The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046308	Mycobacterium tuberculosis strain FDAARGOS_751 chromosome, complete genome	4441988	1616434	1654714	4441988	protease,tRNA,head,terminase,integrase,capsid	Mycobacterium_phage(30.0%)	46	1645243:1645270	1654867:1654894
WP_003413486.1|1616434_1618513_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|1618621_1618849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031649993.1|1618845_1620240_-	PE family protein	NA	NA	NA	NA	NA
WP_003413574.1|1621101_1621542_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|1621688_1622366_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|1622350_1622704_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|1622716_1623142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|1623138_1623813_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|1623890_1624712_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|1624847_1625741_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|1625743_1626562_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|1626576_1627758_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|1627816_1628248_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|1628761_1630003_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003413600.1|1630312_1630675_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|1631021_1632146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|1632147_1632687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|1632825_1634124_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|1634162_1634444_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003903963.1|1634588_1635074_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|1635100_1635358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899405.1|1637723_1637966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|1637966_1638644_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|1638839_1639496_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|1639658_1640105_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|1640279_1640612_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|1640731_1641091_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|1641192_1641651_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|1641786_1642167_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|1642163_1643660_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|1643849_1644086_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|1644158_1644332_+	hypothetical protein	NA	NA	NA	NA	NA
1645243:1645270	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|1645376_1645808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003908027.1|1645804_1646803_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	1.6e-61
WP_003900539.1|1646816_1647281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003908028.1|1647268_1647520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003901443.1|1647690_1649130_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|1649137_1649671_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|1649823_1650450_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
WP_003903987.1|1650481_1650805_-	type II toxin-antitoxin system toxin	NA	NA	NA	NA	NA
WP_003899415.1|1650884_1651130_-	antitoxin	NA	NA	NA	NA	NA
WP_003908030.1|1651126_1652554_-	DUF3631 domain-containing protein	NA	NA	NA	NA	NA
WP_003899417.1|1652555_1652948_-	DUF2742 domain-containing protein	NA	NA	NA	NA	NA
WP_003899418.1|1652944_1653205_-	helix-turn-helix domain-containing protein	NA	A0A2P1CHK7	Mycobacterium_phage	64.6	3.0e-15
WP_003900543.1|1653221_1653584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899420.1|1653586_1654714_-|integrase	site-specific integrase	integrase	A0A1X9SFC1	Mycobacterium_phage	40.4	1.5e-66
1654867:1654894	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 3
NZ_CP046308	Mycobacterium tuberculosis strain FDAARGOS_751 chromosome, complete genome	4441988	3982152	4026808	4441988	protease,transposase,tRNA,bacteriocin	Burkholderia_virus(28.57%)	40	NA	NA
WP_087902221.1|3982152_3983414_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_096362013.1|3983570_3984722_+|transposase	IS110-like element IS1547 family transposase	transposase	NA	NA	NA	NA
WP_003404092.1|3984711_3985509_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003404098.1|3985505_3986513_-	Dyp-type peroxidase	NA	NA	NA	NA	NA
WP_003404103.1|3986557_3987859_+	M18 family aminopeptidase	NA	NA	NA	NA	NA
WP_003898592.1|3987870_3988218_+	VOC family protein	NA	NA	NA	NA	NA
WP_003903182.1|3988211_3988868_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003404114.1|3989059_3991324_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	64.3	8.1e-274
WP_003903184.1|3991320_3991950_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003404120.1|3992070_3993027_+	phosphodiesterase	NA	NA	NA	NA	NA
WP_003898594.1|3992971_3994570_-	exopolysaccharide phosphotransferase CpsY	NA	NA	NA	NA	NA
WP_003404127.1|3994874_3995264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003404129.1|3995350_3996934_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	30.6	2.6e-45
WP_003404132.1|3996964_3998059_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	37.3	2.3e-56
WP_003404135.1|3998158_3998341_-	DUF3073 domain-containing protein	NA	NA	NA	NA	NA
WP_003404137.1|3998487_3999594_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_003404139.1|3999676_4000546_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_003898596.1|4000591_4001272_-	FABP family protein	NA	NA	NA	NA	NA
WP_003404278.1|4001434_4001737_-	DUF1416 domain-containing protein	NA	NA	NA	NA	NA
WP_003404293.1|4001738_4002572_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003903188.1|4002864_4003287_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_003404298.1|4003283_4004096_-	DUF2993 domain-containing protein	NA	NA	NA	NA	NA
WP_003903189.1|4004225_4004993_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.5	1.8e-15
WP_003404307.1|4004989_4005937_+	mycothiol synthase	NA	NA	NA	NA	NA
WP_003404312.1|4005979_4006756_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.1	1.6e-16
WP_003404314.1|4006811_4007453_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_003404316.1|4007510_4009565_-	LCP family protein	NA	NA	NA	NA	NA
WP_003898601.1|4009730_4010900_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003404321.1|4010987_4012004_-	acyl-ACP desaturase	NA	NA	NA	NA	NA
WP_003404326.1|4012165_4012807_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003898602.1|4012887_4013943_+	DUF2236 domain-containing protein	NA	NA	NA	NA	NA
WP_003404335.1|4013994_4014387_-	Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR	NA	NA	NA	NA	NA
WP_003404336.1|4014444_4014867_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_003900218.1|4014828_4015119_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003404349.1|4015223_4016129_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003903193.1|4016147_4016963_-	TIGR04255 family protein	NA	NA	NA	NA	NA
WP_031653752.1|4021174_4023823_-	PE family protein	NA	NA	NA	NA	NA
WP_003404362.1|4024290_4024935_+	sensor domain-containing protein	NA	NA	NA	NA	NA
WP_003898607.1|4024915_4025467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087902221.1|4025547_4026808_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
