assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009730455.1_ASM973045v1	NZ_CP046331	Cupriavidus metallidurans strain FDAARGOS_675 chromosome, complete genome	1	2984554-2984711	1	CRISPRCasFinder	no		PD-DExK,DinG,csa3,RT,WYL,cas3,DEDDh	Orphan	GCCGCCCTTAGCTCAGTTGGATAGAGCACTCGCCTTCTAAGCGAGCGGTCA	51	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DinG,csa3,RT,WYL,cas3,DEDDh	NA,NA|1127aa|down_1|NZ_CP046331.1_2986287_2989668_+,NA|223aa|down_2|NZ_CP046331.1_2989667_2990336_+,NA|216aa|down_3|NZ_CP046331.1_2990625_2991273_+,NA|291aa|down_6|NZ_CP046331.1_2993976_2994849_-	NA|263aa|up_9|NZ_CP046331.1_2972206_2972995_+	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB	NA|235aa|up_8|NZ_CP046331.1_2973065_2973770_+	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|236aa|up_7|NZ_CP046331.1_2973806_2974514_+	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB	NA|451aa|up_6|NZ_CP046331.1_2974637_2975990_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|707aa|up_5|NZ_CP046331.1_2976078_2978199_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|511aa|up_4|NZ_CP046331.1_2978309_2979842_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|284aa|up_3|NZ_CP046331.1_2979964_2980816_-	COG3176, COG3176, Putative hemolysin [General function prediction only]	NA|159aa|up_2|NZ_CP046331.1_2981062_2981539_-	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]	NA|74aa|up_1|NZ_CP046331.1_2981701_2981923_-	PRK12442, PRK12442, translation initiation factor IF-1; Reviewed	NA|417aa|up_0|NZ_CP046331.1_2983229_2984480_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|465aa|down_0|NZ_CP046331.1_2984889_2986284_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|1127aa|down_1|NZ_CP046331.1_2986287_2989668_+	NA	NA|223aa|down_2|NZ_CP046331.1_2989667_2990336_+	NA	NA|216aa|down_3|NZ_CP046331.1_2990625_2991273_+	NA	NA|249aa|down_4|NZ_CP046331.1_2991974_2992721_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|420aa|down_5|NZ_CP046331.1_2992720_2993980_-	COG0603, COG0603, Predicted PP-loop superfamily ATPase [General function prediction only]	NA|291aa|down_6|NZ_CP046331.1_2993976_2994849_-	NA	NA|623aa|down_7|NZ_CP046331.1_2994848_2996717_-	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only]	NA|711aa|down_8|NZ_CP046331.1_2996833_2998966_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|440aa|down_9|NZ_CP046331.1_2999587_3000907_+	pfam14280, DUF4365, Domain of unknown function (DUF4365)
GCF_009730455.1_ASM973045v1	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	1	588716-588798	1	CRISPRCasFinder	no	DEDDh	DEDDh,WYL,csa3,cas3	Unclear	GTGCGGAATTCGTAGCCATACTTGTC	26	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DinG,csa3,RT,WYL,cas3,DEDDh	NA|94aa|up_0|NZ_CP046333.1_588010_588292_-,NA	NA|439aa|up_9|NZ_CP046333.1_577774_579091_-	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|438aa|up_8|NZ_CP046333.1_579130_580444_-	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|329aa|up_7|NZ_CP046333.1_580471_581458_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|704aa|up_6|NZ_CP046333.1_581500_583612_-	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|269aa|up_5|NZ_CP046333.1_583694_584501_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|226aa|up_4|NZ_CP046333.1_584665_585343_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|333aa|up_3|NZ_CP046333.1_585457_586456_+	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|225aa|up_2|NZ_CP046333.1_586642_587317_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|209aa|up_1|NZ_CP046333.1_587344_587971_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|94aa|up_0|NZ_CP046333.1_588010_588292_-	NA	NA|754aa|down_0|NZ_CP046333.1_589224_591486_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|393aa|down_1|NZ_CP046333.1_591860_593039_+	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription]	NA|513aa|down_2|NZ_CP046333.1_593060_594599_-	PRK11767, PRK11767, SpoVR family protein; Provisional	NA|424aa|down_3|NZ_CP046333.1_594636_595908_-	pfam04285, DUF444, Protein of unknown function (DUF444)	NA|641aa|down_4|NZ_CP046333.1_596004_597927_-	PRK15455, PRK15455, PrkA family serine protein kinase; Provisional	NA|305aa|down_5|NZ_CP046333.1_598804_599719_-	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs	NA|301aa|down_6|NZ_CP046333.1_599855_600758_+	cd08421, PBP2_LTTR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|342aa|down_7|NZ_CP046333.1_600780_601806_-	cd13576, PBP2_BugD_Asp, Aspartic acid transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold	NA|390aa|down_8|NZ_CP046333.1_602088_603258_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|460aa|down_9|NZ_CP046333.1_603266_604646_+	pfam03972, MmgE_PrpD, MmgE/PrpD family
