assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009708335.1_ASM970833v1	NZ_CP038893	Piscirickettsia salmonis strain Psal-006a chromosome, complete genome	1	361684-361813	1	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	49	361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767|361730-361767	NZ_CP038897.1_30344-30307|NZ_CP038894.1_23924-23887|NZ_CP038893.1_257623-257586|NZ_CP038893.1_338712-338675|NZ_CP038893.1_459729-459692|NZ_CP038893.1_844632-844595|NZ_CP038893.1_935489-935452|NZ_CP038893.1_1012141-1012104|NZ_CP038893.1_1015059-1015022|NZ_CP038893.1_1123597-1123560|NZ_CP038893.1_1137732-1137695|NZ_CP038893.1_1213896-1213859|NZ_CP038893.1_1253816-1253779|NZ_CP038893.1_1446349-1446312|NZ_CP038893.1_2051383-2051346|NZ_CP038893.1_2093334-2093297|NZ_CP038893.1_2161621-2161584|NZ_CP038893.1_2271998-2271961|NZ_CP038893.1_2512296-2512259|NZ_CP038893.1_2710922-2710885|NZ_CP038893.1_3001169-3001132|NZ_CP038893.1_47736-47773|NZ_CP038893.1_178446-178483|NZ_CP038893.1_183118-183155|NZ_CP038893.1_226435-226472|NZ_CP038893.1_461019-461056|NZ_CP038893.1_512685-512722|NZ_CP038893.1_560245-560282|NZ_CP038893.1_847858-847895|NZ_CP038893.1_941406-941443|NZ_CP038893.1_1203851-1203888|NZ_CP038893.1_1241891-1241928|NZ_CP038893.1_1383815-1383852|NZ_CP038893.1_1425602-1425639|NZ_CP038893.1_1450996-1451033|NZ_CP038893.1_1614656-1614693|NZ_CP038893.1_1644424-1644461|NZ_CP038893.1_1769621-1769658|NZ_CP038893.1_1803701-1803738|NZ_CP038893.1_1825788-1825825|NZ_CP038893.1_2255347-2255384|NZ_CP038893.1_2304555-2304592|NZ_CP038893.1_2406605-2406642|NZ_CP038893.1_2464429-2464466|NZ_CP038893.1_2488410-2488447|NZ_CP038893.1_2802556-2802593|NZ_CP038893.1_3005264-3005301|NZ_CP038893.1_3016124-3016161|NZ_CP038893.1_2048822-2048859	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|290aa|up_9|NZ_CP038893.1_350689_351559_-,NA|243aa|up_8|NZ_CP038893.1_351703_352432_-,NA|73aa|up_7|NZ_CP038893.1_353294_353513_-,NA|65aa|up_4|NZ_CP038893.1_356387_356582_-,NA|105aa|up_0|NZ_CP038893.1_360462_360777_-,NA|97aa|down_0|NZ_CP038893.1_362630_362921_+,NA|233aa|down_1|NZ_CP038893.1_362958_363657_+,NA|99aa|down_2|NZ_CP038893.1_363673_363970_+,NA|282aa|down_3|NZ_CP038893.1_364093_364939_+,NA|128aa|down_4|NZ_CP038893.1_365143_365527_+,NA|192aa|down_5|NZ_CP038893.1_365799_366375_+,NA|262aa|down_9|NZ_CP038893.1_369833_370619_+	NA|290aa|up_9|NZ_CP038893.1_350689_351559_-	NA	NA|243aa|up_8|NZ_CP038893.1_351703_352432_-	NA	NA|73aa|up_7|NZ_CP038893.1_353294_353513_-	NA	NA|85aa|up_6|NZ_CP038893.1_354286_354541_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_5|NZ_CP038893.1_355263_356250_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_4|NZ_CP038893.1_356387_356582_-	NA	NA|354aa|up_3|NZ_CP038893.1_357264_358326_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|468aa|up_2|NZ_CP038893.1_358487_359891_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP038893.1_359941_360517_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP038893.1_360462_360777_-	NA	NA|97aa|down_0|NZ_CP038893.1_362630_362921_+	NA	NA|233aa|down_1|NZ_CP038893.1_362958_363657_+	NA	NA|99aa|down_2|NZ_CP038893.1_363673_363970_+	NA	NA|282aa|down_3|NZ_CP038893.1_364093_364939_+	NA	NA|128aa|down_4|NZ_CP038893.1_365143_365527_+	NA	NA|192aa|down_5|NZ_CP038893.1_365799_366375_+	NA	NA|278aa|down_6|NZ_CP038893.1_366432_367266_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_7|NZ_CP038893.1_367381_368566_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_8|NZ_CP038893.1_368584_369529_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_9|NZ_CP038893.1_369833_370619_+	NA
GCF_009708335.1_ASM970833v1	NZ_CP038893	Piscirickettsia salmonis strain Psal-006a chromosome, complete genome	2	2631459-2631579	2	CRISPRCasFinder	no		DEDDh,csa3,RT,cas3,DinG	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|158aa|up_8|NZ_CP038893.1_2622796_2623270_-,NA|172aa|up_4|NZ_CP038893.1_2628657_2629173_+,NA|88aa|up_3|NZ_CP038893.1_2629405_2629669_+,NA|158aa|up_2|NZ_CP038893.1_2629874_2630348_+,NA|141aa|up_1|NZ_CP038893.1_2630591_2631014_-,NA|47aa|up_0|NZ_CP038893.1_2631046_2631187_+,NA	NA|461aa|up_9|NZ_CP038893.1_2621405_2622788_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|158aa|up_8|NZ_CP038893.1_2622796_2623270_-	NA	NA|420aa|up_7|NZ_CP038893.1_2623402_2624662_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_6|NZ_CP038893.1_2625117_2627199_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|337aa|up_5|NZ_CP038893.1_2627502_2628513_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|172aa|up_4|NZ_CP038893.1_2628657_2629173_+	NA	NA|88aa|up_3|NZ_CP038893.1_2629405_2629669_+	NA	NA|158aa|up_2|NZ_CP038893.1_2629874_2630348_+	NA	NA|141aa|up_1|NZ_CP038893.1_2630591_2631014_-	NA	NA|47aa|up_0|NZ_CP038893.1_2631046_2631187_+	NA	NA|155aa|down_0|NZ_CP038893.1_2632956_2633421_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|161aa|down_1|NZ_CP038893.1_2633477_2633960_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP038893.1_2634814_2635210_+	pfam17775, UPF0225, UPF0225 domain	NA|265aa|down_3|NZ_CP038893.1_2635206_2636001_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|242aa|down_4|NZ_CP038893.1_2636179_2636905_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_5|NZ_CP038893.1_2637150_2638338_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|181aa|down_6|NZ_CP038893.1_2638914_2639457_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_7|NZ_CP038893.1_2639453_2640140_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_8|NZ_CP038893.1_2640143_2640755_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase	NA|340aa|down_9|NZ_CP038893.1_2640801_2641821_-	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase
GCF_009708335.1_ASM970833v1	NZ_CP038894	Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence	1	129418-129641	1	CRT	no	RT	RT	Unclear	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	3	3	Orphan	DEDDh,csa3,RT,cas3,DinG	NA|138aa|up_9|NZ_CP038894.1_118247_118661_-,NA|343aa|up_6|NZ_CP038894.1_121335_122364_+,NA|49aa|up_3|NZ_CP038894.1_125104_125251_+,NA|86aa|down_3|NZ_CP038894.1_135903_136161_+,NA|155aa|down_5|NZ_CP038894.1_137264_137729_+	NA|138aa|up_9|NZ_CP038894.1_118247_118661_-	NA	NA|243aa|up_8|NZ_CP038894.1_118758_119487_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|385aa|up_7|NZ_CP038894.1_119553_120707_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|343aa|up_6|NZ_CP038894.1_121335_122364_+	NA	NA|385aa|up_5|NZ_CP038894.1_122643_123797_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	RT|376aa|up_4|NZ_CP038894.1_123756_124884_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|49aa|up_3|NZ_CP038894.1_125104_125251_+	NA	NA|272aa|up_2|NZ_CP038894.1_125580_126396_+	pfam04986, Y2_Tnp, Putative transposase	NA|197aa|up_1|NZ_CP038894.1_126641_127232_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|340aa|up_0|NZ_CP038894.1_128186_129206_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|243aa|down_0|NZ_CP038894.1_130129_130858_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|859aa|down_1|NZ_CP038894.1_131061_133638_+	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23	NA|326aa|down_2|NZ_CP038894.1_133754_134732_-	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|86aa|down_3|NZ_CP038894.1_135903_136161_+	NA	NA|326aa|down_4|NZ_CP038894.1_136179_137157_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|155aa|down_5|NZ_CP038894.1_137264_137729_+	NA	NA|57aa|down_6|NZ_CP038894.1_138067_138238_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|243aa|down_7|NZ_CP038894.1_139908_140637_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|453aa|down_8|NZ_CP038894.1_140820_142179_-	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins	NA|189aa|down_9|NZ_CP038894.1_142268_142835_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain
