_233601_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002341586.1|234036_234378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296840.1|234484_235672_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_080388548.1|235768_236665_+	citrate transporter	NA	NA	NA	NA	NA
WP_002341584.1|236712_238842_+	hydantoinase/oxoprolinase	NA	NA	NA	NA	NA
WP_002302159.1|238816_239506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289316.1|239913_240600_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002315615.1|240735_240930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301667.1|240979_241420_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_002301666.1|241423_242269_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_002294157.1|242417_243836_+	dipeptidase PepV	NA	NA	NA	NA	NA
WP_002299302.1|243911_245114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299301.1|245100_246888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299300.1|246900_247854_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_002309710.1|248038_248389_-	peptidase	NA	NA	NA	NA	NA
WP_002294156.1|248588_249668_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_002292632.1|249810_250131_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_002345012.1|250152_250617_+	universal stress protein	NA	NA	NA	NA	NA
WP_002313997.1|250812_251418_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_002290101.1|251456_252746_-	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	30.2	5.7e-22
WP_002345011.1|253173_253653_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_138013243.1|254152_255061_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_156264966.1|255282_258324_+	DEAD/DEAH box helicase family protein	NA	A0A220A398	Liberibacter_phage	23.1	2.0e-17
WP_002348733.1|258513_259098_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_010782519.1|259094_260234_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	688433	696905	2796178		Streptococcus_phage(66.67%)	9	NA	NA
WP_002294039.1|688433_689078_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|689092_689422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288071.1|689435_690374_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002288073.1|690409_691234_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|691226_691574_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288078.1|691642_692515_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002294035.1|692623_693745_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|693798_694401_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|694715_696905_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
>prophage 3
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	751428	848192	2796178	protease,capsid,transposase,portal,integrase,terminase,tRNA,holin,head,tail	Enterococcus_phage(25.53%)	107	806645:806660	809996:810011
WP_002296621.1|751428_754227_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	2.1e-74
WP_002286618.1|754275_755802_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
WP_002286616.1|755816_756464_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286678.1|756647_756977_-	DUF4828 domain-containing protein	NA	NA	NA	NA	NA
WP_002286614.1|757153_757882_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_002286612.1|757897_758911_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002286608.1|758910_760188_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
WP_002286607.1|760250_762953_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286606.1|763104_763422_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002286604.1|763451_763772_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_012197774.1|763879_765340_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002286598.1|765407_765629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286596.1|765659_765842_+	DUF3188 domain-containing protein	NA	NA	NA	NA	NA
WP_002286592.1|765841_766255_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
WP_002286589.1|766377_767559_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_149558030.1|768089_769229_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	47.1	2.0e-95
WP_002296617.1|769527_770163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002336314.1|770275_770911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002336315.1|770944_771406_-	DUF4429 domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	33.3	7.7e-06
WP_025479544.1|771489_771918_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002315392.1|771922_772297_-	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	38.7	3.2e-18
WP_002317758.1|772598_772784_+	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	55.0	1.1e-11
WP_047927434.1|772796_773117_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_060854001.1|773121_773301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002317844.1|773420_773999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002317843.1|774037_774736_+	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	34.6	1.7e-25
WP_002303273.1|774917_775253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085837496.1|775485_776427_+	endonuclease	NA	D2IZK1	Enterococcus_phage	78.9	2.0e-146
WP_162225019.1|776428_777319_+	recombinase RecT	NA	D2IYT9	Enterococcus_phage	84.1	1.8e-136
WP_085837494.1|777361_778162_+	replication protein	NA	B4XYS6	Lactobacillus_phage	54.9	2.3e-58
WP_002299339.1|778176_779028_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.2	2.3e-27
WP_002317474.1|779024_779342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305847.1|779334_779517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060808624.1|779524_779911_+	hypothetical protein	NA	A0A2H4JBP1	uncultured_Caudovirales_phage	36.9	2.8e-09
WP_085837492.1|779907_780243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085837490.1|780242_780473_+	hypothetical protein	NA	A0A0S2MYD2	Enterococcus_phage	52.1	2.1e-12
WP_085837488.1|780479_780677_+	toxin PIN	NA	NA	NA	NA	NA
WP_085837486.1|780673_780880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085837484.1|780879_781173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002341971.1|781202_781643_+	transcriptional regulator	NA	D2IYV6	Enterococcus_phage	38.4	5.3e-20
WP_002305391.1|781717_782185_+	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	28.5	2.4e-07
WP_002318105.1|782507_783146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305386.1|783677_784022_+	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	58.1	1.0e-26
WP_002299164.1|784026_784308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286538.1|784410_784725_+|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002286533.1|784702_786397_+|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286530.1|786416_787595_+|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286527.1|787557_788244_+|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_070873539.1|788243_789404_+|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.4	1.2e-100
WP_156265005.1|789413_790289_+	hypothetical protein	NA	D2IYX3	Enterococcus_phage	73.9	7.3e-130
WP_002318248.1|790285_790597_+	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	43.5	1.1e-11
WP_002286522.1|790586_790940_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_002318246.1|790929_791331_+	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	34.1	3.0e-14
WP_002319774.1|791323_791728_+	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002343573.1|791739_792345_+	hypothetical protein	NA	Q8W5Z9	Listeria_phage	41.2	6.7e-34
WP_002299170.1|792365_792728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305377.1|792730_792913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162225020.1|792929_796349_+|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	41.5	8.7e-78
WP_002305373.1|796399_797137_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_162225021.1|797146_799438_+	hypothetical protein	NA	A0A1D3SNL1	Enterococcus_phage	30.0	3.9e-90
WP_162225022.1|799461_801660_+	hypothetical protein	NA	A0A060AI60	Enterococcus_phage	65.5	2.1e-125
WP_002299182.1|801737_801980_+|holin	holin	holin	D2J075	Enterococcus_phage	68.4	9.6e-24
WP_002334690.1|801995_802193_+|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	82.8	8.6e-23
WP_099124554.1|802203_803223_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.1	7.1e-60
WP_087046766.1|804162_805324_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286474.1|806247_806655_+	hypothetical protein	NA	NA	NA	NA	NA
806645:806660	attL	AAAAAAATTAAGGAGA	NA	NA	NA	NA
WP_002296902.1|806668_807070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|807071_807443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286680.1|807478_807781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286470.1|808029_808230_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	75.7	4.6e-08
WP_002286469.1|808534_809767_-	aminopeptidase	NA	NA	NA	NA	NA
WP_002286467.1|810020_810590_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
809996:810011	attR	AAAAAAATTAAGGAGA	NA	NA	NA	NA
WP_002286465.1|810767_811208_-	flavodoxin	NA	NA	NA	NA	NA
WP_002294533.1|811365_812130_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002286461.1|812161_813085_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_085837449.1|813160_814300_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002286455.1|814292_815093_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286453.1|815092_815920_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002321540.1|815897_816632_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002286449.1|816731_817598_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|817611_818184_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002296544.1|818205_819234_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.2	2.2e-69
WP_002294531.1|819331_820183_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.3e-38
WP_002296543.1|820217_822251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296542.1|822294_823575_+	EpaQ family protein	NA	NA	NA	NA	NA
WP_002289081.1|823784_824591_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002296541.1|824602_825823_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	3.3e-11
WP_002296539.1|825812_827399_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002296538.1|827437_829576_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002297271.1|829643_830603_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_044383074.1|830937_832329_+	sugar transferase	NA	NA	NA	NA	NA
WP_002315330.1|832366_833197_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002325474.1|833168_834158_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	33.6	5.9e-11
WP_002315328.1|834271_835267_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002335549.1|835270_836413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002335550.1|836409_837837_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002285758.1|838250_838445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287659.1|838434_838788_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002296127.1|838889_840437_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_044383080.1|840830_841571_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	49.4	1.1e-59
WP_085837482.1|841560_842799_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	52.4	8.2e-111
WP_025479701.1|842885_843143_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	38.6	3.5e-08
WP_002335552.1|843299_843713_-|transposase	transposase family protein	transposase	NA	NA	NA	NA
WP_002315323.1|843888_844299_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	4.1e-19
WP_002325481.1|844424_845816_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002335553.1|845949_846894_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	37.8	7.3e-51
WP_000195429.1|847019_848192_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
>prophage 4
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	955236	983783	2796178	transposase	Streptococcus_phage(70.0%)	35	NA	NA
WP_000222572.1|955236_956190_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002297183.1|956414_958277_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002291790.1|958276_958609_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002297404.1|958751_960002_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002288314.1|960411_960768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288312.1|960783_961134_+	DUF4312 family protein	NA	NA	NA	NA	NA
WP_002288309.1|961162_961942_+	DUF4311 domain-containing protein	NA	NA	NA	NA	NA
WP_002296962.1|961952_962630_+	DUF4310 family protein	NA	NA	NA	NA	NA
WP_002288305.1|962648_963755_+	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA	NA
WP_002288304.1|963744_964836_+	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA	NA
WP_002288301.1|964848_965589_+	KDGP aldolase family protein	NA	NA	NA	NA	NA
WP_001015311.1|966295_966976_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_025481136.1|967124_969329_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	51.1	2.1e-117
WP_002330563.1|969567_970161_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002322787.1|970176_971076_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002296241.1|971078_971564_+	single-stranded DNA-binding protein	NA	W6LM61	Streptococcus_phage	59.9	3.4e-44
WP_002296240.1|971929_972190_+	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	51.4	3.4e-11
WP_002296239.1|972630_972837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296238.1|972836_973088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296237.1|973102_973540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002353391.1|973532_974240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305761.1|974620_974800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287514.1|975140_975404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321032.1|975397_975748_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_010729795.1|975771_976386_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	31.4	6.4e-16
WP_002303116.1|976699_977122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002299573.1|977131_977335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010861579.1|977895_978576_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	2.9e-126
WP_010861579.1|979135_979816_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	2.9e-126
WP_002304891.1|980703_981099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001224538.1|981423_982041_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	33.1	5.1e-13
WP_000366408.1|982081_982381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000824191.1|982414_982582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010729776.1|982626_983097_-	recombinase family protein	NA	NA	NA	NA	NA
WP_002319817.1|983102_983783_-|transposase	IS6-like element ISS1N family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	84.1	2.5e-109
>prophage 5
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	1070083	1119061	2796178	protease,transposase,tRNA	Bacillus_virus(16.67%)	44	NA	NA
WP_045135963.1|1070083_1071460_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_002288415.1|1071657_1072563_+	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	29.4	9.4e-32
WP_002288419.1|1072599_1073148_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
WP_002288421.1|1073161_1074562_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	28.8	1.7e-43
WP_002290223.1|1074579_1075371_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002296994.1|1075452_1076328_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_002296995.1|1076459_1077098_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_002296996.1|1077224_1077659_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_138821006.1|1077824_1079870_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.2	5.3e-115
WP_002320956.1|1079881_1082332_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	9.2e-98
WP_002289265.1|1082608_1084840_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.5	2.4e-169
WP_002289264.1|1085083_1085845_+	pyruvate formate lyase-activating protein	NA	NA	NA	NA	NA
WP_002289263.1|1085929_1086856_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_002289262.1|1087037_1087931_+	DUF1803 domain-containing protein	NA	NA	NA	NA	NA
WP_002296999.1|1088064_1088190_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289266.1|1088323_1088956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289260.1|1089103_1089646_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_156264936.1|1089780_1090170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289259.1|1090173_1090938_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002289258.1|1091066_1092014_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289257.1|1092143_1092884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297002.1|1093174_1093843_-	membrane protein	NA	NA	NA	NA	NA
WP_002289767.1|1093976_1094264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289765.1|1094679_1096218_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_002289763.1|1096214_1097180_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	2.0e-27
WP_002289757.1|1097166_1098489_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002297003.1|1098729_1099473_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002297008.1|1099487_1100480_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002297010.1|1100491_1101229_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_002297012.1|1101218_1101941_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_002326685.1|1102024_1102648_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	56.4	3.9e-37
WP_002295437.1|1103941_1104232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287522.1|1104523_1104928_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002287525.1|1104944_1106093_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_000997695.1|1107246_1108425_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002347134.1|1108584_1109067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296623.1|1109055_1110351_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002348904.1|1110440_1111064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303757.1|1111769_1112987_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002297129.1|1113170_1114007_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002289803.1|1114082_1115231_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_002289801.1|1115451_1116510_+	malate permease	NA	NA	NA	NA	NA
WP_002289800.1|1116528_1117548_+	lactate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	34.3	1.1e-23
WP_002297218.1|1117765_1119061_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
>prophage 6
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	1139742	1148803	2796178		Gordonia_phage(16.67%)	9	NA	NA
WP_002288023.1|1139742_1141038_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	4.5e-19
WP_002297115.1|1141217_1141595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288021.1|1141850_1142579_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002295474.1|1142578_1142833_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002302316.1|1142834_1143506_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002299012.1|1143506_1145729_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.4	1.1e-150
WP_002299010.1|1145713_1147153_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.9	2.4e-53
WP_002299008.1|1147184_1148228_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.7	2.7e-62
WP_002302314.1|1148224_1148803_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.4	9.0e-28
>prophage 7
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	1416860	1467072	2796178	transposase,protease	Synechococcus_phage(23.08%)	58	NA	NA
WP_002287525.1|1416860_1418009_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|1418025_1418430_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002295138.1|1419546_1420020_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_002295139.1|1420028_1420256_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002295142.1|1420891_1421263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002291278.1|1421518_1421761_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002296679.1|1421792_1422695_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002291274.1|1422707_1422896_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_002296677.1|1422909_1423473_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_002296675.1|1423510_1424404_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.0	8.9e-59
WP_002296674.1|1424481_1425420_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002296672.1|1425453_1425804_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002296671.1|1425836_1426739_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_002296670.1|1426731_1427589_-	glycosyltransferase family 8 protein	NA	A0ZYL4	Archaeal_BJ1_virus	27.1	1.3e-19
WP_002296669.1|1427922_1428732_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002296667.1|1428771_1429269_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002321681.1|1429913_1430237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296665.1|1430400_1430655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296663.1|1430724_1430970_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002296662.1|1431045_1431411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303842.1|1431471_1432035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297218.1|1432683_1433979_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002296656.1|1435076_1435790_-	HAD family phosphatase	NA	A0A1D8KPI1	Synechococcus_phage	23.0	5.4e-06
WP_002296654.1|1435782_1436868_-	mannonate dehydratase	NA	NA	NA	NA	NA
WP_002296653.1|1436884_1437328_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002321678.1|1437361_1437715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296650.1|1437826_1438228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296648.1|1438264_1438774_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002296647.1|1438795_1439653_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002296646.1|1439670_1440504_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002296645.1|1440517_1441315_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002321677.1|1441347_1441632_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002296641.1|1441628_1442630_-	2-hydroxyacid dehydrogenase	NA	M1H9J0	Paramecium_bursaria_Chlorella_virus	29.0	2.8e-24
WP_002296640.1|1442631_1443534_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D8KGX1	Synechococcus_phage	35.3	3.3e-53
WP_002296639.1|1443697_1444546_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296638.1|1445191_1445398_+	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
WP_002296637.1|1445599_1446601_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	31.8	2.5e-09
WP_002296634.1|1448685_1449192_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002296633.1|1449351_1449792_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
WP_002296632.1|1449817_1450975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296631.1|1450977_1451334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296629.1|1451631_1452606_-	LPXTG-anchored fibrinogen/nidogen-binding adhesin SgrA	NA	NA	NA	NA	NA
WP_002296628.1|1452801_1453641_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002296627.1|1453825_1454713_+	rotamase	NA	NA	NA	NA	NA
WP_002311093.1|1455306_1456002_-	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.5	1.0e-22
WP_002296624.1|1455985_1456384_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002297404.1|1456792_1458043_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002296760.1|1458184_1459180_-	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA	NA
WP_002289423.1|1459197_1459752_-	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002289422.1|1459739_1460231_-	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289421.1|1460223_1462092_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002289420.1|1462110_1462911_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.6e-09
WP_002289418.1|1463134_1463350_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002303864.1|1463488_1463974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289415.1|1464429_1464843_+	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_002322258.1|1464979_1465240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321532.1|1465357_1465648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1465893_1467072_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	1647428	1776595	2796178	protease,transposase,tRNA	Streptococcus_phage(27.78%)	113	NA	NA
WP_002289885.1|1647428_1648127_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002289886.1|1648146_1648689_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002319727.1|1648820_1649825_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002293904.1|1649821_1650811_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002325771.1|1650807_1651614_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.3e-13
WP_002293906.1|1651779_1652736_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002296121.1|1652812_1653331_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	7.1e-24
WP_002296119.1|1653418_1653568_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002288531.1|1653795_1654242_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002293915.1|1654436_1656332_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_002317802.1|1656656_1657631_-	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	29.7	6.6e-23
WP_002296332.1|1658198_1658765_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002326251.1|1659019_1660351_+	DUF1576 domain-containing protein	NA	NA	NA	NA	NA
WP_002296335.1|1660316_1660667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002317579.1|1660758_1661178_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002326252.1|1661178_1661523_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_002287776.1|1661872_1662469_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
WP_002297218.1|1662593_1663889_-|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_010729307.1|1664114_1665914_+	glycerophosphodiesterase	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002293930.1|1666191_1666404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002325786.1|1667282_1667669_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002288574.1|1667976_1669323_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_002317577.1|1669434_1670784_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_002288576.1|1670899_1672153_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	7.7e-24
WP_002347404.1|1672223_1672709_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002326253.1|1672731_1673490_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.9	6.5e-26
WP_002322842.1|1673505_1674684_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	5.1e-102
WP_002326254.1|1674913_1677034_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.3	6.3e-220
WP_002297185.1|1677196_1678492_-|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
WP_002296623.1|1678675_1679971_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002326255.1|1680289_1681015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288586.1|1681004_1681514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288588.1|1681583_1683032_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002293942.1|1683031_1683748_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002288595.1|1683728_1684079_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002293945.1|1684222_1684996_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_085838153.1|1685837_1686791_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002323892.1|1687034_1687349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321266.1|1687634_1687874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060806716.1|1688235_1688496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289618.1|1688680_1689178_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002289619.1|1689307_1690018_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_086321942.1|1690030_1691695_-	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_002300930.1|1691899_1692562_-	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_002303949.1|1692571_1693387_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002288989.1|1693648_1694092_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA	NA
WP_002321036.1|1694225_1694564_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002302962.1|1694551_1694929_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002322902.1|1695152_1696346_+	MFS transporter	NA	NA	NA	NA	NA
WP_002288984.1|1696511_1696934_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002303955.1|1697522_1697978_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303963.1|1702443_1704771_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002296840.1|1705042_1706230_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002288970.1|1707087_1707381_-	DUF2087 domain-containing protein	NA	NA	NA	NA	NA
WP_002286913.1|1707638_1707986_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002293717.1|1708121_1708883_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_002293716.1|1708872_1709394_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002297190.1|1709563_1710355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290277.1|1710479_1710731_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_002290274.1|1710742_1711018_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_002293714.1|1711270_1711825_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
WP_002297192.1|1711903_1712425_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_002293710.1|1712428_1713007_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002293709.1|1713118_1714537_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002293708.1|1714557_1714896_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_002297194.1|1714855_1715359_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_002293705.1|1715489_1716194_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_002303966.1|1716190_1717927_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	1.2e-27
WP_002297196.1|1718029_1720501_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	28.8	7.0e-45
WP_002326707.1|1720773_1722048_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	35.9	9.5e-54
WP_002289807.1|1722334_1723225_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA	NA
WP_002300070.1|1723421_1723904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289810.1|1724111_1724477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002326708.1|1724567_1724885_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002301399.1|1725626_1726586_+|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	26.8	2.2e-10
WP_002301623.1|1726708_1727683_-	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	7.1e-25
WP_002297404.1|1728092_1729343_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002295273.1|1729628_1729886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008266934.1|1730117_1730531_-	DUF4231 domain-containing protein	NA	NA	NA	NA	NA
WP_002326711.1|1730787_1731966_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_099098442.1|1733336_1734499_-|transposase	IS3-like element ISEfa8 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	1.8e-80
WP_002301695.1|1735980_1736673_-	hypothetical protein	NA	Q9MCC6	Lactobacillus_phage	43.4	4.0e-30
WP_002294835.1|1737109_1737679_-	prevent-host-death protein	NA	NA	NA	NA	NA
WP_002304701.1|1737752_1738076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294839.1|1738229_1739042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322021.1|1739395_1740244_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_002304699.1|1740388_1741330_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_002299539.1|1745124_1747296_-	copper/silver-translocating P-type ATPase CopB	NA	A0A218MNH6	uncultured_virus	32.3	5.0e-71
WP_156264940.1|1747315_1749502_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.6	6.9e-121
WP_002289040.1|1749501_1749711_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_002332954.1|1749723_1750164_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_002332953.1|1750237_1750777_-	hypothetical protein	NA	A0A097BYE2	Leuconostoc_phage	31.8	1.3e-17
WP_002288779.1|1751146_1752613_-	amino acid permease	NA	NA	NA	NA	NA
WP_002327795.1|1752922_1755004_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.9	1.7e-116
WP_002288776.1|1755527_1755887_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_002323072.1|1755916_1756258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299532.1|1756254_1756929_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002291771.1|1757734_1759033_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.3	9.0e-60
WP_002296294.1|1759072_1760263_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002348809.1|1760283_1760811_-	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_002332952.1|1760857_1763647_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	30.3	2.9e-87
WP_002297185.1|1763850_1765146_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
WP_002288762.1|1765315_1765516_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
WP_002325038.1|1765966_1766287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002340148.1|1766789_1767908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002302201.1|1768378_1769686_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_002302199.1|1769804_1771004_+	membrane protein	NA	NA	NA	NA	NA
WP_002332950.1|1771030_1772299_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.1	4.9e-42
WP_002323864.1|1772461_1773109_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002289559.1|1773516_1774020_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002327792.1|1774142_1774907_-	RNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	26.8	7.5e-06
WP_002289551.1|1775014_1775290_+	acylphosphatase	NA	NA	NA	NA	NA
WP_002297271.1|1775635_1776595_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	1943778	1999381	2796178	transposase,tRNA,holin	Enterococcus_phage(18.18%)	53	NA	NA
WP_002303350.1|1943778_1944738_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002295061.1|1944958_1946062_-	L-lactate oxidase	NA	NA	NA	NA	NA
WP_002295059.1|1946283_1946754_-	DUF4809 family protein	NA	NA	NA	NA	NA
WP_000202380.1|1947010_1948330_+|transposase	IS1380-like element IS1678 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	82.7	4.8e-210
WP_002302982.1|1948770_1950411_+	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_002302984.1|1950564_1951887_+	2-hydroxycarboxylate transporter family protein	NA	NA	NA	NA	NA
WP_002295053.1|1951948_1952380_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002302985.1|1952443_1953280_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_002295049.1|1953469_1953772_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_002290886.1|1953797_1954229_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_002290885.1|1954225_1954492_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_002290883.1|1954745_1955471_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_002289867.1|1956023_1956776_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_002289868.1|1956791_1957271_+	threonine/serine exporter	NA	NA	NA	NA	NA
WP_002296509.1|1957521_1959102_-	ABC transporter	NA	NA	NA	NA	NA
WP_002287741.1|1959094_1959838_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.9	3.6e-29
WP_002287742.1|1960013_1960790_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002287743.1|1961037_1961874_-	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_002287744.1|1961884_1962814_-	permease	NA	NA	NA	NA	NA
WP_002297218.1|1963422_1964718_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002287746.1|1964954_1965611_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002287747.1|1965836_1967771_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.9	1.1e-58
WP_002321414.1|1967856_1969080_-	glucuronyl hydrolase	NA	NA	NA	NA	NA
WP_002321415.1|1969073_1970972_-	DUF2264 domain-containing protein	NA	NA	NA	NA	NA
WP_002287753.1|1970965_1972084_-	glycosyl hydrolase family 88	NA	NA	NA	NA	NA
WP_002302991.1|1972166_1973000_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002287755.1|1972992_1973910_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002287757.1|1974136_1975261_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002296511.1|1975443_1976352_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287759.1|1976492_1978106_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000222572.1|1978756_1979710_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002289406.1|1979743_1980973_-	GTPase HflX	NA	NA	NA	NA	NA
WP_002289405.1|1980974_1981892_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002289404.1|1981895_1982633_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	40.0	2.3e-12
WP_002289403.1|1982723_1983251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289402.1|1983430_1984024_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.6	8.9e-55
WP_002289401.1|1984127_1984613_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002296291.1|1984765_1984963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289400.1|1985057_1986818_-	multidrug efflux ABC transporter subunit EfrB	NA	W8CYL7	Bacillus_phage	28.6	2.5e-52
WP_002296290.1|1986814_1988545_-	multidrug efflux ABC transporter subunit EfrA	NA	W8CYL7	Bacillus_phage	27.6	2.1e-43
WP_002287947.1|1988937_1989150_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_002287948.1|1989151_1990831_+	ribonuclease J	NA	NA	NA	NA	NA
WP_002294067.1|1991084_1991285_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.2	3.7e-21
WP_002347086.1|1992360_1992759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305550.1|1992751_1993204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044384583.1|1993190_1993598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_127836239.1|1993576_1993879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|1993914_1994286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296902.1|1994287_1994689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286474.1|1994702_1995110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087046766.1|1996032_1997195_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286484.1|1998134_1999160_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	61.3	2.1e-64
WP_002286683.1|1999156_1999381_-|holin	holin	holin	NA	NA	NA	NA
>prophage 10
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	2002564	2040187	2796178	protease,capsid,portal,terminase,tRNA,head,tail	Enterococcus_phage(28.57%)	46	NA	NA
WP_162225025.1|2002564_2004856_-	hypothetical protein	NA	A0A1D3SNL1	Enterococcus_phage	30.0	3.9e-90
WP_002286500.1|2004865_2005603_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_162225026.1|2005653_2009073_-|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	41.5	8.7e-78
WP_002305377.1|2009089_2009272_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286510.1|2009274_2009637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162225027.1|2009656_2010262_-|tail	phage tail protein	tail	Q8W5Z9	Listeria_phage	41.1	4.4e-33
WP_002286516.1|2010273_2010678_-	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002296598.1|2010670_2011072_-	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	33.3	1.1e-13
WP_002286522.1|2011061_2011415_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_002286523.1|2011404_2011716_-	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	42.1	6.3e-12
WP_156265003.1|2011712_2012546_-	hypothetical protein	NA	D2IYX3	Enterococcus_phage	71.1	8.5e-120
WP_002286525.1|2012555_2013716_-|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.1	1.8e-99
WP_002286527.1|2013715_2014402_-|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_002286530.1|2014364_2015543_-|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286533.1|2015562_2017257_-|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286538.1|2017234_2017549_-|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002296599.1|2017651_2017933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045135985.1|2017937_2018282_-	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	58.1	1.0e-26
WP_045135986.1|2018511_2018886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303286.1|2019231_2019645_-	autolysin	NA	C9E2P5	Enterococcus_phage	81.0	5.6e-56
WP_002303285.1|2019721_2020018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303283.1|2020014_2020218_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303282.1|2020224_2020455_-	hypothetical protein	NA	A0A0S2MYD2	Enterococcus_phage	52.1	1.6e-12
WP_002303281.1|2020451_2020835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303280.1|2020831_2021374_-	DUF1642 domain-containing protein	NA	Q8W5X2	Listeria_phage	40.7	3.9e-17
WP_002303279.1|2021370_2021841_-	hypothetical protein	NA	A0A0A7RWK2	Clostridium_phage	33.8	9.6e-12
WP_002305847.1|2021842_2022025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002317474.1|2022017_2022335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299339.1|2022331_2023183_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.2	2.3e-27
WP_085837494.1|2023197_2023998_-	replication protein	NA	B4XYS6	Lactobacillus_phage	54.9	2.3e-58
WP_162225019.1|2024040_2024931_-	recombinase RecT	NA	D2IYT9	Enterococcus_phage	84.1	1.8e-136
WP_085837496.1|2024932_2025874_-	endonuclease	NA	D2IZK1	Enterococcus_phage	78.9	2.0e-146
WP_002303273.1|2026106_2026442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299325.1|2026708_2026933_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	81.1	2.2e-27
WP_002299038.1|2027241_2027397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304464.1|2027468_2027699_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	49.3	4.4e-10
WP_002303266.1|2027866_2028133_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JP54	Staphylococcus_phage	52.7	5.4e-12
WP_002303265.1|2028332_2029037_+	LexA family transcriptional regulator	NA	D7RWF2	Brochothrix_phage	42.4	6.2e-39
WP_002303264.1|2029123_2030413_+	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	74.0	5.6e-46
WP_002303263.1|2030478_2031831_+	recombinase family protein	NA	D2IZV7	Enterococcus_phage	55.3	1.7e-133
WP_002304462.1|2031725_2032397_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_002287951.1|2032451_2033105_-	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002294071.1|2033094_2034408_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_002287953.1|2034717_2037363_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.9	4.0e-163
WP_002287954.1|2037755_2038403_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002287955.1|2038975_2040187_-|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
>prophage 11
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	2052608	2125310	2796178	transposase,tRNA	Streptococcus_phage(17.65%)	61	NA	NA
WP_086956687.1|2052608_2053770_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002287172.1|2059944_2060307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287231.1|2060380_2060761_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002296072.1|2060842_2062018_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002287167.1|2062094_2062679_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	43.4	2.0e-27
WP_002297404.1|2063087_2064338_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002287165.1|2064662_2065661_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	54.1	2.6e-30
WP_002287163.1|2065772_2066282_+	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	56.1	1.5e-39
WP_002287161.1|2066311_2066971_-	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_002287159.1|2066972_2067737_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_002287156.1|2067744_2068422_-	YutD family protein	NA	NA	NA	NA	NA
WP_002287155.1|2068458_2069844_-	multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase	NA	NA	NA	NA	NA
WP_002287154.1|2070160_2070676_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_002305494.1|2070782_2071640_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287147.1|2071720_2072056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287145.1|2072122_2073493_-	NOL1/NOP2/sun family putative RNA methylase	NA	NA	NA	NA	NA
WP_002287143.1|2073570_2074107_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287140.1|2074415_2075897_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297185.1|2076061_2077357_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	3.8e-10
WP_002287139.1|2077521_2078229_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_002287137.1|2078307_2078646_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002287135.1|2078756_2079719_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_002287134.1|2079733_2081065_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_002287133.1|2081072_2081753_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_002287132.1|2081971_2082451_-|tRNA	aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
WP_002287130.1|2082577_2084257_-	ribonuclease J	NA	NA	NA	NA	NA
WP_002287129.1|2084804_2086307_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002287128.1|2086319_2086982_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	2.5e-21
WP_002287127.1|2087082_2087286_-	CsbD family protein	NA	NA	NA	NA	NA
WP_002287126.1|2087396_2088581_-	beta-aspartyl-peptidase	NA	NA	NA	NA	NA
WP_002294022.1|2088737_2090477_-	putative basic amino acid antiporter YfcC	NA	NA	NA	NA	NA
WP_002287124.1|2091249_2091864_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002294021.1|2092469_2092847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287122.1|2093146_2094028_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.3	1.3e-73
WP_002287121.1|2094070_2095090_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002303350.1|2095714_2096674_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287119.1|2096788_2097793_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002287118.1|2097805_2098855_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002287116.1|2098871_2099693_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002287115.1|2099679_2100459_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002287114.1|2100475_2100946_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002287112.1|2100957_2101377_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002302892.1|2101457_2104226_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002294014.1|2104425_2104650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002294013.1|2105428_2107144_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	1.7e-50
WP_002289511.1|2107146_2108910_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	1.5e-44
WP_002289509.1|2108949_2109486_-	folate family ECF transporter S component	NA	NA	NA	NA	NA
WP_002289508.1|2109808_2110231_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_162225028.1|2110439_2111549_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	32.6	1.7e-19
WP_002294011.1|2111672_2112302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294004.1|2112752_2113637_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_002305490.1|2113629_2114199_-	ribonuclease M5	NA	NA	NA	NA	NA
WP_002294001.1|2114191_2114968_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_002287525.1|2115548_2116697_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|2116713_2117118_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002293998.1|2118510_2119098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289325.1|2119576_2121586_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.3	1.4e-96
WP_002289337.1|2121853_2122132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289327.1|2122228_2123050_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	32.8	2.7e-25
WP_002289328.1|2123334_2124345_-	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	40.8	2.8e-56
WP_002289330.1|2124356_2125310_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.2	3.0e-20
>prophage 12
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	2284014	2331710	2796178	protease,capsid,transposase,portal,integrase,bacteriocin,terminase,holin,head,tail	Enterococcus_phage(26.47%)	60	2282127:2282186	2319896:2319956
2282127:2282186	attL	ACTCTTAATCAGCGGGTCGCGGGTTCGAGCCCCTCACGGCCCATTGGGTGCCAAACCCAC	NA	NA	NA	NA
WP_002336351.1|2284014_2284572_+	GNAT family N-acetyltransferase	NA	A0A0B5CYP1	Listeria_phage	41.5	7.1e-30
WP_156264869.1|2284617_2285637_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.7	2.2e-61
WP_142647768.1|2285647_2285845_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	81.2	5.6e-22
WP_002322123.1|2285860_2286103_-|holin	holin	holin	D2J075	Enterococcus_phage	68.4	2.1e-23
WP_162225029.1|2286159_2288280_-	hypothetical protein	NA	A0A249XZH9	Enterococcus_phage	48.1	3.0e-81
WP_162225030.1|2288303_2290595_-	hypothetical protein	NA	A0A1D3SNL1	Enterococcus_phage	29.8	3.0e-90
WP_047927935.1|2290604_2291342_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_162225031.1|2291391_2294811_-|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	41.5	8.7e-78
WP_002305377.1|2294827_2295010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286510.1|2295012_2295375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162225032.1|2295394_2296003_-|tail	phage tail protein	tail	Q8W5Z9	Listeria_phage	41.1	1.2e-33
WP_002319774.1|2296014_2296419_-	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002318246.1|2296411_2296813_-	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	34.1	3.0e-14
WP_002286522.1|2296802_2297156_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_002318248.1|2297145_2297457_-	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	43.5	1.1e-11
WP_156265005.1|2297453_2298329_-	hypothetical protein	NA	D2IYX3	Enterococcus_phage	73.9	7.3e-130
WP_002336343.1|2298338_2299499_-|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.4	9.4e-101
WP_002336342.1|2299498_2300185_-|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.8e-30
WP_002342547.1|2300147_2301326_-|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	3.2e-80
WP_162225033.1|2301345_2303040_-|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.8	1.4e-148
WP_002286538.1|2303017_2303332_-|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002296599.1|2303434_2303716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045135985.1|2303720_2304065_-	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	58.1	1.0e-26
WP_002318889.1|2304315_2305023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264893.1|2305677_2306031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002318885.1|2306403_2306820_-	autolysin	NA	C9E2P5	Enterococcus_phage	68.1	4.8e-47
WP_156264895.1|2306949_2307144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264897.1|2307140_2307338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264899.1|2307334_2307910_-	DUF1642 domain-containing protein	NA	A0A0E3T929	Enterococcus_phage	48.4	5.6e-38
WP_156264901.1|2307906_2308275_-	hypothetical protein	NA	A0A141E176	Streptococcus_phage	51.1	2.0e-28
WP_156264903.1|2308438_2308621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264905.1|2308617_2308935_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	36.4	1.0e-09
WP_156264907.1|2308886_2309240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264909.1|2309236_2309398_-	antitoxin	NA	NA	NA	NA	NA
WP_002329414.1|2309394_2309712_-	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	61.0	7.6e-29
WP_156264911.1|2310023_2312360_-	DNA primase	NA	Q9T0Y1	Lactobacillus_phage	51.0	2.2e-226
WP_156264913.1|2312359_2312872_-	DUF669 domain-containing protein	NA	A8ATF2	Listeria_phage	44.6	5.7e-34
WP_156264915.1|2312889_2314413_-	DEAD/DEAH box helicase family protein	NA	Q9T0Y3	Lactobacillus_phage	47.6	6.8e-107
WP_010721532.1|2314384_2315095_-	AAA family ATPase	NA	A8YQL5	Lactobacillus_phage	66.1	3.7e-84
WP_156264917.1|2315107_2315587_-	hypothetical protein	NA	E5DV79	Deep-sea_thermophilic_phage	46.5	2.9e-32
WP_002350675.1|2315519_2315837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156264919.1|2316048_2316300_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002323901.1|2316313_2316505_-	hypothetical protein	NA	Q9T1I7	Lactobacillus_phage	35.5	1.4e-06
WP_002323900.1|2316798_2317119_+	helix-turn-helix transcriptional regulator	NA	A0A182BQC8	Lactococcus_phage	48.2	2.7e-18
WP_156264921.1|2317136_2317559_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_156264923.1|2317642_2318131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010729099.1|2318154_2318445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156264925.1|2318552_2319764_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0B5CTW8	Listeria_phage	30.8	3.8e-36
WP_002294609.1|2320433_2320820_-	DUF4064 domain-containing protein	NA	NA	NA	NA	NA
2319896:2319956	attR	ACTCTTAATCAGCGGGTCGCGGGTTCGAGCCCCTCACGGCCCATTGGGTGCCAAACCCACG	NA	NA	NA	NA
WP_002294608.1|2320816_2321338_-	RDD family protein	NA	NA	NA	NA	NA
WP_002294607.1|2321339_2322374_-	signal peptide peptidase SppA	NA	A0A1C9LW82	Vibrio_phage	29.2	6.6e-13
WP_002348772.1|2322406_2323822_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_002303464.1|2323790_2325944_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	27.8	7.0e-41
WP_002303465.1|2326201_2326438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002294603.1|2326456_2326672_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002294602.1|2327374_2328127_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002348775.1|2328141_2329389_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_002294600.1|2329464_2329611_-|bacteriocin	EntF family bacteriocin induction factor	bacteriocin	NA	NA	NA	NA
WP_000202380.1|2329859_2331179_+|transposase	IS1380-like element IS1678 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	82.7	4.8e-210
WP_002305452.1|2331398_2331710_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 13
NZ_CP038996	Enterococcus faecium strain SRR24 chromosome, complete genome	2796178	2663705	2680601	2796178		Streptococcus_phage(92.86%)	18	NA	NA
WP_002297366.1|2663705_2664020_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.4	1.0e-25
WP_002297365.1|2664032_2664407_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	66.1	2.4e-34
WP_002297364.1|2664416_2664752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321809.1|2664834_2666175_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	65.4	2.4e-164
WP_002297358.1|2666252_2666927_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002321810.1|2667159_2667594_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SDW2	Streptococcus_phage	77.1	6.5e-63
WP_002297356.1|2667594_2668302_+	DNA methylase	NA	A0A1S5SEK0	Streptococcus_phage	50.4	5.8e-53
WP_002297354.1|2668291_2668582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297353.1|2668840_2670025_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	61.6	2.9e-142
WP_002297352.1|2670039_2670159_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002286940.1|2670904_2672815_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_033658092.1|2672918_2673143_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.8	1.2e-23
WP_002297350.1|2673155_2673659_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	59.9	9.2e-53
WP_002297349.1|2673718_2674108_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	68.3	3.9e-43
WP_002297348.1|2674094_2676542_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_002297347.1|2676546_2678670_+	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	59.7	1.2e-181
WP_002297346.1|2678666_2679671_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	63.5	5.6e-118
WP_002297345.1|2679689_2680601_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	44.0	2.2e-65
>prophage 1
NZ_CP038997	Enterococcus faecium strain SRR24 plasmid pSRR24	123020	19379	56221	123020	transposase,protease	Streptococcus_phage(36.36%)	39	NA	NA
WP_002287525.1|19379_20528_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|20544_20949_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002350568.1|22307_22562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016922247.1|22751_22967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016922248.1|23018_23933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002350571.1|23932_24832_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_002350572.1|24831_25419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042957131.1|25653_26082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138821081.1|26186_26381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016922335.1|26453_27356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002350576.1|27372_27849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016922336.1|27864_28464_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_152630967.1|29022_29451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287525.1|29624_30773_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|30789_31194_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002320853.1|31411_32041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320854.1|32037_33414_-	cell division protein FtsK	NA	G1FGP1	Mycobacterium_phage	42.2	3.8e-48
WP_002320855.1|33493_34756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320856.1|34768_35116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729859.1|35135_36005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320858.1|36236_37043_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010730977.1|37130_37931_-	hypothetical protein	NA	U5PTP5	Bacillus_phage	36.3	9.3e-07
WP_002350582.1|38269_39379_-	class C sortase	NA	NA	NA	NA	NA
WP_010730978.1|39368_40226_-	class C sortase	NA	NA	NA	NA	NA
WP_002350584.1|40300_42136_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_016922338.1|42184_44575_-	Cys-Gln thioester bond-forming surface protein	NA	NA	NA	NA	NA
WP_002350491.1|44844_46092_-	C39 family peptidase	NA	NA	NA	NA	NA
WP_002350493.1|46483_46900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010782614.1|46916_47654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305737.1|47946_49119_+|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.7e-121
WP_016922277.1|49408_49972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002350496.1|49958_50486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002350497.1|50508_51846_-	CHAP domain-containing protein	NA	Q859L3	Staphylococcus_phage	54.0	8.5e-37
WP_016922278.1|51965_52445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287525.1|52601_53750_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|53766_54171_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_044382017.1|54451_54685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347440.1|54687_55005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013646119.1|55540_56221_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	5.8e-127
>prophage 2
NZ_CP038997	Enterococcus faecium strain SRR24 plasmid pSRR24	123020	61701	106857	123020	transposase,protease	Streptococcus_phage(38.46%)	49	NA	NA
WP_013646119.1|61701_62382_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	5.8e-127
WP_002350503.1|62450_63248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138821078.1|63385_65626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321022.1|65862_66123_-	hypothetical protein	NA	A0A059T7S7	Listeria_phage	45.3	5.3e-12
WP_002321023.1|66251_66782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321024.1|66797_67163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321025.1|67168_67912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010733700.1|68042_68765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321027.1|68770_69016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321028.1|69026_69611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162225035.1|69732_70428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287522.1|70513_70918_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002287525.1|70934_72083_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_044382644.1|73320_74229_-|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_000195429.1|74523_75696_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_002320763.1|75871_76207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320764.1|76380_76875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320765.1|76871_77099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320766.1|77264_79235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320767.1|79249_80116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320768.1|80105_80339_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_156264962.1|80350_82507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347431.1|82857_83196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729680.1|83595_87237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729681.1|87239_89189_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2I7REQ1	Vibrio_phage	24.7	2.3e-30
WP_010729682.1|89230_90289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320776.1|90407_90863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729683.1|91447_92251_-	replication initiation protein	NA	NA	NA	NA	NA
WP_000195429.1|92774_93947_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_044383777.1|94563_95787_+	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
WP_010729833.1|95821_96589_+	replication initiation protein	NA	NA	NA	NA	NA
WP_002320781.1|96780_97179_+	antitoxin HicB	NA	NA	NA	NA	NA
WP_002287522.1|97398_97803_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002287525.1|97819_98968_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_025478686.1|99376_99772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002350538.1|99772_100150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320784.1|100139_100535_-	antitoxin HicB	NA	A0A0C5AN56	Paenibacillus_phage	39.7	4.1e-16
WP_002320785.1|100601_100787_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0A7RWW9	Clostridium_phage	40.4	7.6e-05
WP_002347534.1|100868_101123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347535.1|101144_101381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347536.1|101396_101681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347537.1|101783_101966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001015311.1|102198_102879_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_152630965.1|102906_103482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729835.1|103594_103861_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	48.8	8.6e-18
WP_010729836.1|103862_104084_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_002360989.1|104309_105128_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002320793.1|105131_105428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071879978.1|105552_106857_+|transposase	transposase	transposase	NA	NA	NA	NA
