The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	354640	370570	2895361	terminase,coat,integrase	Staphylococcus_phage(90.0%)	25	356176:356193	371277:371294
WP_001052483.1|354640_354832_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001261460.1|355075_355372_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000934799.1|355392_355896_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_000897044.1|355947_356190_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
356176:356193	attL	AAAGAAGAACAATAATAT	NA	NA	NA	NA
WP_000400841.1|356421_357141_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q4ZE81	Staphylococcus_phage	29.8	3.7e-23
WP_000270135.1|357253_358468_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	97.3	3.3e-221
WP_000230361.1|358628_359252_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001611932.1|359400_359565_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001138305.1|359565_359838_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	94.4	1.2e-43
WP_000784892.1|359849_360023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001231376.1|359989_360193_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
WP_000403837.1|360194_360578_+	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.1	4.8e-62
WP_001103967.1|360578_360905_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	96.3	3.5e-53
WP_001002709.1|360969_361839_+	hypothetical protein	NA	Q4ZE74	Staphylococcus_phage	96.2	5.3e-165
WP_000447468.1|361852_363562_+	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	92.8	8.2e-303
WP_000356942.1|363871_364252_+	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.8	1.7e-67
WP_001019762.1|364248_364890_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	92.5	4.7e-110
WP_001288442.1|365597_365942_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	91.7	1.3e-50
WP_000214170.1|365972_366626_+	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	99.5	7.6e-116
WP_000771361.1|366678_367206_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	100.0	6.8e-91
WP_001656917.1|367337_367550_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	97.1	5.4e-31
WP_001293071.1|367546_368116_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	4.6e-101
WP_000801980.1|368392_369361_+	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	2.7e-24
WP_073392942.1|369502_369940_+	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	58.2	9.8e-27
WP_000813311.1|370057_370570_+	hypothetical protein	NA	Q4ZE83	Staphylococcus_phage	100.0	1.4e-69
371277:371294	attR	AAAGAAGAACAATAATAT	NA	NA	NA	NA
>prophage 2
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	689272	719177	2895361	transposase,bacteriocin	Staphylococcus_phage(41.67%)	29	NA	NA
WP_001105942.1|689272_689947_+|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.4	1.3e-113
WP_001035802.1|689981_690194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000120605.1|690909_691224_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	4.7e-39
WP_000153633.1|691223_692513_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.1	5.6e-187
WP_000358995.1|692530_692926_+	thioredoxin-dependent arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
WP_000726502.1|693305_693599_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000713732.1|693673_695608_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000831610.1|695611_695923_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000593106.1|695934_696561_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.7	6.1e-22
WP_000277741.1|696922_698569_+|transposase	IS1182-like element ISSau3 family transposase	transposase	A0ZS58	Staphylococcus_virus	100.0	3.5e-295
WP_001643491.1|698723_699101_+	recombinase	NA	NA	NA	NA	NA
WP_001582045.1|699040_699367_+	recombinase	NA	NA	NA	NA	NA
WP_000273007.1|699433_699934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000145511.1|700298_701159_+	replication initiation protein	NA	NA	NA	NA	NA
WP_000761344.1|701245_701587_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001002795.1|701801_701897_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000843733.1|702446_703190_-	DUF536 domain-containing protein	NA	NA	NA	NA	NA
WP_000397995.1|705621_705945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001791613.1|706173_706266_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000377738.1|706567_707389_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000838599.1|707513_708509_+	YeiH family protein	NA	NA	NA	NA	NA
WP_000690626.1|708843_709419_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	2.9e-42
WP_155682216.1|709685_711731_+	copper-translocating P-type ATPase CopB	NA	E4ZFI9	Streptococcus_phage	29.2	2.3e-65
WP_000277154.1|711745_713179_+	multi-copper oxidase Mco	NA	NA	NA	NA	NA
WP_000277738.1|713245_714892_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.4	1.0e-289
WP_000378396.1|715254_717435_-	cadmium-translocating P-type ATPase CadA	NA	E4ZFI9	Streptococcus_phage	63.7	9.3e-251
WP_000159128.1|717427_717793_-	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	47.8	8.5e-24
WP_000361064.1|718030_718408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001105942.1|718502_719177_+|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.4	1.3e-113
>prophage 3
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	754223	762043	2895361		Hokovirus(16.67%)	10	NA	NA
WP_000244416.1|754223_755279_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|755278_755965_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|755939_756413_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093552.1|756754_757195_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637686.1|757474_758059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062968.1|758157_758871_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|758874_759294_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|759295_759964_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604508.1|760314_760908_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	6.8e-39
WP_001217804.1|760891_762043_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 4
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	774015	788153	2895361		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663016.1|774015_775074_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.5	5.7e-20
WP_155682221.1|775232_775775_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429002.1|776326_777244_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	8.2e-07
WP_031788440.1|777334_777436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193750.1|777513_779019_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930016.1|779358_779859_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_001068491.1|779878_780745_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|781546_781945_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|781907_784013_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|784132_785104_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000876311.1|785480_786452_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_001245566.1|786438_787395_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	60.0	5.5e-06
WP_000616865.1|787391_788153_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
>prophage 5
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	959781	1008605	2895361	transposase,tRNA,holin,protease	Bacillus_virus(22.22%)	44	NA	NA
WP_000121211.1|959781_960729_-|transposase	IS30-like element ISSau1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	100.0	1.1e-184
WP_073392975.1|960843_962313_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001067041.1|962363_963350_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.8e-15
WP_155682233.1|963352_964333_+	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.8e-15
WP_001574526.1|964325_964976_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001180271.1|964987_965869_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_094409958.1|965957_967525_-|transposase	IS3-like element ISSau2 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	51.8	1.0e-49
WP_001794171.1|967820_969467_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.4	1.7e-289
WP_000448933.1|969493_970483_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|970777_971173_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|971543_972263_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959276.1|972383_973370_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082722.1|973417_975226_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	9.3e-47
WP_000896691.1|975685_976492_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214067.1|976514_976880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224620.1|976983_977577_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242102.1|977762_978110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|978126_978762_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|978778_979588_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669938.1|979584_980439_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062404.1|980459_981845_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395156.1|981854_983699_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_000933195.1|983976_984747_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|984942_986028_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570704.1|986369_987938_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000889176.1|988080_988839_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060545.1|989004_989730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000355329.1|989731_990583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|991324_991834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001794241.1|991946_993155_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258649.1|993114_994290_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340133.1|994721_996206_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001794242.1|996186_996447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049957.1|996446_998009_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_000928413.1|998310_999114_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001794169.1|999332_1001657_+|protease	serine protease	protease	W5SAB9	Pithovirus	26.8	4.0e-10
WP_000021872.1|1001673_1003032_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414169.1|1003170_1004682_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1005170_1005740_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876825.1|1005949_1006168_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1006248_1007235_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1007433_1007610_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1007624_1008227_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_099119695.1|1008527_1008605_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
>prophage 6
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	1045410	1053883	2895361		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861576.1|1045410_1045893_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010391.1|1045879_1047004_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174050.1|1047007_1047712_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	7.3e-48
WP_000848351.1|1047711_1047975_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666808.1|1047976_1048648_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000032734.1|1048640_1050830_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.2	5.1e-140
WP_000483716.1|1050808_1052293_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.4	8.5e-46
WP_155682237.1|1052285_1053314_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.0e-61
WP_000238673.1|1053316_1053883_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
>prophage 7
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	1540978	1612000	2895361	terminase,tail,holin,head,capsid,integrase,protease,transposase,portal	Staphylococcus_phage(67.44%)	105	1570260:1570287	1612084:1612111
WP_001291561.1|1540978_1542196_-|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|1542277_1542481_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001845478.1|1542464_1542716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000857133.1|1542941_1543172_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|1543168_1543591_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_154021776.1|1543581_1543740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013670292.1|1543819_1543891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001227347.1|1544095_1544449_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_011058338.1|1544508_1544694_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_000691736.1|1544794_1546714_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_012386611.1|1546729_1546816_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|1547090_1548023_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|1548019_1549021_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_155682257.1|1549017_1551195_-	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
WP_000331160.1|1551197_1553645_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|1553628_1554135_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|1554109_1554607_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|1554723_1554945_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|1554987_1556193_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|1556215_1556368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|1556370_1557756_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|1557784_1558171_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|1558186_1558501_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_001825268.1|1558523_1558643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001791199.1|1558887_1559079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001791200.1|1559195_1559312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644393.1|1559342_1560002_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681744.1|1560078_1561047_+	asparaginase	NA	NA	NA	NA	NA
WP_001174260.1|1561161_1562148_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_016186859.1|1562308_1562395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069298.1|1562532_1563993_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902107.1|1564145_1565525_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.3	2.9e-56
WP_001163814.1|1565514_1566468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151997.1|1566575_1566824_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186908.1|1566929_1567475_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001799520.1|1567753_1567918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000476878.1|1568122_1569031_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000913238.1|1569088_1569994_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000464818.1|1570083_1570431_-	hypothetical protein	NA	Q4ZCJ7	Staphylococcus_virus	100.0	3.0e-26
1570260:1570287	attL	AAATAAACATATCATCATAATGAGATGG	NA	NA	NA	NA
WP_155716901.1|1570675_1571512_-	hypothetical protein	NA	D2JLG6	Staphylococcus_phage	99.6	2.5e-151
WP_000861038.1|1571889_1572645_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|1572656_1572911_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|1572962_1573070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|1573122_1573299_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000750406.1|1573407_1574181_-	staphylococcal enterotoxin type A	NA	A0EX09	Staphylococcus_phage	100.0	2.2e-146
WP_000340977.1|1574601_1574976_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040259.1|1575031_1575319_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	100.0	9.9e-44
WP_001153681.1|1575365_1575518_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_155716902.1|1575507_1579293_-	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	99.5	0.0e+00
WP_001154326.1|1579308_1580799_-	hypothetical protein	NA	D2JLF8	Staphylococcus_phage	99.8	4.1e-298
WP_155716903.1|1580798_1585448_-|tail	phage tail tape measure protein	tail	R9QSQ8	Staphylococcus_phage	98.8	0.0e+00
WP_000570353.1|1585503_1585626_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	100.0	6.9e-15
WP_000442604.1|1585685_1586132_-	hypothetical protein	NA	O80053	Staphylococcus_phage	93.9	8.7e-71
WP_000570645.1|1586196_1587150_-|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	95.0	6.9e-166
WP_000608369.1|1587150_1587531_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	81.7	8.7e-56
WP_000501001.1|1587527_1587905_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	86.4	6.2e-54
WP_000671501.1|1587904_1588237_-|head,tail	head-tail adaptor protein	head,tail	D2JLF1	Staphylococcus_phage	83.6	3.3e-51
WP_001177664.1|1588226_1588559_-|head,tail	phage head-tail adapter protein	head,tail	A7TWQ4	Staphylococcus_phage	80.9	4.6e-45
WP_001240639.1|1588567_1588726_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	88.5	3.9e-18
WP_000849953.1|1588762_1589998_-|capsid	phage major capsid protein	capsid	Q8SDK8	Staphylococcus_phage	79.5	1.0e-169
WP_025173991.1|1590084_1590669_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	95.9	3.0e-103
WP_155716910.1|1591087_1592284_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	87.4	1.1e-197
WP_001052526.1|1592346_1592550_-	hypothetical protein	NA	D2JLE5	Staphylococcus_phage	75.4	4.3e-17
WP_000568449.1|1592563_1594258_-|terminase	terminase	terminase	D2JLE4	Staphylococcus_phage	90.6	3.4e-301
WP_000919030.1|1594257_1594728_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	93.5	2.6e-78
WP_000026170.1|1594821_1595187_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	72.7	1.5e-49
WP_000406186.1|1595193_1595646_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	88.0	3.3e-70
WP_002955176.1|1595760_1596222_-	hypothetical protein	NA	R9QT84	Staphylococcus_phage	99.3	2.5e-73
WP_000265041.1|1596244_1596445_-	DUF1514 domain-containing protein	NA	R9QT57	Staphylococcus_phage	100.0	1.1e-28
WP_001005262.1|1596444_1597095_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_000595238.1|1597253_1597403_-	transcriptional activator RinB	NA	A7TWB4	Staphylococcus_phage	100.0	4.8e-18
WP_000483477.1|1597395_1597632_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
WP_000195767.1|1597656_1597893_-	DUF1381 domain-containing protein	NA	M1T303	Staphylococcus_phage	98.7	3.6e-36
WP_001282074.1|1597889_1598135_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_155716904.1|1598171_1598708_-	dUTPase	NA	Q9MBR0	Staphylococcus_prophage	99.4	7.9e-95
WP_078059846.1|1598700_1598895_-	hypothetical protein	NA	M1SVE4	Staphylococcus_phage	98.4	1.4e-25
WP_155716905.1|1598857_1599112_-	DUF1024 family protein	NA	Q4ZBD2	Staphylococcus_virus	97.6	4.2e-38
WP_095256467.1|1599152_1599395_-	hypothetical protein	NA	A0A2I6PDM0	Staphylococcus_phage	93.8	5.2e-38
WP_155716906.1|1599398_1599755_-	hypothetical protein	NA	M1RZB8	Staphylococcus_phage	89.8	5.9e-54
WP_001187233.1|1599755_1599941_-	DUF3113 family protein	NA	M1SNY0	Staphylococcus_phage	100.0	1.4e-27
WP_000049805.1|1599945_1600350_-	DUF1064 domain-containing protein	NA	A0A059T5A5	Staphylococcus_phage	97.0	7.8e-71
WP_001123690.1|1600360_1600582_-	DUF3269 family protein	NA	Q4ZA48	Staphylococcus_virus	100.0	1.7e-35
WP_000803062.1|1600750_1601530_-	AAA domain-containing protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000190253.1|1601539_1602310_-	hypothetical protein	NA	A0A1W6JQ00	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1602375_1602657_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_155716907.1|1602795_1603467_-	hypothetical protein	NA	Q8SDM2	Staphylococcus_phage	99.6	9.8e-127
WP_000704705.1|1603479_1604031_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_000134097.1|1604059_1604848_-	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	100.0	2.6e-142
WP_098683526.1|1604840_1605062_-	DUF2483 domain-containing protein	NA	A0A1X9H047	Staphylococcus_phage	98.6	2.7e-33
WP_000291090.1|1605071_1605332_-	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_001285949.1|1605423_1605585_-	DUF1270 domain-containing protein	NA	Q4ZDR6	Staphylococcus_virus	98.1	1.9e-20
WP_001124198.1|1605596_1605860_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001037095.1|1605889_1606108_-	hypothetical protein	NA	A0A2I6PDV4	Staphylococcus_phage	100.0	5.0e-32
WP_001025595.1|1606104_1606431_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_000801108.1|1606486_1606714_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000389906.1|1606715_1606907_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
WP_000351245.1|1606963_1607503_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	99.4	1.5e-96
WP_000435341.1|1607526_1607787_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_155716908.1|1607812_1608589_-	transcriptional regulator	NA	A0A2D1G5J2	Staphylococcus_phage	89.1	2.0e-123
WP_015978369.1|1608611_1608839_-	helix-turn-helix transcriptional regulator	NA	Q4ZB05	Staphylococcus_virus	100.0	1.6e-36
WP_155716909.1|1608992_1609622_+	helix-turn-helix domain-containing protein	NA	Q4ZB06	Staphylococcus_virus	99.0	2.2e-112
WP_000705240.1|1609692_1609875_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001795334.1|1609911_1610058_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000191459.1|1610054_1610669_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_000264747.1|1610794_1612000_+|integrase	site-specific integrase	integrase	A0A2I6PEZ6	Staphylococcus_phage	100.0	1.6e-223
1612084:1612111	attR	AAATAAACATATCATCATAATGAGATGG	NA	NA	NA	NA
>prophage 8
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	1675558	1683870	2895361	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1675558_1676344_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924211.1|1676469_1677360_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062173.1|1677369_1678716_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	1.4e-55
WP_000683921.1|1678829_1679930_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	3.0e-08
WP_000624581.1|1679932_1680610_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1680740_1681847_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217253.1|1682070_1683870_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 9
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	1753304	1762347	2895361	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1753304_1753823_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595001.1|1753844_1756118_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	6.2e-64
WP_000749802.1|1756320_1758600_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1758874_1759135_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1759153_1760293_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1760315_1761341_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1761342_1762347_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 10
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	1892073	1969695	2895361	transposase,tRNA,protease	Staphylococcus_phage(93.02%)	75	NA	NA
WP_001050520.1|1892073_1898643_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	88.7	1.7e-295
WP_000836472.1|1898966_1899278_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	96.1	4.5e-50
WP_001108722.1|1899299_1901714_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	98.8	0.0e+00
WP_001025064.1|1902005_1903187_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_000526541.1|1903297_1904251_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_000764425.1|1904247_1904811_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	1.1e-99
WP_000757543.1|1904929_1905331_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266099.1|1905903_1906731_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1906733_1906853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196351.1|1906964_1907966_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.1	5.0e-183
WP_001008556.1|1908087_1908552_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	1.9e-68
WP_001159032.1|1908564_1909746_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493891.1|1909756_1910389_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	8.4e-112
WP_001819953.1|1910395_1911427_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.3	5.8e-195
WP_001261683.1|1911919_1913422_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000221181.1|1914064_1914379_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	97.1	1.7e-52
WP_000989104.1|1914378_1915671_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	95.1	2.6e-216
WP_001032833.1|1915757_1916612_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1916887_1917112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671059.1|1917310_1917781_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	85.8	7.7e-70
WP_001152695.1|1917893_1918337_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030476.1|1918323_1918767_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.4	2.4e-49
WP_001168914.1|1919064_1919700_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000492901.1|1919866_1920487_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|1920944_1921658_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091444.1|1921916_1922219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1922473_1922839_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623481.1|1922835_1923189_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	97.4	4.2e-20
WP_000453316.1|1923438_1924272_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	1.2e-158
WP_000366165.1|1924483_1925392_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.7	9.8e-138
WP_000933819.1|1925516_1926710_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109909.1|1927081_1928674_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_001801476.1|1928966_1929713_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.2	3.3e-139
WP_000672010.1|1929717_1930191_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	9.5e-84
WP_000718107.1|1930256_1930514_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778539.1|1930510_1931512_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	96.7	8.5e-183
WP_000348372.1|1931516_1932995_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.2	2.4e-282
WP_016186903.1|1933153_1933609_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	94.5	3.5e-75
WP_001794016.1|1933909_1934560_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	1.0e-51
WP_000070654.1|1934640_1935636_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	3.8e-74
WP_000669038.1|1935711_1936338_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	4.5e-81
WP_000627550.1|1936378_1936723_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	5.1e-55
WP_000414222.1|1936820_1937393_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_001093574.1|1937541_1938909_-	FRG domain-containing protein	NA	NA	NA	NA	NA
WP_000125075.1|1938908_1939478_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	54.8	2.2e-39
WP_000747804.1|1939670_1940117_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001801861.1|1940567_1940663_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791232.1|1940785_1940887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037039.1|1941061_1941505_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000731421.1|1941504_1941948_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000182553.1|1942914_1945335_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_001819963.1|1945460_1945820_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000619920.1|1946047_1946497_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001053714.1|1946539_1948150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000095390.1|1948164_1948464_+	secretion protein	NA	NA	NA	NA	NA
WP_000413389.1|1948725_1950543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000072622.1|1950579_1951734_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	36.3	7.8e-39
WP_001794363.1|1951726_1953466_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	98.6	3.2e-286
WP_001038742.1|1953645_1954365_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
WP_001038734.1|1954533_1955250_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	97.1	6.6e-129
WP_001038766.1|1956295_1957012_-|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	62.6	5.5e-83
WP_000134545.1|1957145_1957430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000805733.1|1957580_1957901_+	DUF961 domain-containing protein	NA	NA	NA	NA	NA
WP_000386891.1|1957914_1958217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000172943.1|1958391_1959483_+	replication initiation factor domain-containing protein	NA	NA	NA	NA	NA
WP_000692002.1|1959543_1960599_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_000015639.1|1960603_1960864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000358144.1|1960875_1961259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049264.1|1961293_1963789_+	DUF87 domain-containing protein	NA	NA	NA	NA	NA
WP_001251212.1|1963842_1965201_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	29.7	2.0e-41
WP_000681143.1|1965205_1967053_+	membrane protein	NA	NA	NA	NA	NA
WP_000247469.1|1967042_1968089_+	CHAP domain-containing protein	NA	A0A1X9I9L1	Staphylococcus_phage	36.9	8.1e-19
WP_000810443.1|1968095_1968686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001255377.1|1968741_1969083_+	cystatin-like fold lipoprotein	NA	NA	NA	NA	NA
WP_000746371.1|1969191_1969695_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP033112	Staphylococcus aureus strain ST20130944 chromosome, complete genome	2895361	2063697	2174933	2895361	tRNA,terminase,coat,tail,holin,head,capsid,integrase,protease,portal	Staphylococcus_phage(86.6%)	136	2158221:2158240	2172955:2172974
WP_000170162.1|2063697_2064000_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957023.1|2064366_2065905_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831695.1|2065993_2067193_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774552.1|2067205_2069209_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	9.8e-114
WP_000992924.1|2069212_2071405_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272063.1|2071401_2072094_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2072276_2072579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155682269.1|2072687_2073983_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	8.0e-16
WP_000827736.1|2074833_2076000_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434532.1|2076030_2076354_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|2076647_2076821_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2076801_2077404_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040861.1|2077673_2078495_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284434.1|2078487_2079957_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.5	8.5e-107
WP_000897633.1|2080140_2081217_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177832.1|2081236_2082031_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_031788442.1|2082102_2082210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323171.1|2082220_2083783_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275719.1|2083987_2085085_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	8.7e-48
WP_000149686.1|2085457_2086018_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2086070_2087000_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|2087192_2087366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021224.1|2087417_2088797_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|2088916_2089945_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2090215_2090617_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2090673_2090847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188074.1|2091297_2092338_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713064.1|2092394_2093237_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033968.1|2093233_2093791_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2093850_2094375_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2094495_2095059_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221650.1|2095122_2095863_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|2095862_2096735_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_155682270.1|2096731_2097412_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991315.1|2097412_2098309_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|2098305_2098686_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681966.1|2098943_2099120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2099361_2099460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068528.1|2099659_2100946_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000669728.1|2103138_2105208_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|2106165_2106345_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2106655_2106916_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2106968_2107319_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|2108004_2108454_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_020444758.1|2108548_2109007_-	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
WP_000919350.1|2109533_2110025_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|2110215_2110971_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2110982_2111237_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|2111288_2111396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2111448_2111625_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000750406.1|2111733_2112507_-	staphylococcal enterotoxin type A	NA	A0EX09	Staphylococcus_phage	100.0	2.2e-146
WP_000340977.1|2112927_2113302_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040259.1|2113357_2113645_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	100.0	9.9e-44
WP_001153681.1|2113691_2113844_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582190.1|2113833_2117619_-	hypothetical protein	NA	A0EX05	Staphylococcus_phage	100.0	0.0e+00
WP_000567413.1|2117634_2119119_-|tail	phage tail protein	tail	A0EX04	Staphylococcus_phage	100.0	4.5e-297
WP_155682271.1|2119115_2123645_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	99.9	0.0e+00
WP_001096355.1|2123889_2124240_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2124289_2124514_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_155682272.1|2124555_2125200_-|tail	phage tail protein	tail	A0EWZ9	Staphylococcus_phage	99.5	1.1e-119
WP_000565498.1|2125200_2125608_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|2125604_2126009_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|2126005_2126368_-|head,tail	phage head-tail adapter protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2126351_2126636_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|2126625_2126910_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|2126929_2128075_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|2128098_2128836_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|2128819_2130007_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|2130022_2131684_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2131680_2132025_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|2132154_2132454_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|2132685_2133102_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|2133129_2133330_-	DUF1514 domain-containing protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|2133329_2133479_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000592207.1|2133475_2133862_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000195803.1|2133858_2134065_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000185659.1|2134101_2134644_-	dUTP pyrophosphatase	NA	A0EWY2	Staphylococcus_phage	100.0	1.1e-96
WP_000028422.1|2134636_2134819_-	hypothetical protein	NA	A0EWY1	Staphylococcus_phage	100.0	2.6e-26
WP_001065091.1|2134808_2135060_-	DUF1024 family protein	NA	A0EWY0	Staphylococcus_phage	100.0	1.9e-38
WP_000131366.1|2135231_2135474_-	hypothetical protein	NA	A0EWX8	Staphylococcus_phage	100.0	3.9e-41
WP_000101274.1|2135477_2135846_-	hypothetical protein	NA	W5RAK8	Staphylococcus_phage	100.0	8.2e-51
WP_000338531.1|2136176_2136395_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	98.6	1.2e-36
WP_000148316.1|2136401_2137286_-	DnaD domain protein	NA	A0EWX4	Staphylococcus_phage	100.0	5.4e-141
WP_000934764.1|2137315_2137786_-	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	100.0	7.4e-81
WP_071621397.1|2137786_2138404_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138472.1|2138484_2139405_-	recombinase	NA	S4SUN6	Staphylococcus_phage	100.0	2.3e-166
WP_000700577.1|2139406_2141350_-	AAA family ATPase	NA	A0EWX0	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|2141358_2141622_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291503.1|2141630_2141891_-	DUF1108 family protein	NA	A0EWW8	Staphylococcus_phage	100.0	8.9e-44
WP_155682274.1|2141871_2142198_-	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	75.9	5.6e-35
WP_000066017.1|2142292_2142454_-	DUF1270 domain-containing protein	NA	D2JGJ6	Staphylococcus_phage	100.0	4.3e-20
WP_001120197.1|2142450_2142771_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|2142829_2143462_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|2143476_2143617_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148855.1|2143647_2143845_-	hypothetical protein	NA	Q8SDM8	Staphylococcus_phage	100.0	7.0e-33
WP_001148605.1|2143860_2144613_-	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_000128907.1|2144663_2144993_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001025874.1|2144981_2145197_-	DUF2829 domain-containing protein	NA	A0EWV9	Staphylococcus_phage	100.0	6.3e-35
WP_000854072.1|2145212_2145476_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001801500.1|2145472_2145646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001031454.1|2145608_2146322_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000759682.1|2146337_2147270_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_000591749.1|2147275_2147617_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000705248.1|2147820_2148003_+	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000825947.1|2148102_2148567_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000857191.1|2148625_2149663_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
WP_000595617.1|2150802_2151822_-	beta-channel forming cytolysin	NA	A0A2I6PEU3	Staphylococcus_phage	39.6	3.4e-54
WP_000791402.1|2151843_2152899_-	succinyl-diaminopimelate desuccinylase	NA	A0A2I6PER8	Staphylococcus_phage	34.6	7.9e-38
WP_000206618.1|2153330_2154554_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045073.1|2154992_2156300_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_001573771.1|2156877_2157219_-	hypothetical protein	NA	C8CH40	Staphylococcus_phage	46.0	4.1e-20
WP_001573769.1|2157208_2157505_-	hypothetical protein	NA	C8CH40	Staphylococcus_phage	40.4	6.7e-11
WP_000201397.1|2157501_2157681_-	hypothetical protein	NA	NA	NA	NA	NA
2158221:2158240	attL	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_001239269.1|2158799_2159735_+	TDT family transporter	NA	NA	NA	NA	NA
WP_000812237.1|2160589_2160817_-	hypothetical protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	47.4	1.9e-13
WP_001035597.1|2161235_2161940_+	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
WP_001293073.1|2162094_2162664_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	3.5e-101
WP_000358778.1|2162660_2163002_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	100.0	1.7e-58
WP_000771368.1|2163004_2163532_-|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_000448775.1|2163582_2163801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000846285.1|2163818_2164397_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_001190608.1|2164408_2164750_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	98.2	7.1e-57
WP_001019766.1|2165285_2165927_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	94.8	3.5e-113
WP_000356937.1|2165923_2166304_-	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	100.0	6.9e-69
WP_000447451.1|2166615_2168325_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	100.0	0.0e+00
WP_001002721.1|2168338_2169208_-	hypothetical protein	NA	Q4ZE74	Staphylococcus_phage	99.3	6.0e-169
WP_001103930.1|2169271_2169589_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	1.6e-18
WP_000403839.1|2169589_2169973_-	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.1	9.7e-63
WP_001231378.1|2169974_2170178_-	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	97.0	7.5e-30
WP_155682275.1|2170162_2170318_-	pathogenicity island protein	NA	NA	NA	NA	NA
WP_000481967.1|2170314_2170632_-	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
WP_000153640.1|2170636_2170855_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000620857.1|2171027_2171702_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_000179345.1|2171715_2172888_+|integrase	site-specific integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	98.2	3.5e-220
WP_000240651.1|2172956_2174573_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	2.6e-157
2172955:2172974	attR	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_000917289.1|2174648_2174933_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
