assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009709535.1_ASM970953v1	NZ_CP039240	Piscirickettsia salmonis strain MR5 chromosome, complete genome	1	685934-686033	1	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3	Orphan	AATAAATATTAATTTTTTAAATT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|163aa|up_9|NZ_CP039240.1_677465_677954_-,NA|51aa|up_8|NZ_CP039240.1_678243_678396_-,NA|103aa|up_7|NZ_CP039240.1_678671_678980_+,NA|353aa|up_3|NZ_CP039240.1_682566_683625_-,NA|189aa|down_1|NZ_CP039240.1_687768_688335_+,NA|210aa|down_4|NZ_CP039240.1_690481_691111_+	NA|163aa|up_9|NZ_CP039240.1_677465_677954_-	NA	NA|51aa|up_8|NZ_CP039240.1_678243_678396_-	NA	NA|103aa|up_7|NZ_CP039240.1_678671_678980_+	NA	NA|117aa|up_6|NZ_CP039240.1_678976_679327_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|466aa|up_5|NZ_CP039240.1_679369_680767_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|218aa|up_4|NZ_CP039240.1_681130_681784_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|353aa|up_3|NZ_CP039240.1_682566_683625_-	NA	NA|130aa|up_2|NZ_CP039240.1_683903_684293_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|129aa|up_1|NZ_CP039240.1_684289_684676_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|up_0|NZ_CP039240.1_684659_685217_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|264aa|down_0|NZ_CP039240.1_686436_687228_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|189aa|down_1|NZ_CP039240.1_687768_688335_+	NA	NA|325aa|down_2|NZ_CP039240.1_689003_689978_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|133aa|down_3|NZ_CP039240.1_690037_690436_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|210aa|down_4|NZ_CP039240.1_690481_691111_+	NA	NA|547aa|down_5|NZ_CP039240.1_691477_693118_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|450aa|down_6|NZ_CP039240.1_693230_694580_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|290aa|down_7|NZ_CP039240.1_694576_695446_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|105aa|down_8|NZ_CP039240.1_696192_696507_+	pfam01710, HTH_Tnp_IS630, Transposase	NA|236aa|down_9|NZ_CP039240.1_696503_697211_-	pfam13683, rve_3, Integrase core domain
GCF_009709535.1_ASM970953v1	NZ_CP039240	Piscirickettsia salmonis strain MR5 chromosome, complete genome	2	1073605-1073716	2	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3	Orphan	TCATGAAGTATTAATAATGCTTTTGTTAGGT	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|283aa|up_9|NZ_CP039240.1_1059374_1060223_+,NA|547aa|up_5|NZ_CP039240.1_1066676_1068317_-,NA	NA|283aa|up_9|NZ_CP039240.1_1059374_1060223_+	NA	NA|897aa|up_8|NZ_CP039240.1_1060514_1063205_+	cd04792, LanM-like, Cyclases involved in the biosynthesis of class II lantibiotics, and similar proteins	NA|388aa|up_7|NZ_CP039240.1_1063451_1064615_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|394aa|up_6|NZ_CP039240.1_1065345_1066527_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|547aa|up_5|NZ_CP039240.1_1066676_1068317_-	NA	NA|409aa|up_4|NZ_CP039240.1_1068905_1070132_+	PRK11010, ampG, muropeptide MFS transporter AmpG	NA|325aa|up_3|NZ_CP039240.1_1070329_1071304_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|122aa|up_2|NZ_CP039240.1_1071516_1071882_+	pfam13384, HTH_23, Homeodomain-like domain	NA|72aa|up_1|NZ_CP039240.1_1071938_1072154_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|180aa|up_0|NZ_CP039240.1_1072506_1073046_-	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]	NA|129aa|down_0|NZ_CP039240.1_1075012_1075399_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|down_1|NZ_CP039240.1_1075382_1075940_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|170aa|down_2|NZ_CP039240.1_1076731_1077241_-	pfam04986, Y2_Tnp, Putative transposase	NA|325aa|down_3|NZ_CP039240.1_1077917_1078892_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|138aa|down_4|NZ_CP039240.1_1080156_1080570_+	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins	NA|325aa|down_5|NZ_CP039240.1_1081187_1082162_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|156aa|down_6|NZ_CP039240.1_1082348_1082816_+	cd14663, STKc_SnRK3, Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3	NA|296aa|down_7|NZ_CP039240.1_1082877_1083764_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|437aa|down_8|NZ_CP039240.1_1083760_1085071_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|243aa|down_9|NZ_CP039240.1_1085073_1085802_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_009709535.1_ASM970953v1	NZ_CP039240	Piscirickettsia salmonis strain MR5 chromosome, complete genome	3	1444308-1444540	3	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3	Orphan	TTGAGGATTCTGCTTCTCAAGGTTCT	26	0	0	NA	NA	NA	4	4	Orphan	DEDDh,cas3,DinG,csa3	NA|265aa|up_9|NZ_CP039240.1_1433345_1434140_+,NA|112aa|up_5|NZ_CP039240.1_1439009_1439345_+,NA|137aa|up_4|NZ_CP039240.1_1439351_1439762_+,NA|207aa|up_2|NZ_CP039240.1_1440684_1441305_-,NA|78aa|up_1|NZ_CP039240.1_1441505_1441739_+,NA|580aa|up_0|NZ_CP039240.1_1442292_1444032_+,NA|138aa|down_6|NZ_CP039240.1_1454625_1455039_+,NA|227aa|down_7|NZ_CP039240.1_1456403_1457084_+,NA|294aa|down_8|NZ_CP039240.1_1457326_1458208_+	NA|265aa|up_9|NZ_CP039240.1_1433345_1434140_+	NA	NA|1038aa|up_8|NZ_CP039240.1_1434169_1437283_+	TIGR04346, DotA_TraY, conjugal transfer/type IV secretion protein DotA/TraY	NA|278aa|up_7|NZ_CP039240.1_1437319_1438153_+	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|207aa|up_6|NZ_CP039240.1_1438388_1439009_+	pfam11393, T4BSS_DotI_IcmL, Type-IV b secretion system, inner-membrane complex component	NA|112aa|up_5|NZ_CP039240.1_1439009_1439345_+	NA	NA|137aa|up_4|NZ_CP039240.1_1439351_1439762_+	NA	NA|322aa|up_3|NZ_CP039240.1_1439752_1440718_+	pfam14378, PAP2_3, PAP2 superfamily	NA|207aa|up_2|NZ_CP039240.1_1440684_1441305_-	NA	NA|78aa|up_1|NZ_CP039240.1_1441505_1441739_+	NA	NA|580aa|up_0|NZ_CP039240.1_1442292_1444032_+	NA	NA|424aa|down_0|NZ_CP039240.1_1447302_1448574_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|246aa|down_1|NZ_CP039240.1_1448598_1449336_+	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional	NA|381aa|down_2|NZ_CP039240.1_1449588_1450731_-	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB)	NA|534aa|down_3|NZ_CP039240.1_1450747_1452349_-	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|59aa|down_4|NZ_CP039240.1_1452819_1452996_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|426aa|down_5|NZ_CP039240.1_1452992_1454270_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|138aa|down_6|NZ_CP039240.1_1454625_1455039_+	NA	NA|227aa|down_7|NZ_CP039240.1_1456403_1457084_+	NA	NA|294aa|down_8|NZ_CP039240.1_1457326_1458208_+	NA	NA|139aa|down_9|NZ_CP039240.1_1458202_1458619_-	pfam13358, DDE_3, DDE superfamily endonuclease
