assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009709315.1_ASM970931v1	NZ_CP039181	Piscirickettsia salmonis strain Psal-158 chromosome, complete genome	1	351555-351684	1	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	40	351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638|351601-351638	NZ_CP039182.1_115225-115188|NZ_CP039182.1_104485-104522|NZ_CP039181.1_57067-57030|NZ_CP039181.1_255149-255112|NZ_CP039181.1_782048-782011|NZ_CP039181.1_850618-850581|NZ_CP039181.1_872763-872726|NZ_CP039181.1_1042689-1042652|NZ_CP039181.1_1563921-1563884|NZ_CP039181.1_1612774-1612737|NZ_CP039181.1_1959071-1959034|NZ_CP039181.1_1999592-1999555|NZ_CP039181.1_2070073-2070036|NZ_CP039181.1_2177509-2177472|NZ_CP039181.1_2406045-2406008|NZ_CP039181.1_2523951-2523914|NZ_CP039181.1_2539979-2539942|NZ_CP039181.1_2626933-2626896|NZ_CP039181.1_2928065-2928028|NZ_CP039181.1_46495-46532|NZ_CP039181.1_177366-177403|NZ_CP039181.1_182038-182075|NZ_CP039181.1_224248-224285|NZ_CP039181.1_287795-287832|NZ_CP039181.1_449641-449678|NZ_CP039181.1_519395-519432|NZ_CP039181.1_785274-785311|NZ_CP039181.1_1121823-1121860|NZ_CP039181.1_1308405-1308442|NZ_CP039181.1_1350257-1350294|NZ_CP039181.1_1374392-1374429|NZ_CP039181.1_1529797-1529834|NZ_CP039181.1_1561770-1561807|NZ_CP039181.1_2160860-2160897|NZ_CP039181.1_2302595-2302632|NZ_CP039181.1_2359425-2359462|NZ_CP039181.1_2716991-2717028|NZ_CP039181.1_2914874-2914911|NZ_CP039181.1_2924628-2924665|NZ_CP039181.1_602913-602950	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|485aa|up_9|NZ_CP039181.1_340848_342303_-,NA|73aa|up_8|NZ_CP039181.1_343165_343384_-,NA|65aa|up_5|NZ_CP039181.1_346258_346453_-,NA|105aa|up_1|NZ_CP039181.1_350333_350648_-,NA|97aa|down_0|NZ_CP039181.1_352213_352504_+,NA|233aa|down_1|NZ_CP039181.1_352541_353240_+,NA|99aa|down_2|NZ_CP039181.1_353256_353553_+,NA|282aa|down_3|NZ_CP039181.1_353676_354522_+,NA|128aa|down_4|NZ_CP039181.1_354726_355110_+,NA|192aa|down_5|NZ_CP039181.1_355382_355958_+	NA|485aa|up_9|NZ_CP039181.1_340848_342303_-	NA	NA|73aa|up_8|NZ_CP039181.1_343165_343384_-	NA	NA|85aa|up_7|NZ_CP039181.1_344157_344412_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP039181.1_345134_346121_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP039181.1_346258_346453_-	NA	NA|354aa|up_4|NZ_CP039181.1_347135_348197_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|468aa|up_3|NZ_CP039181.1_348358_349762_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_2|NZ_CP039181.1_349812_350388_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_1|NZ_CP039181.1_350333_350648_-	NA	NA|192aa|up_0|NZ_CP039181.1_350688_351264_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|97aa|down_0|NZ_CP039181.1_352213_352504_+	NA	NA|233aa|down_1|NZ_CP039181.1_352541_353240_+	NA	NA|99aa|down_2|NZ_CP039181.1_353256_353553_+	NA	NA|282aa|down_3|NZ_CP039181.1_353676_354522_+	NA	NA|128aa|down_4|NZ_CP039181.1_354726_355110_+	NA	NA|192aa|down_5|NZ_CP039181.1_355382_355958_+	NA	NA|278aa|down_6|NZ_CP039181.1_356015_356849_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_7|NZ_CP039181.1_356964_358149_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_8|NZ_CP039181.1_358167_359112_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_9|NZ_CP039181.1_359416_360202_+	TIGR03545, TIGR03545, TIGR03545 family protein
GCF_009709315.1_ASM970931v1	NZ_CP039181	Piscirickettsia salmonis strain Psal-158 chromosome, complete genome	2	516511-516631	2	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	AGCTTATCAATGGTTAGTAGCCCTTGGACTTAATCAA	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|61aa|up_1|NZ_CP039181.1_513839_514022_+,NA|47aa|down_0|NZ_CP039181.1_516902_517043_-,NA|141aa|down_1|NZ_CP039181.1_517075_517498_+,NA|137aa|down_2|NZ_CP039181.1_517741_518152_-,NA|71aa|down_5|NZ_CP039181.1_519430_519643_-,NA|158aa|down_9|NZ_CP039181.1_525044_525518_+	NA|243aa|up_9|NZ_CP039181.1_506341_507070_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|195aa|up_8|NZ_CP039181.1_507226_507811_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|228aa|up_7|NZ_CP039181.1_507814_508498_-	pfam02661, Fic, Fic/DOC family	NA|243aa|up_6|NZ_CP039181.1_508979_509708_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|396aa|up_5|NZ_CP039181.1_510039_511227_-	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|242aa|up_4|NZ_CP039181.1_511472_512198_+	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|265aa|up_3|NZ_CP039181.1_512376_513171_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|132aa|up_2|NZ_CP039181.1_513167_513563_-	pfam17775, UPF0225, UPF0225 domain	NA|61aa|up_1|NZ_CP039181.1_513839_514022_+	NA	NA|296aa|up_0|NZ_CP039181.1_514246_515133_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|47aa|down_0|NZ_CP039181.1_516902_517043_-	NA	NA|141aa|down_1|NZ_CP039181.1_517075_517498_+	NA	NA|137aa|down_2|NZ_CP039181.1_517741_518152_-	NA	NA|192aa|down_3|NZ_CP039181.1_518482_519058_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|122aa|down_4|NZ_CP039181.1_519003_519369_-	pfam13384, HTH_23, Homeodomain-like domain	NA|71aa|down_5|NZ_CP039181.1_519430_519643_-	NA	NA|337aa|down_6|NZ_CP039181.1_519801_520812_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|694aa|down_7|NZ_CP039181.1_521115_523197_-	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|420aa|down_8|NZ_CP039181.1_523652_524912_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|158aa|down_9|NZ_CP039181.1_525044_525518_+	NA
GCF_009709315.1_ASM970931v1	NZ_CP039182	Piscirickettsia salmonis strain Psal-158 plasmid unnamed1, complete sequence	1	1232-1743	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	7	7	Orphan	DEDDh,csa3,RT,cas3,DinG	NA,NA|111aa|down_4|NZ_CP039182.1_6971_7304_-,NA|354aa|down_8|NZ_CP039182.1_9715_10777_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|340aa|up_0|NZ_CP039182.1_0_1020_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|243aa|down_0|NZ_CP039182.1_2231_2960_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|859aa|down_1|NZ_CP039182.1_3163_5740_+	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|52aa|down_2|NZ_CP039182.1_6034_6190_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|243aa|down_3|NZ_CP039182.1_6213_6942_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|111aa|down_4|NZ_CP039182.1_6971_7304_-	NA	NA|114aa|down_5|NZ_CP039182.1_7374_7716_-	COG5323, COG5323, Uncharacterized conserved protein [Function unknown]	NA|243aa|down_6|NZ_CP039182.1_7871_8600_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|189aa|down_7|NZ_CP039182.1_8806_9373_+	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase	NA|354aa|down_8|NZ_CP039182.1_9715_10777_+	NA	NA|361aa|down_9|NZ_CP039182.1_10806_11889_-	pfam00665, rve, Integrase core domain
