assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009732815.1_ASM973281v1	NZ_CP045869	Klebsiella aerogenes strain Y3 chromosome, complete genome	1	900137-900211	1	CRISPRCasFinder	no		DEDDh,WYL,cas3,DinG,cas14j,csa3	Orphan	CGGGTAAGGCGTTAGCCGCCACCCG	25	1	1	900162-900186	NZ_CP045869.1_3493305-3493329	NA	1	1	Orphan	DEDDh,WYL,cas3,DinG,cas14j,csa3	NA,NA	NA|314aa|up_9|NZ_CP045869.1_885583_886525_-	PRK10226, PRK10226, isoaspartyl peptidase; Provisional	NA|412aa|up_8|NZ_CP045869.1_886704_887940_+	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|252aa|up_7|NZ_CP045869.1_887939_888695_+	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|300aa|up_6|NZ_CP045869.1_888850_889750_+	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|811aa|up_5|NZ_CP045869.1_889753_892186_+	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family	NA|272aa|up_4|NZ_CP045869.1_892336_893152_+	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily	NA|422aa|up_3|NZ_CP045869.1_893291_894557_+	pfam07350, DUF1479, Protein of unknown function (DUF1479)	NA|358aa|up_2|NZ_CP045869.1_894553_895627_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|434aa|up_1|NZ_CP045869.1_895923_897225_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|788aa|up_0|NZ_CP045869.1_897240_899604_+	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|531aa|down_0|NZ_CP045869.1_900226_901819_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|261aa|down_1|NZ_CP045869.1_901998_902781_+	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|305aa|down_2|NZ_CP045869.1_902979_903894_+	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|239aa|down_3|NZ_CP045869.1_903985_904702_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|459aa|down_4|NZ_CP045869.1_904762_906139_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|347aa|down_5|NZ_CP045869.1_906294_907335_-	cd19091, AKR_PsAKR, Polaromonas Sp	NA|371aa|down_6|NZ_CP045869.1_907442_908555_-	cd01117, YbiR_permease, Putative anion permease YbiR	NA|156aa|down_7|NZ_CP045869.1_908551_909019_-	PRK11050, PRK11050, manganese-binding transcriptional regulator MntR	NA|42aa|down_8|NZ_CP045869.1_909205_909331_+	NF033226, small_MntS, manganase accumulation protein MntS	NA|526aa|down_9|NZ_CP045869.1_909599_911177_+	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
GCF_009732815.1_ASM973281v1	NZ_CP045869	Klebsiella aerogenes strain Y3 chromosome, complete genome	2	1834012-1834130	2	CRISPRCasFinder	no		DEDDh,WYL,cas3,DinG,cas14j,csa3	Orphan	TCCCGGGGGACGGCGCTTCGCGCCTTACCC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,DinG,cas14j,csa3	NA,NA	NA|764aa|up_9|NZ_CP045869.1_1822944_1825236_+	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase	NA|272aa|up_8|NZ_CP045869.1_1825263_1826079_-	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|178aa|up_7|NZ_CP045869.1_1826111_1826645_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|288aa|up_6|NZ_CP045869.1_1826738_1827602_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|200aa|up_5|NZ_CP045869.1_1827598_1828198_-	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed	NA|291aa|up_4|NZ_CP045869.1_1828184_1829057_-	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase	NA|496aa|up_3|NZ_CP045869.1_1829066_1830554_-	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|131aa|up_2|NZ_CP045869.1_1830741_1831134_-	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|480aa|up_1|NZ_CP045869.1_1831144_1832584_-	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics	NA|407aa|up_0|NZ_CP045869.1_1832784_1834005_+	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase	NA|534aa|down_0|NZ_CP045869.1_1835152_1836754_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|535aa|down_1|NZ_CP045869.1_1836769_1838374_-	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|307aa|down_2|NZ_CP045869.1_1838388_1839309_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|275aa|down_3|NZ_CP045869.1_1839460_1840285_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|316aa|down_4|NZ_CP045869.1_1840595_1841543_+	PRK13970, PRK13970, 4-hydroxyproline epimerase	NA|370aa|down_5|NZ_CP045869.1_1841539_1842649_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|88aa|down_6|NZ_CP045869.1_1842645_1842909_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|421aa|down_7|NZ_CP045869.1_1842889_1844152_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|211aa|down_8|NZ_CP045869.1_1844883_1845516_+	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional	NA|255aa|down_9|NZ_CP045869.1_1845512_1846277_+	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional
GCF_009732815.1_ASM973281v1	NZ_CP045869	Klebsiella aerogenes strain Y3 chromosome, complete genome	3	2148758-2148886	3	CRISPRCasFinder	no		DEDDh,WYL,cas3,DinG,cas14j,csa3	Orphan	TTCCCGGGTCGCGGCGTTCCGCCTTACCCGGCCTACAG	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,DinG,cas14j,csa3	NA|42aa|up_2|NZ_CP045869.1_2147387_2147513_-,NA|62aa|down_6|NZ_CP045869.1_2156453_2156639_+	NA|189aa|up_9|NZ_CP045869.1_2138191_2138758_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|816aa|up_8|NZ_CP045869.1_2139408_2141856_+	PRK10049, pgaA, outer membrane protein PgaA; Provisional	NA|672aa|up_7|NZ_CP045869.1_2141864_2143880_+	PRK14582, pgaB, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA|444aa|up_6|NZ_CP045869.1_2143872_2145204_+	PRK11204, PRK11204, N-glycosyltransferase; Provisional	NA|145aa|up_5|NZ_CP045869.1_2145200_2145635_+	PRK14584, hmsS, hemin storage system protein; Provisional	NA|264aa|up_4|NZ_CP045869.1_2145692_2146484_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|228aa|up_3|NZ_CP045869.1_2146703_2147387_+	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family	NA|42aa|up_2|NZ_CP045869.1_2147387_2147513_-	NA	NA|306aa|up_1|NZ_CP045869.1_2147528_2148446_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|up_0|NZ_CP045869.1_2148445_2148751_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|124aa|down_0|NZ_CP045869.1_2148943_2149315_-	pfam10784, Plasmid_stab_B, Plasmid stability protein	NA|319aa|down_1|NZ_CP045869.1_2149324_2150281_-	pfam06406, StbA, StbA protein	NA|468aa|down_2|NZ_CP045869.1_2150555_2151959_-	PRK10429, PRK10429, melibiose:sodium transporter MelB	NA|451aa|down_3|NZ_CP045869.1_2152063_2153416_-	PRK15076, PRK15076, alpha-galactosidase; Provisional	NA|314aa|down_4|NZ_CP045869.1_2153652_2154594_+	PRK10371, PRK10371, transcriptional regulator MelR	NA|501aa|down_5|NZ_CP045869.1_2154644_2156147_-	PRK10642, PRK10642, proline/glycine betaine transporter ProP	NA|62aa|down_6|NZ_CP045869.1_2156453_2156639_+	NA	NA|112aa|down_7|NZ_CP045869.1_2156681_2157017_+	PRK10220, PRK10220, phnA family protein	NA|145aa|down_8|NZ_CP045869.1_2157301_2157736_+	PRK10148, PRK10148, VOC family metalloprotein YjdN	NA|155aa|down_9|NZ_CP045869.1_2158951_2159416_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_009732815.1_ASM973281v1	NZ_CP045869	Klebsiella aerogenes strain Y3 chromosome, complete genome	4	3369341-3369455	4	CRISPRCasFinder	no		DEDDh,WYL,cas3,DinG,cas14j,csa3	Orphan	GCGGCTACGCCTTATCCGGGCTACCCAAC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,DinG,cas14j,csa3	NA,NA|120aa|down_3|NZ_CP045869.1_3372644_3373004_-	NA|199aa|up_9|NZ_CP045869.1_3357819_3358416_-	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional	NA|110aa|up_8|NZ_CP045869.1_3358740_3359070_-	PRK10972, PRK10972, cell division protein ZapA	NA|193aa|up_7|NZ_CP045869.1_3359236_3359815_+	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|439aa|up_6|NZ_CP045869.1_3359840_3361157_+	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|393aa|up_5|NZ_CP045869.1_3361153_3362332_+	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|401aa|up_4|NZ_CP045869.1_3362342_3363545_+	PRK08013, PRK08013, oxidoreductase; Provisional	NA|365aa|up_3|NZ_CP045869.1_3363967_3365062_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|130aa|up_2|NZ_CP045869.1_3365086_3365476_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|958aa|up_1|NZ_CP045869.1_3365606_3368480_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|248aa|up_0|NZ_CP045869.1_3368540_3369284_+	PRK09730, PRK09730, SDR family oxidoreductase	NA|168aa|down_0|NZ_CP045869.1_3369479_3369983_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|204aa|down_1|NZ_CP045869.1_3369972_3370584_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|670aa|down_2|NZ_CP045869.1_3370585_3372595_-	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|120aa|down_3|NZ_CP045869.1_3372644_3373004_-	NA	NA|478aa|down_4|NZ_CP045869.1_3373128_3374562_-	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional	NA|243aa|down_5|NZ_CP045869.1_3374681_3375410_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|104aa|down_6|NZ_CP045869.1_3375460_3375772_+	PRK04980, PRK04980, hypothetical protein; Provisional	NA|220aa|down_7|NZ_CP045869.1_3375936_3376596_+	PRK15087, PRK15087, hemolysin; Provisional	NA|328aa|down_8|NZ_CP045869.1_3376694_3377678_-	PRK09559, PRK09559, putative global regulator; Reviewed	NA|89aa|down_9|NZ_CP045869.1_3377901_3378168_+	PRK10878, PRK10878, FAD assembly factor SdhE
