assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009730355.1_ASM973035v1	NZ_CP046348	Citrobacter portucalensis strain FDAARGOS_738 chromosome, complete genome	1	2195001-2195119	1	CRISPRCasFinder	no		DEDDh,cas3,DinG,WYL,RT,csa3	Orphan	CGGCCTACATCGGTATGCTGGTCTTGTAGGCC	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,WYL,RT,csa3	NA,NA	NA|319aa|up_9|NZ_CP046348.1_2184645_2185602_-	TIGR03148, cyt_nit_nrfD, cytochrome c nitrite reductase, NrfD subunit	NA|224aa|up_8|NZ_CP046348.1_2185598_2186270_-	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|189aa|up_7|NZ_CP046348.1_2186266_2186833_-	PRK11659, PRK11659, cytochrome c nitrite reductase pentaheme subunit; Provisional	NA|479aa|up_6|NZ_CP046348.1_2186877_2188314_-	PRK11125, nrfA, ammonia-forming cytochrome c nitrite reductase	NA|653aa|up_5|NZ_CP046348.1_2188748_2190707_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|105aa|up_4|NZ_CP046348.1_2190898_2191213_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|550aa|up_3|NZ_CP046348.1_2191209_2192859_+	PRK09395, actP, cation/acetate symporter ActP	NA|230aa|up_2|NZ_CP046348.1_2192904_2193594_-	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]	NA|137aa|up_1|NZ_CP046348.1_2193586_2193997_-	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only]	NA|297aa|up_0|NZ_CP046348.1_2194098_2194989_+	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold	NA|549aa|down_0|NZ_CP046348.1_2195136_2196783_-	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|450aa|down_1|NZ_CP046348.1_2196940_2198290_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|153aa|down_2|NZ_CP046348.1_2198898_2199357_-	PRK15002, PRK15002, redox-sensitive transcriptional activator SoxR	NA|108aa|down_3|NZ_CP046348.1_2199443_2199767_+	PRK10219, PRK10219, superoxide response transcriptional regulator SoxS	NA|529aa|down_4|NZ_CP046348.1_2199769_2201356_-	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]	NA|94aa|down_5|NZ_CP046348.1_2201908_2202190_+	pfam15940, YjcB, Family of unknown function	NA|770aa|down_6|NZ_CP046348.1_2202271_2204581_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|175aa|down_7|NZ_CP046348.1_2204958_2205483_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|941aa|down_8|NZ_CP046348.1_2205734_2208557_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|119aa|down_9|NZ_CP046348.1_2208641_2208998_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_009730355.1_ASM973035v1	NZ_CP046348	Citrobacter portucalensis strain FDAARGOS_738 chromosome, complete genome	2	3177232-3177473	1	PILER-CR	no		DEDDh,cas3,DinG,WYL,RT,csa3	Orphan	GCTTTCTGGGTAAACCAGATGAATGACTGTCCACGACGCTATGCTCAAAAGAAC	54	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,DinG,WYL,RT,csa3	NA,NA|50aa|down_9|NZ_CP046348.1_3190791_3190941_-	NA|458aa|up_9|NZ_CP046348.1_3166033_3167407_-	TIGR00827, PTS_system_galactitol-specific_IIC_component, PTS system, galactitol-specific IIC component	NA|95aa|up_8|NZ_CP046348.1_3167411_3167696_-	PRK10310, PRK10310, PTS galactitol transporter subunit IIB	NA|155aa|up_7|NZ_CP046348.1_3167725_3168190_-	PRK09665, PRK09665, PTS galactitol transporter subunit IIA	NA|424aa|up_6|NZ_CP046348.1_3168204_3169476_-	PRK15052, PRK15052, tagatose-bisphosphate aldolase subunit GatZ	NA|285aa|up_5|NZ_CP046348.1_3169609_3170464_-	PRK09195, gatY, tagatose-bisphosphate aldolase; Reviewed	NA|524aa|up_4|NZ_CP046348.1_3170642_3172214_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|NZ_CP046348.1_3172619_3173954_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NZ_CP046348.1_3173969_3174740_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NZ_CP046348.1_3174770_3175661_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NZ_CP046348.1_3175726_3176872_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|313aa|down_0|NZ_CP046348.1_3178354_3179293_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_1|NZ_CP046348.1_3179391_3180381_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_2|NZ_CP046348.1_3180403_3181735_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_3|NZ_CP046348.1_3181766_3182975_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_4|NZ_CP046348.1_3183003_3185298_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|132aa|down_5|NZ_CP046348.1_3185311_3185707_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_6|NZ_CP046348.1_3185794_3187159_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_7|NZ_CP046348.1_3188070_3189402_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|down_8|NZ_CP046348.1_3189426_3190737_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|50aa|down_9|NZ_CP046348.1_3190791_3190941_-	NA
GCF_009730355.1_ASM973035v1	NZ_CP046348	Citrobacter portucalensis strain FDAARGOS_738 chromosome, complete genome	3	3229592-3229688	2	CRISPRCasFinder	no		DEDDh,cas3,DinG,WYL,RT,csa3	Orphan	AGCGCATCAGGCGGCGCAAAAGCCTTATC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,WYL,RT,csa3	NA,NA	NA|150aa|up_9|NZ_CP046348.1_3217037_3217487_-	PRK10202, ebgC, beta-galactosidase subunit beta	NA|1031aa|up_8|NZ_CP046348.1_3217483_3220576_-	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|328aa|up_7|NZ_CP046348.1_3220783_3221767_-	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|111aa|up_6|NZ_CP046348.1_3221976_3222309_+	PRK10089, PRK10089, chaperone CsaA	NA|497aa|up_5|NZ_CP046348.1_3222386_3223877_-	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|507aa|up_4|NZ_CP046348.1_3224196_3225717_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|223aa|up_3|NZ_CP046348.1_3225770_3226439_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|258aa|up_2|NZ_CP046348.1_3226677_3227451_+	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]	NA|283aa|up_1|NZ_CP046348.1_3227451_3228300_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|385aa|up_0|NZ_CP046348.1_3228367_3229522_+	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|553aa|down_0|NZ_CP046348.1_3229787_3231446_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|366aa|down_1|NZ_CP046348.1_3232007_3233105_+	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|642aa|down_2|NZ_CP046348.1_3233195_3235121_+	PRK11388, PRK11388, DNA-binding transcriptional regulator DhaR; Provisional	NA|177aa|down_3|NZ_CP046348.1_3235098_3235629_-	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|118aa|down_4|NZ_CP046348.1_3235629_3235983_-	pfam02288, Dehydratase_MU, Dehydratase medium subunit	NA|388aa|down_5|NZ_CP046348.1_3235999_3237163_-	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|143aa|down_6|NZ_CP046348.1_3237185_3237614_-	pfam03928, Haem_degrading, Haem-degrading	NA|556aa|down_7|NZ_CP046348.1_3238006_3239674_+	pfam02286, Dehydratase_LU, Dehydratase large subunit	NA|195aa|down_8|NZ_CP046348.1_3239685_3240270_+	PRK15042, pduD, propanediol/glycerol family dehydratase medium subunit	NA|143aa|down_9|NZ_CP046348.1_3240272_3240701_+	pfam02287, Dehydratase_SU, Dehydratase small subunit
GCF_009730355.1_ASM973035v1	NZ_CP046348	Citrobacter portucalensis strain FDAARGOS_738 chromosome, complete genome	4	4013239-4013344	3	CRISPRCasFinder	no		DEDDh,cas3,DinG,WYL,RT,csa3	Orphan	CCCACCCTGTACCACTTTTTTTAA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,WYL,RT,csa3	NA,NA|219aa|down_2|NZ_CP046348.1_4015981_4016638_-	NA|72aa|up_9|NZ_CP046348.1_4002532_4002748_+	pfam07191, zinc-ribbons_6, zinc-ribbons	NA|458aa|up_8|NZ_CP046348.1_4002744_4004118_-	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|489aa|up_7|NZ_CP046348.1_4004278_4005745_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|526aa|up_6|NZ_CP046348.1_4005808_4007386_+	PRK00074, guaA, GMP synthase; Reviewed	NA|418aa|up_5|NZ_CP046348.1_4007589_4008843_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|312aa|up_4|NZ_CP046348.1_4008956_4009892_-	smart00974, T5orf172, This entry represents the putative helicase A859L	NA|291aa|up_3|NZ_CP046348.1_4010002_4010875_-	pfam12835, Integrase_1, Integrase	NA|77aa|up_2|NZ_CP046348.1_4011842_4012073_+	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|110aa|up_1|NZ_CP046348.1_4012263_4012593_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|119aa|up_0|NZ_CP046348.1_4012687_4013044_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|690aa|down_0|NZ_CP046348.1_4013362_4015432_-	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|85aa|down_1|NZ_CP046348.1_4015428_4015683_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|219aa|down_2|NZ_CP046348.1_4015981_4016638_-	NA	NA|770aa|down_3|NZ_CP046348.1_4016949_4019259_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|626aa|down_4|NZ_CP046348.1_4019255_4021133_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|1315aa|down_5|NZ_CP046348.1_4021617_4025562_+	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms]	NA|293aa|down_6|NZ_CP046348.1_4025909_4026788_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|68aa|down_7|NZ_CP046348.1_4027145_4027349_-	pfam11119, DUF2633, Protein of unknown function (DUF2633)	NA|757aa|down_8|NZ_CP046348.1_4027699_4029970_+	smart00052, EAL, Putative diguanylate phosphodiesterase	NA|514aa|down_9|NZ_CP046348.1_4029949_4031491_-	PRK10854, PRK10854, exopolyphosphatase; Provisional
