assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009708895.1_ASM970889v1	NZ_CP038967	Piscirickettsia salmonis strain Psal-068 chromosome, complete genome	1	363106-363235	1	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	59	363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189|363152-363189	NZ_CP038968.1_78301-78264|NZ_CP038968.1_84925-84888|NZ_CP038968.1_55528-55565|NZ_CP038968.1_69447-69484|NZ_CP038968.1_117530-117567|NZ_CP038967.1_155095-155058|NZ_CP038967.1_256591-256554|NZ_CP038967.1_712873-712836|NZ_CP038967.1_768537-768500|NZ_CP038967.1_770689-770652|NZ_CP038967.1_866117-866080|NZ_CP038967.1_909744-909707|NZ_CP038967.1_964654-964617|NZ_CP038967.1_965771-965734|NZ_CP038967.1_992369-992332|NZ_CP038967.1_1025427-1025390|NZ_CP038967.1_1083917-1083880|NZ_CP038967.1_1197490-1197453|NZ_CP038967.1_1221638-1221601|NZ_CP038967.1_1255966-1255929|NZ_CP038967.1_1259472-1259435|NZ_CP038967.1_1573685-1573648|NZ_CP038967.1_1579260-1579223|NZ_CP038967.1_1669824-1669787|NZ_CP038967.1_1684188-1684151|NZ_CP038967.1_1716251-1716214|NZ_CP038967.1_1761081-1761044|NZ_CP038967.1_1918653-1918616|NZ_CP038967.1_2029210-2029173|NZ_CP038967.1_2318139-2318102|NZ_CP038967.1_2680156-2680119|NZ_CP038967.1_46479-46516|NZ_CP038967.1_157365-157402|NZ_CP038967.1_178807-178844|NZ_CP038967.1_183189-183226|NZ_CP038967.1_225981-226018|NZ_CP038967.1_461900-461937|NZ_CP038967.1_547794-547831|NZ_CP038967.1_667305-667342|NZ_CP038967.1_856314-856351|NZ_CP038967.1_893093-893130|NZ_CP038967.1_996665-996702|NZ_CP038967.1_1528675-1528712|NZ_CP038967.1_1799516-1799553|NZ_CP038967.1_1799650-1799687|NZ_CP038967.1_2099864-2099901|NZ_CP038967.1_2109165-2109202|NZ_CP038967.1_2191055-2191092|NZ_CP038967.1_2222934-2222971|NZ_CP038967.1_2231804-2231841|NZ_CP038967.1_2321354-2321391|NZ_CP038967.1_2774594-2774631|NZ_CP038967.1_2778420-2778457|NZ_CP038967.1_2980731-2980768|NZ_CP038967.1_1083783-1083746|NZ_CP038967.1_352899-352936|NZ_CP038967.1_1073738-1073775|NZ_CP038967.1_2223068-2223105|NZ_CP038969.1_5737-5774	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|73aa|up_9|NZ_CP038967.1_353608_353827_-,NA|65aa|up_5|NZ_CP038967.1_357808_358003_-,NA|141aa|up_3|NZ_CP038967.1_359325_359748_+,NA|105aa|up_0|NZ_CP038967.1_361884_362199_-,NA|97aa|down_0|NZ_CP038967.1_363764_364055_+,NA|233aa|down_1|NZ_CP038967.1_364092_364791_+,NA|99aa|down_2|NZ_CP038967.1_364807_365104_+,NA|382aa|down_3|NZ_CP038967.1_365227_366373_+,NA|192aa|down_4|NZ_CP038967.1_366645_367221_+	NA|73aa|up_9|NZ_CP038967.1_353608_353827_-	NA	NA|325aa|up_8|NZ_CP038967.1_354194_355169_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|85aa|up_7|NZ_CP038967.1_355707_355962_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP038967.1_356684_357671_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP038967.1_357808_358003_-	NA	NA|216aa|up_4|NZ_CP038967.1_358685_359333_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|141aa|up_3|NZ_CP038967.1_359325_359748_+	NA	NA|468aa|up_2|NZ_CP038967.1_359909_361313_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP038967.1_361363_361939_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP038967.1_361884_362199_-	NA	NA|97aa|down_0|NZ_CP038967.1_363764_364055_+	NA	NA|233aa|down_1|NZ_CP038967.1_364092_364791_+	NA	NA|99aa|down_2|NZ_CP038967.1_364807_365104_+	NA	NA|382aa|down_3|NZ_CP038967.1_365227_366373_+	NA	NA|192aa|down_4|NZ_CP038967.1_366645_367221_+	NA	NA|278aa|down_5|NZ_CP038967.1_367278_368112_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_6|NZ_CP038967.1_368227_369412_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_7|NZ_CP038967.1_369430_370375_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_8|NZ_CP038967.1_370679_371465_+	TIGR03545, TIGR03545, TIGR03545 family protein	NA|123aa|down_9|NZ_CP038967.1_371582_371951_-	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]
GCF_009708895.1_ASM970889v1	NZ_CP038967	Piscirickettsia salmonis strain Psal-068 chromosome, complete genome	2	2598447-2598567	2	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|158aa|up_8|NZ_CP038967.1_2588965_2589439_-,NA|172aa|up_3|NZ_CP038967.1_2595933_2596449_+,NA|88aa|up_2|NZ_CP038967.1_2596681_2596945_+,NA|137aa|up_1|NZ_CP038967.1_2597213_2597624_+,NA|141aa|up_0|NZ_CP038967.1_2597867_2598290_-,NA	NA|461aa|up_9|NZ_CP038967.1_2587574_2588957_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|158aa|up_8|NZ_CP038967.1_2588965_2589439_-	NA	NA|420aa|up_7|NZ_CP038967.1_2589571_2590831_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_6|NZ_CP038967.1_2591286_2593368_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|325aa|up_5|NZ_CP038967.1_2593956_2594931_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|211aa|up_4|NZ_CP038967.1_2595156_2595789_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|172aa|up_3|NZ_CP038967.1_2595933_2596449_+	NA	NA|88aa|up_2|NZ_CP038967.1_2596681_2596945_+	NA	NA|137aa|up_1|NZ_CP038967.1_2597213_2597624_+	NA	NA|141aa|up_0|NZ_CP038967.1_2597867_2598290_-	NA	NA|155aa|down_0|NZ_CP038967.1_2599944_2600409_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_1|NZ_CP038967.1_2600465_2600945_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP038967.1_2601802_2602198_+	pfam17775, UPF0225, UPF0225 domain	NA|265aa|down_3|NZ_CP038967.1_2602194_2602989_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|242aa|down_4|NZ_CP038967.1_2603167_2603893_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_5|NZ_CP038967.1_2604138_2605326_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|376aa|down_6|NZ_CP038967.1_2605680_2606808_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|181aa|down_7|NZ_CP038967.1_2607138_2607681_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_8|NZ_CP038967.1_2607677_2608364_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_9|NZ_CP038967.1_2608367_2608979_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase
GCF_009708895.1_ASM970889v1	NZ_CP038968	Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence	1	134112-134335	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	3	3	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|68aa|up_9|NZ_CP038968.1_124603_124807_+,NA|57aa|up_8|NZ_CP038968.1_124803_124974_+,NA|86aa|up_5|NZ_CP038968.1_127001_127259_-,NA|57aa|up_3|NZ_CP038968.1_129763_129934_+,NA|563aa|down_2|NZ_CP038968.1_136469_138158_-,NA|163aa|down_4|NZ_CP038968.1_139701_140190_+,NA|243aa|down_5|NZ_CP038968.1_140247_140976_+,NA|327aa|down_6|NZ_CP038968.1_141432_142413_+,NA|60aa|down_8|NZ_CP038968.1_143590_143770_+,NA|99aa|down_9|NZ_CP038968.1_143988_144285_+	NA|68aa|up_9|NZ_CP038968.1_124603_124807_+	NA	NA|57aa|up_8|NZ_CP038968.1_124803_124974_+	NA	NA|361aa|up_7|NZ_CP038968.1_125160_126243_-	pfam00665, rve, Integrase core domain	NA|167aa|up_6|NZ_CP038968.1_126399_126900_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|86aa|up_5|NZ_CP038968.1_127001_127259_-	NA	NA|396aa|up_4|NZ_CP038968.1_127327_128514_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|57aa|up_3|NZ_CP038968.1_129763_129934_+	NA	NA|272aa|up_2|NZ_CP038968.1_130263_131079_+	pfam04986, Y2_Tnp, Putative transposase	NA|197aa|up_1|NZ_CP038968.1_131324_131915_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|340aa|up_0|NZ_CP038968.1_132880_133900_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|56aa|down_0|NZ_CP038968.1_135549_135717_-	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|243aa|down_1|NZ_CP038968.1_135772_136501_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|563aa|down_2|NZ_CP038968.1_136469_138158_-	NA	NA|325aa|down_3|NZ_CP038968.1_138501_139476_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|163aa|down_4|NZ_CP038968.1_139701_140190_+	NA	NA|243aa|down_5|NZ_CP038968.1_140247_140976_+	NA	NA|327aa|down_6|NZ_CP038968.1_141432_142413_+	NA	NA|243aa|down_7|NZ_CP038968.1_142558_143287_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|60aa|down_8|NZ_CP038968.1_143590_143770_+	NA	NA|99aa|down_9|NZ_CP038968.1_143988_144285_+	NA
