assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009730435.1_ASM973043v1	NZ_CP046320	Gordonia bronchialis strain FDAARGOS_676 chromosome, complete genome	1	704442-704577	1	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas4,DinG,cas3	Orphan	GTCGCGGCTCAACCAGCGGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,WYL,cas4,DinG,cas3	NA|54aa|up_4|NZ_CP046320.1_696180_696342_+,NA|33aa|down_4|NZ_CP046320.1_707319_707418_+	NA|180aa|up_9|NZ_CP046320.1_689864_690404_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|517aa|up_8|NZ_CP046320.1_690628_692179_+	cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like	NA|123aa|up_7|NZ_CP046320.1_692217_692586_+	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|173aa|up_6|NZ_CP046320.1_692629_693148_+	cd02225, cupin_PA3510-like, Pseudomonas aeruginosa PA3510 and related proteins, cupin domain	NA|242aa|up_5|NZ_CP046320.1_695347_696073_-	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway	NA|54aa|up_4|NZ_CP046320.1_696180_696342_+	NA	NA|851aa|up_3|NZ_CP046320.1_697784_700337_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|546aa|up_2|NZ_CP046320.1_700922_702560_-	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|228aa|up_1|NZ_CP046320.1_702603_703287_-	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK	NA|277aa|up_0|NZ_CP046320.1_703395_704226_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|197aa|down_0|NZ_CP046320.1_704637_705228_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|136aa|down_1|NZ_CP046320.1_705262_705670_+	TIGR02246, hypothetical_protein, conserved hypothetical protein	NA|250aa|down_2|NZ_CP046320.1_705736_706486_+	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|140aa|down_3|NZ_CP046320.1_706482_706902_+	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|33aa|down_4|NZ_CP046320.1_707319_707418_+	NA	NA|605aa|down_5|NZ_CP046320.1_707422_709237_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|720aa|down_6|NZ_CP046320.1_709233_711393_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|211aa|down_7|NZ_CP046320.1_711400_712033_+	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|846aa|down_8|NZ_CP046320.1_712069_714607_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|232aa|down_9|NZ_CP046320.1_714606_715302_+	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional
GCF_009730435.1_ASM973043v1	NZ_CP046320	Gordonia bronchialis strain FDAARGOS_676 chromosome, complete genome	2	4515696-4515890	2	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas4,DinG,cas3	Orphan	AGAGGCGAACGTAGCCAACAGTGT	24	0	0	NA	NA	NA	3	3	Orphan	DEDDh,csa3,WYL,cas4,DinG,cas3	NA|186aa|up_7|NZ_CP046320.1_4507844_4508402_+,NA|115aa|up_5|NZ_CP046320.1_4508779_4509124_-,NA|166aa|down_0|NZ_CP046320.1_4516698_4517196_+,NA|562aa|down_1|NZ_CP046320.1_4517195_4518881_+,NA|160aa|down_2|NZ_CP046320.1_4518852_4519332_+,NA|71aa|down_3|NZ_CP046320.1_4519340_4519553_+,NA|93aa|down_8|NZ_CP046320.1_4522869_4523148_-,NA|56aa|down_9|NZ_CP046320.1_4523255_4523423_+	NA|68aa|up_9|NZ_CP046320.1_4504980_4505184_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|776aa|up_8|NZ_CP046320.1_4505524_4507852_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|186aa|up_7|NZ_CP046320.1_4507844_4508402_+	NA	NA|124aa|up_6|NZ_CP046320.1_4508411_4508783_-	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|115aa|up_5|NZ_CP046320.1_4508779_4509124_-	NA	NA|578aa|up_4|NZ_CP046320.1_4509347_4511081_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|132aa|up_3|NZ_CP046320.1_4512205_4512601_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|67aa|up_2|NZ_CP046320.1_4512794_4512995_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|747aa|up_1|NZ_CP046320.1_4513073_4515314_+	COG3378, COG3378, Phage associated DNA primase [General function prediction only]	NA|77aa|up_0|NZ_CP046320.1_4515315_4515546_+	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|166aa|down_0|NZ_CP046320.1_4516698_4517196_+	NA	NA|562aa|down_1|NZ_CP046320.1_4517195_4518881_+	NA	NA|160aa|down_2|NZ_CP046320.1_4518852_4519332_+	NA	NA|71aa|down_3|NZ_CP046320.1_4519340_4519553_+	NA	NA|151aa|down_4|NZ_CP046320.1_4519584_4520037_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|303aa|down_5|NZ_CP046320.1_4520095_4521004_-	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|421aa|down_6|NZ_CP046320.1_4521135_4522398_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|151aa|down_7|NZ_CP046320.1_4522410_4522863_-	cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion	NA|93aa|down_8|NZ_CP046320.1_4522869_4523148_-	NA	NA|56aa|down_9|NZ_CP046320.1_4523255_4523423_+	NA
GCF_009730435.1_ASM973043v1	NZ_CP046320	Gordonia bronchialis strain FDAARGOS_676 chromosome, complete genome	3	4515962-4516105	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas4,DinG,cas3	Orphan	AGAGGCGAACGTAGCCAACAGTGT	24	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,WYL,cas4,DinG,cas3	NA|186aa|up_7|NZ_CP046320.1_4507844_4508402_+,NA|115aa|up_5|NZ_CP046320.1_4508779_4509124_-,NA|166aa|down_0|NZ_CP046320.1_4516698_4517196_+,NA|562aa|down_1|NZ_CP046320.1_4517195_4518881_+,NA|160aa|down_2|NZ_CP046320.1_4518852_4519332_+,NA|71aa|down_3|NZ_CP046320.1_4519340_4519553_+,NA|93aa|down_8|NZ_CP046320.1_4522869_4523148_-,NA|56aa|down_9|NZ_CP046320.1_4523255_4523423_+	NA|68aa|up_9|NZ_CP046320.1_4504980_4505184_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|776aa|up_8|NZ_CP046320.1_4505524_4507852_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|186aa|up_7|NZ_CP046320.1_4507844_4508402_+	NA	NA|124aa|up_6|NZ_CP046320.1_4508411_4508783_-	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|115aa|up_5|NZ_CP046320.1_4508779_4509124_-	NA	NA|578aa|up_4|NZ_CP046320.1_4509347_4511081_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|132aa|up_3|NZ_CP046320.1_4512205_4512601_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|67aa|up_2|NZ_CP046320.1_4512794_4512995_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|747aa|up_1|NZ_CP046320.1_4513073_4515314_+	COG3378, COG3378, Phage associated DNA primase [General function prediction only]	NA|77aa|up_0|NZ_CP046320.1_4515315_4515546_+	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|166aa|down_0|NZ_CP046320.1_4516698_4517196_+	NA	NA|562aa|down_1|NZ_CP046320.1_4517195_4518881_+	NA	NA|160aa|down_2|NZ_CP046320.1_4518852_4519332_+	NA	NA|71aa|down_3|NZ_CP046320.1_4519340_4519553_+	NA	NA|151aa|down_4|NZ_CP046320.1_4519584_4520037_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|303aa|down_5|NZ_CP046320.1_4520095_4521004_-	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|421aa|down_6|NZ_CP046320.1_4521135_4522398_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|151aa|down_7|NZ_CP046320.1_4522410_4522863_-	cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion	NA|93aa|down_8|NZ_CP046320.1_4522869_4523148_-	NA	NA|56aa|down_9|NZ_CP046320.1_4523255_4523423_+	NA
GCF_009730435.1_ASM973043v1	NZ_CP046320	Gordonia bronchialis strain FDAARGOS_676 chromosome, complete genome	4	4635036-4635131	4	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas4,DinG,cas3	Orphan	GGGGAAGGATTTCCTTCCCCCACTTT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas4,DinG,cas3	NA|105aa|up_5|NZ_CP046320.1_4629768_4630083_-,NA|817aa|down_1|NZ_CP046320.1_4638072_4640523_+,NA|281aa|down_2|NZ_CP046320.1_4640559_4641402_+,NA|69aa|down_4|NZ_CP046320.1_4642907_4643114_+,NA|215aa|down_6|NZ_CP046320.1_4643800_4644445_-	NA|204aa|up_9|NZ_CP046320.1_4627604_4628216_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|123aa|up_8|NZ_CP046320.1_4628241_4628610_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|110aa|up_7|NZ_CP046320.1_4628630_4628960_-	pfam15588, Imm10, Immunity protein 10	NA|215aa|up_6|NZ_CP046320.1_4629062_4629707_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|105aa|up_5|NZ_CP046320.1_4629768_4630083_-	NA	NA|212aa|up_4|NZ_CP046320.1_4630110_4630746_-	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|318aa|up_3|NZ_CP046320.1_4630821_4631775_-	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|147aa|up_2|NZ_CP046320.1_4631785_4632226_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|461aa|up_1|NZ_CP046320.1_4632305_4633688_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|441aa|up_0|NZ_CP046320.1_4633684_4635007_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|775aa|down_0|NZ_CP046320.1_4635142_4637467_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|817aa|down_1|NZ_CP046320.1_4638072_4640523_+	NA	NA|281aa|down_2|NZ_CP046320.1_4640559_4641402_+	NA	NA|424aa|down_3|NZ_CP046320.1_4641404_4642676_-	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|69aa|down_4|NZ_CP046320.1_4642907_4643114_+	NA	NA|128aa|down_5|NZ_CP046320.1_4643110_4643494_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|215aa|down_6|NZ_CP046320.1_4643800_4644445_-	NA	NA|368aa|down_7|NZ_CP046320.1_4645752_4646856_-	pfam04213, HtaA, Htaa	NA|315aa|down_8|NZ_CP046320.1_4646928_4647873_+	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein	NA|361aa|down_9|NZ_CP046320.1_4647882_4648965_-	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2
