assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009708255.1_ASM970825v1	NZ_CP038876	Piscirickettsia salmonis strain Psal-002 chromosome, complete genome	1	363130-363259	1	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	ATAACTGTAAGGAGAAGGCATCGTTTTTCCTTATTGTATTTTTTAA	46	1	59	363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213|363176-363213	NZ_CP038877.1_78248-78211|NZ_CP038877.1_84872-84835|NZ_CP038877.1_55475-55512|NZ_CP038877.1_69394-69431|NZ_CP038877.1_120528-120565|NZ_CP038876.1_155095-155058|NZ_CP038876.1_256591-256554|NZ_CP038876.1_739838-739801|NZ_CP038876.1_795514-795477|NZ_CP038876.1_797666-797629|NZ_CP038876.1_893094-893057|NZ_CP038876.1_936721-936684|NZ_CP038876.1_991631-991594|NZ_CP038876.1_992748-992711|NZ_CP038876.1_1019346-1019309|NZ_CP038876.1_1052404-1052367|NZ_CP038876.1_1110894-1110857|NZ_CP038876.1_1224468-1224431|NZ_CP038876.1_1248616-1248579|NZ_CP038876.1_1282944-1282907|NZ_CP038876.1_1286450-1286413|NZ_CP038876.1_1600665-1600628|NZ_CP038876.1_1606240-1606203|NZ_CP038876.1_1698039-1698002|NZ_CP038876.1_1712403-1712366|NZ_CP038876.1_1744466-1744429|NZ_CP038876.1_1789280-1789243|NZ_CP038876.1_1946853-1946816|NZ_CP038876.1_2057123-2057086|NZ_CP038876.1_2344818-2344781|NZ_CP038876.1_2707831-2707794|NZ_CP038876.1_46479-46516|NZ_CP038876.1_157365-157402|NZ_CP038876.1_178807-178844|NZ_CP038876.1_183189-183226|NZ_CP038876.1_225981-226018|NZ_CP038876.1_461925-461962|NZ_CP038876.1_574759-574796|NZ_CP038876.1_694270-694307|NZ_CP038876.1_883291-883328|NZ_CP038876.1_920070-920107|NZ_CP038876.1_1023642-1023679|NZ_CP038876.1_1555655-1555692|NZ_CP038876.1_1827715-1827752|NZ_CP038876.1_1827849-1827886|NZ_CP038876.1_2126543-2126580|NZ_CP038876.1_2135844-2135881|NZ_CP038876.1_2217734-2217771|NZ_CP038876.1_2249613-2249650|NZ_CP038876.1_2258483-2258520|NZ_CP038876.1_2348033-2348070|NZ_CP038876.1_2802269-2802306|NZ_CP038876.1_2806095-2806132|NZ_CP038876.1_3009641-3009678|NZ_CP038876.1_1110760-1110723|NZ_CP038876.1_352923-352960|NZ_CP038876.1_1100715-1100752|NZ_CP038876.1_2249747-2249784|NZ_CP038878.1_5737-5774	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|73aa|up_9|NZ_CP038876.1_353632_353851_-,NA|65aa|up_5|NZ_CP038876.1_357832_358027_-,NA|141aa|up_3|NZ_CP038876.1_359349_359772_+,NA|105aa|up_0|NZ_CP038876.1_361908_362223_-,NA|97aa|down_0|NZ_CP038876.1_363788_364079_+,NA|233aa|down_1|NZ_CP038876.1_364116_364815_+,NA|99aa|down_2|NZ_CP038876.1_364831_365128_+,NA|382aa|down_3|NZ_CP038876.1_365251_366397_+,NA|192aa|down_4|NZ_CP038876.1_366669_367245_+	NA|73aa|up_9|NZ_CP038876.1_353632_353851_-	NA	NA|325aa|up_8|NZ_CP038876.1_354218_355193_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|85aa|up_7|NZ_CP038876.1_355731_355986_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|329aa|up_6|NZ_CP038876.1_356708_357695_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|65aa|up_5|NZ_CP038876.1_357832_358027_-	NA	NA|216aa|up_4|NZ_CP038876.1_358709_359357_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|141aa|up_3|NZ_CP038876.1_359349_359772_+	NA	NA|468aa|up_2|NZ_CP038876.1_359933_361337_+	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like	NA|192aa|up_1|NZ_CP038876.1_361387_361963_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|105aa|up_0|NZ_CP038876.1_361908_362223_-	NA	NA|97aa|down_0|NZ_CP038876.1_363788_364079_+	NA	NA|233aa|down_1|NZ_CP038876.1_364116_364815_+	NA	NA|99aa|down_2|NZ_CP038876.1_364831_365128_+	NA	NA|382aa|down_3|NZ_CP038876.1_365251_366397_+	NA	NA|192aa|down_4|NZ_CP038876.1_366669_367245_+	NA	NA|278aa|down_5|NZ_CP038876.1_367302_368136_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|395aa|down_6|NZ_CP038876.1_368251_369436_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|315aa|down_7|NZ_CP038876.1_369454_370399_-	PRK10260, PRK10260, L,D-transpeptidase; Provisional	NA|262aa|down_8|NZ_CP038876.1_370703_371489_+	TIGR03545, TIGR03545, TIGR03545 family protein	NA|123aa|down_9|NZ_CP038876.1_371606_371975_-	COG3603, COG3603, Uncharacterized conserved protein [Function unknown]
GCF_009708255.1_ASM970825v1	NZ_CP038876	Piscirickettsia salmonis strain Psal-002 chromosome, complete genome	2	2626122-2626242	2	CRISPRCasFinder	no		DEDDh,RT,cas3,DinG,csa3	Orphan	TTGATTAAGTCCAAGGGCTGCTAACCATTGATAAGCT	37	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|158aa|up_7|NZ_CP038876.1_2617747_2618221_-,NA|172aa|up_3|NZ_CP038876.1_2623608_2624124_+,NA|88aa|up_2|NZ_CP038876.1_2624356_2624620_+,NA|137aa|up_1|NZ_CP038876.1_2624888_2625299_+,NA|141aa|up_0|NZ_CP038876.1_2625542_2625965_-,NA	NA|205aa|up_9|NZ_CP038876.1_2615749_2616364_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|461aa|up_8|NZ_CP038876.1_2616356_2617739_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|158aa|up_7|NZ_CP038876.1_2617747_2618221_-	NA	NA|420aa|up_6|NZ_CP038876.1_2618353_2619613_+	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|694aa|up_5|NZ_CP038876.1_2620068_2622150_+	cd14016, STKc_CK1, Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1	NA|337aa|up_4|NZ_CP038876.1_2622453_2623464_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|172aa|up_3|NZ_CP038876.1_2623608_2624124_+	NA	NA|88aa|up_2|NZ_CP038876.1_2624356_2624620_+	NA	NA|137aa|up_1|NZ_CP038876.1_2624888_2625299_+	NA	NA|141aa|up_0|NZ_CP038876.1_2625542_2625965_-	NA	NA|155aa|down_0|NZ_CP038876.1_2627619_2628084_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_1|NZ_CP038876.1_2628140_2628620_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|132aa|down_2|NZ_CP038876.1_2629477_2629873_+	pfam17775, UPF0225, UPF0225 domain	NA|265aa|down_3|NZ_CP038876.1_2629869_2630664_-	pfam01863, DUF45, Protein of unknown function DUF45	NA|242aa|down_4|NZ_CP038876.1_2630842_2631568_-	cd14843, D-Ala-D-Ala_dipeptidase_like, D-Ala-D-Ala dipeptidase, includes uncharacterized enzymes	NA|396aa|down_5|NZ_CP038876.1_2631813_2633001_+	PRK09550, mtnK, methylthioribose kinase; Reviewed	NA|376aa|down_6|NZ_CP038876.1_2633355_2634483_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|181aa|down_7|NZ_CP038876.1_2634813_2635356_-	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]	NA|229aa|down_8|NZ_CP038876.1_2635352_2636039_-	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv	NA|204aa|down_9|NZ_CP038876.1_2636042_2636654_-	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase
GCF_009708255.1_ASM970825v1	NZ_CP038877	Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence	1	137110-137333	1	CRT	no		RT	Orphan	AAACGGAACACAAACGGAACACAAA	25	0	0	NA	NA	NA	3	3	Orphan	DEDDh,RT,cas3,DinG,csa3	NA|68aa|up_9|NZ_CP038877.1_127601_127805_+,NA|57aa|up_8|NZ_CP038877.1_127801_127972_+,NA|86aa|up_5|NZ_CP038877.1_129999_130257_-,NA|57aa|up_3|NZ_CP038877.1_132761_132932_+,NA|563aa|down_2|NZ_CP038877.1_139467_141156_-,NA|163aa|down_4|NZ_CP038877.1_142699_143188_+,NA|243aa|down_5|NZ_CP038877.1_143245_143974_+,NA|327aa|down_6|NZ_CP038877.1_144430_145411_+,NA|60aa|down_8|NZ_CP038877.1_146588_146768_+,NA|99aa|down_9|NZ_CP038877.1_146986_147283_+	NA|68aa|up_9|NZ_CP038877.1_127601_127805_+	NA	NA|57aa|up_8|NZ_CP038877.1_127801_127972_+	NA	NA|361aa|up_7|NZ_CP038877.1_128158_129241_-	pfam00665, rve, Integrase core domain	NA|167aa|up_6|NZ_CP038877.1_129397_129898_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|86aa|up_5|NZ_CP038877.1_129999_130257_-	NA	NA|396aa|up_4|NZ_CP038877.1_130325_131512_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|57aa|up_3|NZ_CP038877.1_132761_132932_+	NA	NA|272aa|up_2|NZ_CP038877.1_133261_134077_+	pfam04986, Y2_Tnp, Putative transposase	NA|197aa|up_1|NZ_CP038877.1_134322_134913_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|340aa|up_0|NZ_CP038877.1_135878_136898_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|56aa|down_0|NZ_CP038877.1_138547_138715_-	PRK05771, PRK05771, V-type ATP synthase subunit I; Validated	NA|243aa|down_1|NZ_CP038877.1_138770_139499_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|563aa|down_2|NZ_CP038877.1_139467_141156_-	NA	NA|325aa|down_3|NZ_CP038877.1_141499_142474_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|163aa|down_4|NZ_CP038877.1_142699_143188_+	NA	NA|243aa|down_5|NZ_CP038877.1_143245_143974_+	NA	NA|327aa|down_6|NZ_CP038877.1_144430_145411_+	NA	NA|243aa|down_7|NZ_CP038877.1_145556_146285_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|60aa|down_8|NZ_CP038877.1_146588_146768_+	NA	NA|99aa|down_9|NZ_CP038877.1_146986_147283_+	NA
