assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009709355.1_ASM970935v1	NZ_CP039190	Piscirickettsia salmonis strain Psal-160 chromosome, complete genome	1	351482-351611	1	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	40	351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565|351528-351565	NZ_CP039191.1_115225-115188|NZ_CP039191.1_104485-104522|NZ_CP039190.1_57067-57030|NZ_CP039190.1_255148-255111|NZ_CP039190.1_781974-781937|NZ_CP039190.1_850544-850507|NZ_CP039190.1_872689-872652|NZ_CP039190.1_1042614-1042577|NZ_CP039190.1_1573570-1573533|NZ_CP039190.1_1622423-1622386|NZ_CP039190.1_1968704-1968667|NZ_CP039190.1_2009225-2009188|NZ_CP039190.1_2079706-2079669|NZ_CP039190.1_2187142-2187105|NZ_CP039190.1_2415678-2415641|NZ_CP039190.1_2533584-2533547|NZ_CP039190.1_2549612-2549575|NZ_CP039190.1_2636566-2636529|NZ_CP039190.1_2937698-2937661|NZ_CP039190.1_46495-46532|NZ_CP039190.1_177365-177402|NZ_CP039190.1_182037-182074|NZ_CP039190.1_224247-224284|NZ_CP039190.1_287722-287759|NZ_CP039190.1_449568-449605|NZ_CP039190.1_519322-519359|NZ_CP039190.1_785200-785237|NZ_CP039190.1_1121748-1121785|NZ_CP039190.1_1318054-1318091|NZ_CP039190.1_1359906-1359943|NZ_CP039190.1_1384041-1384078|NZ_CP039190.1_1539446-1539483|NZ_CP039190.1_1571419-1571456|NZ_CP039190.1_2170493-2170530|NZ_CP039190.1_2312228-2312265|NZ_CP039190.1_2369058-2369095|NZ_CP039190.1_2726624-2726661|NZ_CP039190.1_2924507-2924544|NZ_CP039190.1_2934261-2934298|NZ_CP039190.1_602840-602877	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|485aa|up_9|NZ_CP039190.1_340775_342230_-,NA|73aa|up_8|NZ_CP039190.1_343092_343311_-,NA|65aa|up_5|NZ_CP039190.1_346185_346380_-,NA|105aa|up_1|NZ_CP039190.1_350260_350575_-,NA|97aa|down_0|NZ_CP039190.1_352140_352431_+,NA|233aa|down_1|NZ_CP039190.1_352468_353167_+,NA|99aa|down_2|NZ_CP039190.1_353183_353480_+,NA|282aa|down_3|NZ_CP039190.1_353603_354449_+,NA|128aa|down_4|NZ_CP039190.1_354653_355037_+,NA|192aa|down_5|NZ_CP039190.1_355309_355885_+	NA|485aa|up_9|NZ_CP039190.1_340775_342230_-	NA	NA|73aa|up_8|NZ_CP039190.1_343092_343311_-	NA	NA|85aa|up_7|NZ_CP039190.1_344084_344339_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP039190.1_345061_346048_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP039190.1_346185_346380_-	NA	NA|354aa|up_4|NZ_CP039190.1_347062_348124_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|468aa|up_3|NZ_CP039190.1_348285_349689_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_2|NZ_CP039190.1_349739_350315_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_1|NZ_CP039190.1_350260_350575_-	NA	NA|192aa|up_0|NZ_CP039190.1_350615_351191_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|97aa|down_0|NZ_CP039190.1_352140_352431_+	NA	NA|233aa|down_1|NZ_CP039190.1_352468_353167_+	NA	NA|99aa|down_2|NZ_CP039190.1_353183_353480_+	NA	NA|282aa|down_3|NZ_CP039190.1_353603_354449_+	NA	NA|128aa|down_4|NZ_CP039190.1_354653_355037_+	NA	NA|192aa|down_5|NZ_CP039190.1_355309_355885_+	NA	NA|278aa|down_6|NZ_CP039190.1_355942_356776_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_7|NZ_CP039190.1_356891_358076_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_8|NZ_CP039190.1_358094_359039_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_9|NZ_CP039190.1_359343_360129_+	TIGR03545, TIGR03545, TIGR03545 family protein
GCF_009709355.1_ASM970935v1	NZ_CP039190	Piscirickettsia salmonis strain Psal-160 chromosome, complete genome	2	516438-516558	2	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	AGCTTATCAATGGTTAGTAGCCCTTGGACTTAATCAA	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|61aa|up_1|NZ_CP039190.1_513766_513949_+,NA|47aa|down_0|NZ_CP039190.1_516829_516970_-,NA|141aa|down_1|NZ_CP039190.1_517002_517425_+,NA|137aa|down_2|NZ_CP039190.1_517668_518079_-,NA|71aa|down_5|NZ_CP039190.1_519357_519570_-,NA|158aa|down_9|NZ_CP039190.1_524971_525445_+	NA|243aa|up_9|NZ_CP039190.1_506268_506997_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|195aa|up_8|NZ_CP039190.1_507153_507738_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|228aa|up_7|NZ_CP039190.1_507741_508425_-	pfam02661, Fic, Fic/DOC family	NA|243aa|up_6|NZ_CP039190.1_508906_509635_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|396aa|up_5|NZ_CP039190.1_509966_511154_-	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|242aa|up_4|NZ_CP039190.1_511399_512125_+	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|265aa|up_3|NZ_CP039190.1_512303_513098_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|132aa|up_2|NZ_CP039190.1_513094_513490_-	pfam17775, UPF0225, UPF0225 domain	NA|61aa|up_1|NZ_CP039190.1_513766_513949_+	NA	NA|296aa|up_0|NZ_CP039190.1_514173_515060_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|47aa|down_0|NZ_CP039190.1_516829_516970_-	NA	NA|141aa|down_1|NZ_CP039190.1_517002_517425_+	NA	NA|137aa|down_2|NZ_CP039190.1_517668_518079_-	NA	NA|192aa|down_3|NZ_CP039190.1_518409_518985_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|122aa|down_4|NZ_CP039190.1_518930_519296_-	pfam13384, HTH_23, Homeodomain-like domain	NA|71aa|down_5|NZ_CP039190.1_519357_519570_-	NA	NA|337aa|down_6|NZ_CP039190.1_519728_520739_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|694aa|down_7|NZ_CP039190.1_521042_523124_-	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|420aa|down_8|NZ_CP039190.1_523579_524839_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_9|NZ_CP039190.1_524971_525445_+	NA
GCF_009709355.1_ASM970935v1	NZ_CP039191	Piscirickettsia salmonis strain Psal-160 plasmid unnamed1, complete sequence	1	1232-1743	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	7	7	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|111aa|down_4|NZ_CP039191.1_6971_7304_-,NA|354aa|down_8|NZ_CP039191.1_9715_10777_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|340aa|up_0|NZ_CP039191.1_0_1020_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|243aa|down_0|NZ_CP039191.1_2231_2960_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|859aa|down_1|NZ_CP039191.1_3163_5740_+	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|52aa|down_2|NZ_CP039191.1_6034_6190_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_3|NZ_CP039191.1_6213_6942_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|111aa|down_4|NZ_CP039191.1_6971_7304_-	NA	NA|114aa|down_5|NZ_CP039191.1_7374_7716_-	COG5323, COG5323, Uncharacterized conserved protein [Function unknown]	NA|243aa|down_6|NZ_CP039191.1_7871_8600_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|189aa|down_7|NZ_CP039191.1_8806_9373_+	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase	NA|354aa|down_8|NZ_CP039191.1_9715_10777_+	NA	NA|361aa|down_9|NZ_CP039191.1_10806_11889_-	pfam00665, rve, Integrase core domain
