The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	266901	311365	3029645	transposase,tRNA	Anoxybacillus_phage(28.57%)	42	NA	NA
WP_142423395.1|266901_267861_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	26.8	2.2e-10
WP_010721770.1|268400_269324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154494725.1|269506_272182_+	DUF927 domain-containing protein	NA	A0A2H4J8K1	uncultured_Caudovirales_phage	28.0	2.5e-24
WP_016853136.1|272363_272603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110300553.1|272618_273992_+	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	23.8	4.6e-14
WP_110300554.1|273995_275633_+	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	27.9	1.5e-40
WP_098188882.1|275795_276728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002313258.1|276852_277110_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
WP_002317125.1|277341_277746_+	restriction endonuclease subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	41.4	4.7e-15
WP_002323457.1|277764_280422_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002312631.1|280493_280970_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002312633.1|280983_281772_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002349742.1|281764_282571_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002312636.1|282589_282985_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002317128.1|282986_284108_+	DUF2961 domain-containing protein	NA	NA	NA	NA	NA
WP_002312639.1|284127_284997_+	ROK family protein	NA	NA	NA	NA	NA
WP_002296569.1|285197_285707_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	34.8	2.8e-17
WP_002296570.1|285806_286457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002291914.1|286907_287846_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002291912.1|287858_288911_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002296392.1|289176_289812_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_002296391.1|290002_290794_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_002326839.1|291273_292182_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002295755.1|292237_292735_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002340421.1|292771_293455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296262.1|293801_294068_+	DUF960 domain-containing protein	NA	NA	NA	NA	NA
WP_002296261.1|294094_294394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296259.1|294567_295119_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_002296258.1|295264_295558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048946666.1|295550_295847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296256.1|295921_296920_+	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
WP_000997695.1|297055_298234_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_000222572.1|298357_299311_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002294735.1|299409_300126_+	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
WP_002296623.1|300324_301620_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_025478783.1|301666_303715_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_002294732.1|304924_306166_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_002294730.1|306312_306948_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_002294728.1|307138_307879_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002296909.1|308023_309661_-	membrane protein	NA	NA	NA	NA	NA
WP_002321965.1|309626_310148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|310186_311365_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	590224	642471	3029645	transposase,protease,integrase	Bacillus_phage(25.0%)	39	590202:590219	615094:615111
590202:590219	attL	TGACCAGATTTTGACCAG	NA	NA	NA	NA
WP_002287705.1|590224_591367_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	34.8	3.3e-58
WP_002287709.1|591405_592140_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287723.1|592371_592647_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_048946547.1|592744_594742_+	hypothetical protein	NA	A0A1Z1LZK7	Bacillus_phage	24.4	5.5e-24
WP_002301912.1|594817_595153_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_048946548.1|595531_595894_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_048946549.1|595939_596266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298390.1|597108_598932_+	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA	NA
WP_002298389.1|598945_600355_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	27.6	3.2e-42
WP_002298387.1|600372_601209_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002317770.1|601273_602056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094850654.1|602459_603585_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	54.1	2.3e-75
WP_002297848.1|604937_605138_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002297850.1|605213_605411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297851.1|605707_607255_-	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	S4VPC4	Pandoravirus	25.7	4.6e-10
WP_002297853.1|607338_608142_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_002297855.1|608144_608927_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_002297856.1|608923_609703_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_002297857.1|609674_610466_-	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	1.3e-21
WP_002297858.1|610526_611456_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002297859.1|611650_612334_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002340328.1|612494_613538_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002340332.1|615477_616656_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
615094:615111	attR	TGACCAGATTTTGACCAG	NA	NA	NA	NA
WP_002295743.1|616876_617785_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002321318.1|617913_618513_+	DUF1819 family protein	NA	NA	NA	NA	NA
WP_002321317.1|618512_619088_+	DUF1788 domain-containing protein	NA	NA	NA	NA	NA
WP_002344971.1|619112_622784_+	BREX system P-loop protein BrxC	NA	NA	NA	NA	NA
WP_002340336.1|622847_626480_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA	NA
WP_002321314.1|626595_629118_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA	NA
WP_002321313.1|629235_631269_+|protease	protease Lon-related BREX system protein BrxL	protease	NA	NA	NA	NA
WP_002321312.1|631665_632331_-	helix-turn-helix domain-containing protein	NA	A0A2I7SCV6	Paenibacillus_phage	47.1	2.2e-06
WP_123838299.1|632888_633305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094850595.1|633722_634493_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_002340338.1|634496_635135_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	32.8	3.1e-13
WP_002288548.1|635511_636423_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_002321308.1|636639_637077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321307.1|637171_638056_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_129983702.1|638277_640851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296127.1|640923_642471_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	773748	782220	3029645		Streptococcus_phage(66.67%)	9	NA	NA
WP_002294039.1|773748_774393_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|774407_774737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288071.1|774750_775689_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002288073.1|775724_776549_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|776541_776889_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288078.1|776957_777830_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002294035.1|777938_779060_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|779113_779716_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|780030_782220_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
>prophage 4
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	801304	837710	3029645	protease,holin,tail,head,capsid,portal,transposase,integrase,terminase	Enterococcus_phage(32.14%)	51	801921:801956	841235:841270
WP_002289451.1|801304_801649_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_002289452.1|801661_801955_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
801921:801956	attL	AAGTGTCTGTTTATCCAGTAGCTCAAGAAGCTTAAT	NA	NA	NA	NA
WP_002301539.1|802047_803196_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	40.1	3.0e-67
WP_002305409.1|803207_803519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321996.1|803571_803967_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002305405.1|804002_804347_-	helix-turn-helix transcriptional regulator	NA	A0A126GGL0	Streptococcus_phage	52.6	1.2e-24
WP_002349274.1|804647_804869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305403.1|804995_805772_+	hypothetical protein	NA	B2ZYU5	Staphylococcus_phage	54.8	2.8e-72
WP_002305401.1|805768_805963_+	helix-turn-helix transcriptional regulator	NA	D2IZW2	Enterococcus_phage	50.9	1.2e-08
WP_002349273.1|805964_806249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305400.1|806269_806458_+	hypothetical protein	NA	D2IZW5	Enterococcus_phage	60.3	7.4e-08
WP_002305399.1|806783_807023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305398.1|807028_807715_+	hypothetical protein	NA	C9E2N1	Enterococcus_phage	71.4	2.6e-90
WP_002305397.1|807717_808548_+	replication protein	NA	C9E2N2	Enterococcus_phage	43.9	1.5e-52
WP_002305396.1|808564_809416_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	28.7	6.2e-25
WP_002305394.1|809412_809772_+	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	48.3	3.1e-18
WP_002290675.1|809786_809948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305393.1|809944_810250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286550.1|810249_810606_+	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	37.4	3.1e-10
WP_002296604.1|810565_810811_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305391.1|810995_811463_+	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	28.5	2.4e-07
WP_002349267.1|811737_811974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305389.1|811997_812339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020944850.1|812331_812511_-	YegP family protein	NA	NA	NA	NA	NA
WP_002305387.1|812732_813380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305386.1|813639_813984_+	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	58.1	1.0e-26
WP_002296599.1|813988_814270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286538.1|814372_814687_+|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002286533.1|814664_816359_+|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286530.1|816378_817557_+|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286527.1|817519_818206_+|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_002286525.1|818205_819366_+|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.1	1.8e-99
WP_154494729.1|819375_820242_+	hypothetical protein	NA	D2IYX3	Enterococcus_phage	73.5	4.4e-127
WP_002286523.1|820238_820550_+	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	42.1	6.3e-12
WP_002286522.1|820539_820893_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_002296598.1|820882_821284_+	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	33.3	1.1e-13
WP_002286516.1|821276_821681_+	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002297404.1|821816_823067_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002305379.1|823475_824081_+	hypothetical protein	NA	Q8W5Z9	Listeria_phage	41.6	1.1e-33
WP_002286510.1|824100_824463_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305377.1|824465_824648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305374.1|824664_828084_+|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	41.5	8.7e-78
WP_002305373.1|828134_828872_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002305372.1|828881_831173_+	hypothetical protein	NA	A0A1D3SNL1	Enterococcus_phage	30.2	1.7e-90
WP_002305370.1|831196_833287_+	hypothetical protein	NA	A0A249XZH9	Enterococcus_phage	49.6	9.6e-88
WP_002286491.1|833449_833896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296594.1|833897_834035_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002318262.1|834072_834366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286683.1|834362_834587_+|holin	holin	holin	NA	NA	NA	NA
WP_002286484.1|834583_835609_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	61.3	2.1e-64
WP_087046766.1|836548_837710_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
841235:841270	attR	AAGTGTCTGTTTATCCAGTAGCTCAAGAAGCTTAAT	NA	NA	NA	NA
>prophage 5
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	874543	979408	3029645	protease,holin,tail,capsid,tRNA,portal,terminase,plate,transposase,integrase,head	Streptococcus_phage(13.04%)	120	867815:867830	968575:968593
867815:867830	attL	GAAAATGGAACAGTAT	NA	NA	NA	NA
WP_002286621.1|874543_877342_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
867815:867830	attL	GAAAATGGAACAGTAT	NA	NA	NA	NA
WP_002286618.1|877390_878917_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
WP_002286616.1|878931_879579_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286678.1|879762_880092_-	DUF4828 domain-containing protein	NA	NA	NA	NA	NA
WP_002286614.1|880268_880997_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_002286612.1|881012_882026_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002286608.1|882025_883303_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
WP_002286607.1|883365_886068_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286606.1|886219_886537_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002286604.1|886566_886887_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002371581.1|886994_888455_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002286598.1|888522_888744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286596.1|888774_888957_+	DUF3188 domain-containing protein	NA	NA	NA	NA	NA
WP_002286592.1|888956_889370_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
WP_002286589.1|889492_890674_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002286587.1|891204_892344_-|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	47.1	2.6e-95
WP_002296617.1|892642_893278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296616.1|893390_894026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303013.1|894059_894521_-	DUF4429 domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	34.8	4.5e-06
WP_002296613.1|894650_895082_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002296612.1|895099_895420_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	40.2	2.0e-13
WP_002290310.1|895718_896495_+	phage antirepressor protein	NA	A0A1Q1PVU2	Staphylococcus_phage	53.8	1.1e-73
WP_002296611.1|896509_896713_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002286573.1|896728_897067_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002296610.1|897053_897233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286568.1|897275_897746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286562.1|897832_898531_+	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	34.6	1.7e-25
WP_002286559.1|898708_899050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286557.1|899042_899714_+	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.4	4.2e-29
WP_058825536.1|899719_900412_+	hypothetical protein	NA	C9E2N1	Enterococcus_phage	69.1	3.2e-88
WP_002286552.1|900408_901158_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	54.0	1.7e-31
WP_002304429.1|901169_901439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303016.1|901601_901901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303017.1|901900_902203_+	hypothetical protein	NA	D2IZY1	Enterococcus_phage	70.7	2.8e-33
WP_002303018.1|902242_902608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002369144.1|903234_903417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002347162.1|903429_903624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303022.1|903656_903869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304431.1|903993_904197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303024.1|904193_904466_+	DUF3850 domain-containing protein	NA	C9E2N9	Enterococcus_phage	61.6	5.5e-20
WP_002303025.1|904466_904652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_123838300.1|904638_904986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303026.1|904945_905422_+	DUF1492 domain-containing protein	NA	A0A2H4JFW6	uncultured_Caudovirales_phage	50.8	2.2e-27
WP_002349221.1|905567_906296_-	DUF4145 domain-containing protein	NA	A0A1X9I5M7	Streptococcus_phage	52.4	1.2e-58
WP_002303029.1|906343_906622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303030.1|906623_907010_+	hypothetical protein	NA	A0A1B1P7N8	Bacillus_phage	36.7	1.9e-10
WP_002304435.1|907006_907387_+	HNH endonuclease	NA	A0A1B1P7N1	Bacillus_phage	64.0	4.7e-41
WP_002303032.1|907498_907951_+	hypothetical protein	NA	A0A2H4JFK0	uncultured_Caudovirales_phage	66.2	6.8e-47
WP_002303033.1|907947_909675_+|terminase	terminase large subunit	terminase	A0A2H4JDG5	uncultured_Caudovirales_phage	73.3	6.9e-265
908616:908631	attR	GAAAATGGAACAGTAT	NA	NA	NA	NA
WP_002303034.1|909696_910926_+|portal	phage portal protein	portal	A0A2H4J9C7	uncultured_Caudovirales_phage	65.0	1.7e-145
908616:908631	attR	GAAAATGGAACAGTAT	NA	NA	NA	NA
WP_002349220.1|910891_911467_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1B2APW1	Phage_Wrath	71.7	3.6e-69
WP_002303037.1|911479_912844_+|capsid	phage major capsid protein	capsid	A0A1B2APY9	Phage_Wrath	69.1	2.2e-125
WP_002301326.1|912845_913124_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1C8E967	Bacillus_phage	62.7	3.5e-22
WP_002303041.1|913104_913431_+|head	phage head closure protein	head	A0A0N7IRA3	Lactobacillus_phage	53.4	2.9e-23
WP_002303043.1|913420_913759_+	hypothetical protein	NA	A0A1B1P7P2	Bacillus_phage	45.9	9.6e-22
WP_002303045.1|913748_914114_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_002303047.1|914120_914747_+|tail	tail protein	tail	A0A2H4JGN2	uncultured_Caudovirales_phage	34.5	5.7e-28
WP_002303049.1|914746_915211_+	hypothetical protein	NA	A0A2H4J956	uncultured_Caudovirales_phage	38.9	1.4e-15
WP_002303051.1|915405_917715_+|tail	phage tail tape measure protein	tail	Q8W5Z7	Listeria_phage	50.1	5.5e-84
WP_002349218.1|917726_918431_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002304441.1|918427_921187_+	CHAP domain-containing protein	NA	D7RWE0	Brochothrix_phage	55.2	1.4e-49
WP_002371974.1|921199_922108_+|plate	phage baseplate upper protein	plate	A0A1P8BLW0	Lactococcus_phage	25.2	7.8e-10
WP_002303523.1|922107_922725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049140195.1|922728_923178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305897.1|923177_923672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002347165.1|923685_924117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303475.1|924118_924256_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002303476.1|924292_924586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286683.1|924582_924807_+|holin	holin	holin	NA	NA	NA	NA
WP_060797500.1|924803_925823_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.1	2.4e-60
WP_002302747.1|926599_926899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002302745.1|926904_927135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286470.1|927384_927585_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	75.7	4.6e-08
WP_086953915.1|929018_930358_-|transposase	IS3-like element ISEnfa3 family transposase	transposase	A0A1B1P773	Bacillus_phage	52.7	2.6e-78
WP_002286469.1|930830_932063_-	aminopeptidase	NA	NA	NA	NA	NA
WP_002286467.1|932317_932887_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002286465.1|933064_933505_-	flavodoxin	NA	NA	NA	NA	NA
WP_002294533.1|933662_934427_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002286461.1|934458_935382_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_008788617.1|935606_935846_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_022278534.1|935850_936270_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_022278535.1|936496_937735_-	MFS transporter	NA	NA	NA	NA	NA
WP_022278536.1|937841_938477_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008788621.1|938818_939454_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_153274509.1|939596_939749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021391143.1|939965_941108_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	36.2	4.8e-65
WP_032518109.1|941100_941307_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	88.9	3.9e-26
WP_021391141.1|941385_942579_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	64.1	8.4e-145
WP_002286457.1|942783_943923_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002286455.1|943915_944716_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286453.1|944715_945543_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002321540.1|945520_946255_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002286449.1|946354_947221_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|947234_947807_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002294532.1|947828_948857_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.9	6.4e-69
WP_002286428.1|948954_949806_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.7e-38
WP_002302719.1|949839_951873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042957143.1|951916_953197_+	EpaQ family protein	NA	NA	NA	NA	NA
WP_002289081.1|953406_954213_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002289079.1|954224_955445_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.1e-11
WP_002289078.1|955434_957021_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002289076.1|957059_959198_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002289074.1|959565_960549_-	serine hydrolase	NA	NA	NA	NA	NA
WP_002289073.1|960926_962318_+	sugar transferase	NA	NA	NA	NA	NA
WP_002289071.1|962333_963374_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	35.3	2.4e-07
WP_002289069.1|963392_964478_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_002289068.1|964510_965473_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_002292877.1|965465_966893_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_002302730.1|966894_967965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002292875.1|967951_969373_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002289359.1|969385_970393_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.9	1.2e-40
WP_002292874.1|970404_971409_+	N-acetylneuraminate synthase	NA	NA	NA	NA	NA
WP_002289362.1|971405_972554_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA	NA
WP_002289363.1|972526_973204_+	acetyltransferase	NA	NA	NA	NA	NA
WP_002326811.1|973193_974336_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A2K9L0G1	Tupanvirus	27.9	2.4e-24
WP_002289366.1|974348_975326_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002289368.1|975325_976234_+	dehydrogenase	NA	NA	NA	NA	NA
WP_002289370.1|976234_976987_+	acylneuraminate cytidylyltransferase family protein	NA	NA	NA	NA	NA
WP_002289372.1|976991_977939_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	37.7	2.8e-50
WP_060809400.1|978112_979408_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.2	1.5e-54
>prophage 6
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	1256208	1265751	3029645		unidentified_phage(16.67%)	9	NA	NA
WP_002348948.1|1256208_1257597_-	group II intron reverse transcriptase/maturase	NA	H7BVW2	unidentified_phage	26.0	7.0e-10
WP_002297115.1|1258165_1258543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288021.1|1258798_1259527_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002295474.1|1259526_1259781_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002288017.1|1259782_1260454_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002288015.1|1260454_1262677_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	1.9e-150
WP_002288013.1|1262661_1264101_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.3e-53
WP_002378443.1|1264132_1265176_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.7	2.7e-62
WP_002288010.1|1265172_1265751_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	1.3e-26
>prophage 7
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	1541475	1591687	3029645	transposase,protease	Synechococcus_phage(21.43%)	59	NA	NA
WP_002287525.1|1541475_1542624_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|1542640_1543045_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002295138.1|1544161_1544635_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_002295139.1|1544643_1544871_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002295142.1|1545506_1545878_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002291278.1|1546133_1546376_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002296679.1|1546407_1547310_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002291274.1|1547322_1547511_-	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_002296677.1|1547524_1548088_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_002296675.1|1548125_1549019_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.0	8.9e-59
WP_002296674.1|1549096_1550035_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002296672.1|1550068_1550419_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002296671.1|1550451_1551354_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_002296670.1|1551346_1552204_-	glycosyltransferase family 8 protein	NA	A0ZYL4	Archaeal_BJ1_virus	27.1	1.3e-19
WP_002296669.1|1552537_1553347_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002296667.1|1553386_1553884_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002321681.1|1554528_1554852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296665.1|1555015_1555270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296663.1|1555339_1555585_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002296662.1|1555660_1556026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303842.1|1556086_1556650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297218.1|1557298_1558594_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002293303.1|1558739_1558940_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	77.3	3.9e-23
WP_002296656.1|1559691_1560405_-	HAD family phosphatase	NA	A0A1D8KPI1	Synechococcus_phage	23.0	5.4e-06
WP_002296654.1|1560397_1561483_-	mannonate dehydratase	NA	NA	NA	NA	NA
WP_002296653.1|1561499_1561943_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002321678.1|1561976_1562330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296650.1|1562441_1562843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296648.1|1562879_1563389_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002296647.1|1563410_1564268_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002296646.1|1564285_1565119_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002296645.1|1565132_1565930_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002321677.1|1565962_1566247_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002296641.1|1566243_1567245_-	2-hydroxyacid dehydrogenase	NA	M1H9J0	Paramecium_bursaria_Chlorella_virus	29.0	2.8e-24
WP_154494737.1|1567246_1568149_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D8KGX1	Synechococcus_phage	35.0	5.7e-53
WP_002296639.1|1568312_1569161_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296638.1|1569806_1570013_+	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
WP_002296637.1|1570214_1571216_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	31.8	2.5e-09
WP_002296634.1|1573300_1573807_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002296633.1|1573966_1574407_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
WP_002296632.1|1574432_1575590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296631.1|1575592_1575949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296629.1|1576246_1577221_-	LPXTG-anchored fibrinogen/nidogen-binding adhesin SgrA	NA	NA	NA	NA	NA
WP_002296628.1|1577416_1578256_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002296627.1|1578440_1579328_+	rotamase	NA	NA	NA	NA	NA
WP_002311093.1|1579921_1580617_-	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.5	1.0e-22
WP_002296624.1|1580600_1580999_-	PTS sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002297404.1|1581407_1582658_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002296760.1|1582799_1583795_-	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA	NA
WP_002289423.1|1583812_1584367_-	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002289422.1|1584354_1584846_-	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289421.1|1584838_1586707_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002289420.1|1586725_1587526_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.6e-09
WP_002289418.1|1587749_1587965_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002303864.1|1588103_1588589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289415.1|1589044_1589458_+	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_002322258.1|1589594_1589855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321532.1|1589972_1590263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1590508_1591687_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	1633069	1706680	3029645	transposase,tRNA,protease	Streptococcus_phage(21.05%)	60	NA	NA
WP_002287525.1|1633069_1634218_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|1634234_1634639_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002289130.1|1635033_1635921_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002289132.1|1635917_1636787_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002289133.1|1636923_1638210_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002289134.1|1638482_1639061_+	response regulator	NA	NA	NA	NA	NA
WP_002289135.1|1639060_1639990_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002289136.1|1639986_1641723_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.6	5.0e-21
WP_002289137.1|1641785_1642622_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_002289138.1|1642618_1643128_-	shikimate kinase	NA	NA	NA	NA	NA
WP_002289139.1|1643120_1644416_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_002289140.1|1644428_1645520_-	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_002289142.1|1645536_1646703_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	35.3	1.6e-39
WP_002289143.1|1646704_1647769_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_002289144.1|1647801_1648824_-	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA	NA
WP_002289516.1|1649482_1650457_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_002289518.1|1650437_1652321_-	glycoside hydrolase family 2	NA	L0N6M2	Herpes_simplex_virus	34.4	1.1e-98
WP_002296412.1|1652338_1654564_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_002296414.1|1654678_1655713_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296415.1|1655779_1656793_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	23.3	7.9e-11
WP_154494751.1|1656870_1657059_-	methionine synthase	NA	A0A218MNE0	uncultured_virus	50.9	5.7e-08
WP_002295229.1|1657498_1657627_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002288467.1|1657629_1659003_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	55.9	7.1e-140
WP_002288471.1|1659113_1660169_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.4	3.2e-15
WP_002288473.1|1660178_1661609_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_002288475.1|1661605_1663078_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002288477.1|1663077_1663383_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_002303894.1|1663488_1665525_-	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	37.1	4.8e-100
WP_002296417.1|1665541_1667776_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	40.3	3.3e-126
WP_002288482.1|1667930_1669490_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_086953915.1|1670731_1672071_-|transposase	IS3-like element ISEnfa3 family transposase	transposase	A0A1B1P773	Bacillus_phage	52.7	2.6e-78
WP_002288483.1|1672541_1674473_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002288484.1|1674490_1675405_-	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_154494738.1|1675401_1676154_-	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002294422.1|1676312_1676522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288491.1|1678224_1678812_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_002288492.1|1678894_1680145_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.8	1.1e-147
WP_002292069.1|1680391_1681681_-	trigger factor	NA	NA	NA	NA	NA
WP_002296313.1|1681834_1682767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296311.1|1682923_1683583_-	RDD family protein	NA	NA	NA	NA	NA
WP_002296309.1|1683585_1684611_-	signal peptide peptidase SppA	NA	A0A2I6UH21	Salinibacter_virus	33.1	3.2e-20
WP_002287827.1|1684623_1684914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287825.1|1685322_1687128_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.8	9.8e-97
WP_002287824.1|1687199_1688555_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_002287822.1|1688578_1689748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287821.1|1689744_1690632_-	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_002287819.1|1690820_1694513_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_002287818.1|1694711_1695233_+	DsbA family protein	NA	NA	NA	NA	NA
WP_002287817.1|1695931_1696489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321468.1|1696667_1697279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287812.1|1697391_1697649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287830.1|1698245_1698524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321467.1|1698557_1698809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287760.1|1699381_1700335_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002326695.1|1700331_1700913_-	DUF443 family protein	NA	NA	NA	NA	NA
WP_002321528.1|1701099_1701750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289698.1|1702292_1703228_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.1	2.0e-53
WP_002289697.1|1703261_1704260_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	62.9	2.6e-115
WP_002289695.1|1704256_1705141_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	5.4e-08
WP_002297218.1|1705384_1706680_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
>prophage 9
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	1746120	1972458	3029645	protease,holin,tail,capsid,tRNA,portal,terminase,transposase,integrase,head	Streptococcus_phage(28.89%)	230	1850673:1850732	1972481:1973994
WP_002288495.1|1746120_1747830_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002288494.1|1747897_1749166_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002296531.1|1749326_1750127_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002294134.1|1750123_1750936_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	46.8	2.0e-25
WP_002293875.1|1751130_1751688_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002293877.1|1751690_1752413_-	UMP kinase	NA	NA	NA	NA	NA
WP_002293878.1|1752548_1753430_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_002293880.1|1753528_1754311_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_002293881.1|1754669_1755149_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002326698.1|1755365_1756457_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
WP_002296514.1|1756449_1756578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288430.1|1756581_1757127_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_002288432.1|1757580_1759272_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.6	2.9e-74
WP_002288434.1|1759691_1760639_-	carbamate kinase	NA	NA	NA	NA	NA
WP_002288437.1|1760753_1761773_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_002288439.1|1761863_1763093_-	arginine deiminase	NA	NA	NA	NA	NA
WP_002288442.1|1763553_1764255_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288444.1|1764863_1765880_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.0	7.1e-60
WP_002288445.1|1765876_1766341_-	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288446.1|1766347_1766890_-	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288447.1|1766873_1767698_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_002288449.1|1767786_1768767_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.9	5.8e-19
WP_002288451.1|1768790_1770275_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002288452.1|1770286_1771276_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.8	2.1e-48
WP_002288457.1|1771523_1771691_+	DUF3042 family protein	NA	NA	NA	NA	NA
WP_002288458.1|1771752_1773564_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_002288459.1|1773560_1773926_-	DUF488 family protein	NA	NA	NA	NA	NA
WP_002288461.1|1774088_1774484_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_002288462.1|1774501_1775464_-	ROK family glucokinase	NA	NA	NA	NA	NA
WP_002293902.1|1775463_1775676_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_002289885.1|1775696_1776395_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002289886.1|1776414_1776957_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002296124.1|1777088_1778093_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002320813.1|1778089_1779079_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002293905.1|1779075_1779882_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.0e-13
WP_002293906.1|1780047_1781004_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002296121.1|1781080_1781599_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	7.1e-24
WP_002296119.1|1781686_1781836_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002288531.1|1782063_1782510_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002288533.1|1782704_1784600_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_073466279.1|1784874_1786338_-|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.2	4.0e-125
WP_000997695.1|1786947_1788126_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_071974468.1|1789706_1790354_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	J7KDP1	Streptococcus_phage	35.7	3.6e-25
WP_060797528.1|1790610_1791630_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.7	2.2e-61
WP_002302122.1|1791640_1791838_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	85.9	7.8e-24
WP_010725660.1|1791860_1792154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002342064.1|1792190_1792328_-	XkdX family protein	NA	NA	NA	NA	NA
WP_048946652.1|1792329_1792776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946653.1|1792778_1794965_-	DUF2479 domain-containing protein	NA	A0A096XSZ6	Enterococcus_phage	47.0	5.5e-86
WP_048946654.1|1794964_1795747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025478734.1|1795763_1797521_-	DUF2479 domain-containing protein	NA	Q9AZ56	Lactococcus_phage	46.1	3.2e-36
WP_048946655.1|1797495_1800327_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8BMB8	Lactococcus_phage	59.7	0.0e+00
WP_025479340.1|1800323_1801091_-|tail	phage tail protein	tail	D7RWD9	Brochothrix_phage	45.1	1.2e-59
WP_048946656.1|1801123_1804243_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	78.7	1.6e-166
WP_002318903.1|1804259_1804547_-	hypothetical protein	NA	D7RWD7	Brochothrix_phage	44.3	2.4e-13
WP_048946658.1|1804600_1804969_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	54.8	3.8e-24
WP_002323702.1|1805014_1805527_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	66.3	7.4e-58
WP_048946659.1|1805537_1805930_-	hypothetical protein	NA	Q77K20	Lactococcus_phage	73.8	9.0e-48
WP_002318275.1|1805929_1806268_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	59.8	3.0e-31
WP_002293014.1|1806251_1806578_-	hypothetical protein	NA	C9E2J7	Enterococcus_phage	70.2	1.2e-37
WP_048946660.1|1806574_1806904_-|head,tail	phage head-tail connector protein	head,tail	A0A0S2MYD5	Enterococcus_phage	75.5	3.8e-39
WP_002323699.1|1806915_1807179_-	hypothetical protein	NA	D2J062	Enterococcus_phage	75.0	6.5e-10
WP_048946661.1|1807196_1808120_-|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	77.5	2.4e-139
WP_048946662.1|1808132_1808735_-	DUF4355 domain-containing protein	NA	A0A0S2MYF0	Enterococcus_phage	51.2	4.2e-36
WP_002323698.1|1808861_1809788_-	hypothetical protein	NA	A0A1L2JXH2	Streptococcus_phage	58.7	9.8e-93
WP_048946663.1|1809792_1811292_-|portal	phage portal protein	portal	A0A097BY86	Enterococcus_phage	78.5	4.0e-221
WP_002343461.1|1811304_1812549_-|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	81.4	1.9e-200
WP_002342959.1|1812535_1813069_-|terminase	terminase small subunit	terminase	A0A059NT97	Lactococcus_phage	40.7	9.2e-19
WP_048946664.1|1813095_1813320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946665.1|1813326_1813539_-	hypothetical protein	NA	D2IZF7	Enterococcus_phage	57.4	1.4e-07
WP_047928277.1|1813900_1814080_+	YegP family protein	NA	NA	NA	NA	NA
WP_002338895.1|1814072_1814414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060797571.1|1814712_1815180_-	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	28.5	3.2e-07
WP_048946623.1|1815771_1816059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946624.1|1816055_1816265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946625.1|1816261_1816459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946626.1|1816455_1816782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946627.1|1816778_1817060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946628.1|1817072_1817291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946629.1|1817287_1817599_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	73.7	7.0e-35
WP_048946630.1|1817775_1818090_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	36.4	1.3e-09
WP_071974467.1|1818089_1818395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946632.1|1818391_1818553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321420.1|1818567_1818927_-	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	48.3	1.1e-18
WP_002326804.1|1818923_1819775_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	28.7	4.7e-25
WP_002342029.1|1819791_1820625_-	hypothetical protein	NA	J7KBV5	Streptococcus_phage	75.4	1.7e-48
WP_060797470.1|1820631_1821318_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	69.5	2.9e-89
WP_002342540.1|1821323_1822070_-	DUF1071 domain-containing protein	NA	A0A1X9IGE5	Lactococcus_phage	47.0	1.4e-41
WP_048946618.1|1822062_1822404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946619.1|1822582_1823290_-	antirepressor	NA	D2IYT0	Enterococcus_phage	56.5	2.6e-69
WP_048946573.1|1823334_1823814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002342110.1|1824054_1824321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010725712.1|1824331_1824523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946572.1|1824813_1825236_+	helix-turn-helix transcriptional regulator	NA	A0A0M4QX29	Bacillus_phage	54.0	1.5e-32
WP_002353429.1|1825252_1825675_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0B5CTZ7	Listeria_phage	50.7	1.0e-33
WP_002317583.1|1825703_1825904_+	hypothetical protein	NA	A0A097BY73	Enterococcus_phage	87.9	2.5e-25
WP_048946570.1|1827016_1828222_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	37.4	3.3e-64
WP_002296332.1|1828505_1829072_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296334.1|1829327_1830659_+	DUF1576 domain-containing protein	NA	NA	NA	NA	NA
WP_002296335.1|1830624_1830975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296336.1|1831066_1831486_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002296337.1|1831486_1831831_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_002325884.1|1832102_1833056_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287776.1|1833247_1833844_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
WP_002287775.1|1833967_1835767_+	glycerophosphoryl diester phosphodiesterase	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002297633.1|1836044_1836257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311774.1|1837120_1838080_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	27.2	7.5e-11
WP_002312603.1|1839116_1840580_+|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.2	5.3e-125
WP_002288573.1|1840803_1841190_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002288574.1|1841497_1842844_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_002288575.1|1842955_1844305_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_002288576.1|1844421_1845675_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	7.7e-24
WP_002288577.1|1845745_1846231_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002288579.1|1846253_1847012_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.4	1.9e-25
WP_002288581.1|1847027_1848206_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	3.9e-102
WP_002288584.1|1848435_1850556_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.1	2.8e-220
1850673:1850732	attL	GGCTCTTTGTCAATAAGGACTGATGAGTTGTGCAAAATCAAATCTGAGTCAGAATGAACC	NA	NA	NA	NA
WP_002297218.1|1850754_1852050_-|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
WP_002326809.1|1852194_1853490_-|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	5.0e-10
WP_002288586.1|1854536_1855046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288588.1|1855116_1856565_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002288590.1|1856564_1857281_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002288595.1|1857261_1857612_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002288592.1|1857755_1858529_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002302293.1|1859285_1859588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296623.1|1859778_1861074_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_000997695.1|1861302_1862481_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002323892.1|1863588_1863903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1864019_1865198_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002321266.1|1865534_1865774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289617.1|1866135_1866396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289618.1|1866580_1867078_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002289619.1|1867207_1867918_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_002289620.1|1867930_1869595_-	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_000997695.1|1870330_1871509_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002321035.1|1871592_1871808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303949.1|1871817_1872633_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002288989.1|1872894_1873338_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA	NA
WP_002321036.1|1873471_1873810_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288986.1|1873797_1874175_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288985.1|1874398_1875592_+	MFS transporter	NA	NA	NA	NA	NA
WP_002288984.1|1875757_1876180_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002321037.1|1876574_1876769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048946670.1|1876765_1877212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288982.1|1877421_1878594_-	class C sortase	NA	NA	NA	NA	NA
WP_002305732.1|1881706_1884034_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002296840.1|1884221_1885409_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002288970.1|1886350_1886644_-	DUF2087 domain-containing protein	NA	NA	NA	NA	NA
WP_002288969.1|1887046_1888225_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	31.1	1.4e-30
WP_002300928.1|1888328_1888643_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002288966.1|1888749_1888965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288964.1|1889264_1889507_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002288962.1|1889493_1889922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296127.1|1890073_1891621_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_002287659.1|1891722_1892076_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_002285758.1|1892065_1892260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289210.1|1892748_1893123_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_002296814.1|1893145_1894546_-	beta-fructofuranosidase	NA	NA	NA	NA	NA
WP_002289214.1|1894549_1894960_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289215.1|1894977_1895469_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002289216.1|1895478_1896270_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002289217.1|1896262_1897036_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002289218.1|1897191_1899726_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_048946680.1|1899806_1900679_-	ROK family protein	NA	NA	NA	NA	NA
WP_002289220.1|1900714_1901182_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002289221.1|1901191_1902661_-	PTS glucose transporter subunit IIABC	NA	NA	NA	NA	NA
WP_002296810.1|1902731_1904150_-	beta-fructofuranosidase	NA	NA	NA	NA	NA
WP_002296809.1|1904271_1905252_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_087040414.1|1905531_1906694_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	53.5	1.6e-79
WP_002305710.1|1906786_1907296_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002343922.1|1907634_1908588_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_077828749.1|1908540_1908777_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289051.1|1909196_1910318_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_002321361.1|1910645_1912055_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_002289053.1|1912051_1912780_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	37.1	5.1e-36
WP_002289055.1|1912907_1913819_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	42.2	1.1e-59
WP_002289057.1|1913835_1914843_-	lipoprotein	NA	A0A1S5SEZ8	Streptococcus_phage	63.9	4.8e-117
WP_002289059.1|1914839_1916969_-	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	60.3	3.1e-182
WP_002296840.1|1917269_1918457_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002321772.1|1918549_1920895_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_002288938.1|1920881_1921271_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	65.9	1.4e-40
WP_002297208.1|1921320_1922217_-	AAA family ATPase	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	29.7	1.1e-16
WP_002288935.1|1922219_1924067_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_002288934.1|1924163_1924664_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	59.6	7.0e-53
WP_033657400.1|1924676_1924901_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.8	8.8e-24
WP_002286940.1|1925004_1926915_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_002305703.1|1927660_1927798_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002286934.1|1927794_1928979_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	60.8	1.9e-141
WP_002286933.1|1929234_1929489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286932.1|1929513_1930656_-	DNA cytosine methyltransferase	NA	A0A1S5SEK0	Streptococcus_phage	62.1	1.7e-126
WP_002286930.1|1930715_1932068_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	64.6	5.9e-163
WP_074399752.1|1932138_1932492_-	damage-inducible protein J	NA	NA	NA	NA	NA
WP_002286926.1|1932492_1932867_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	62.9	1.1e-34
WP_002286925.1|1932879_1933194_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.4	1.7e-25
WP_002286924.1|1933307_1936535_-	fibrinogen-binding MSCRAMM adhesin Fss3	NA	NA	NA	NA	NA
WP_002286921.1|1936613_1937276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286913.1|1937648_1937996_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002293717.1|1938131_1938893_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_002293716.1|1938882_1939404_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002297190.1|1939573_1940365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290277.1|1940489_1940741_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_002290274.1|1940752_1941028_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_002293714.1|1941280_1941835_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
WP_002297192.1|1941913_1942435_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_002293710.1|1942438_1943017_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002293709.1|1943128_1944547_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002293708.1|1944567_1944906_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_002297194.1|1944865_1945369_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_002293705.1|1945499_1946204_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_002297195.1|1946200_1947937_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	1.2e-27
WP_002297196.1|1948039_1950511_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	28.8	7.0e-45
WP_002320964.1|1950783_1952052_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.1	1.9e-54
WP_002296623.1|1952157_1953453_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002289809.1|1954047_1954530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289810.1|1954737_1955103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002326708.1|1955193_1955511_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002296840.1|1955771_1956959_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_074394542.1|1956980_1957172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002347285.1|1957781_1959077_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	5.0e-10
WP_002287105.1|1959232_1960207_-	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
WP_002297404.1|1960616_1961867_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002295273.1|1962152_1962410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008266934.1|1962641_1963055_-	DUF4231 domain-containing protein	NA	NA	NA	NA	NA
WP_002294831.1|1963423_1964116_-	N-acetylmuramoyl-L-alanine amidase	NA	Q9MCC6	Lactobacillus_phage	43.4	2.3e-30
WP_002296536.1|1964110_1964377_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	56.5	1.4e-07
WP_002294835.1|1964552_1965122_-	prevent-host-death protein	NA	NA	NA	NA	NA
WP_002304701.1|1965195_1965519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294839.1|1965672_1966485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304700.1|1966838_1967687_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_002289045.1|1967831_1968773_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_002297218.1|1971162_1972458_+|transposase	ISL3-like element ISEfa11 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.9	2.1e-08
1972481:1973994	attR	GGTTCATTCTGACTCAGATTTGATTTTGCACAACTCATCAGTCCTTATTGACAAAGAGCCGTTTTTTGTCACAACCTTTTTTCATTATTATCTGATTTTCAATGTCAAAGCATTTAGAGCTACAACTACCGTACTTAACGACATCAAGACAGCACCAACTGCTGGACTTAATATGATACCAATTGGCGCAAGAATTCCGGCTGCTAGCGGAATTGCAAGAATATTGTAACCTGCCCCCCACCAGAGGTTCTGGATCATTTTCTTTCGCGTTTGCTTGGCTAGATCAAGAAAATGCAAAATATCTTTTGGATCGCTGTTTGTCAATACGACATCCGCAGAATCGATTGCGATATCTGTCCCTGCACCGATTGCCATCCCGATTGAAGCACGGGCTAAACTTGGCGCATCATTGATCCCATCACCCACCATGATTACTTTTTTCCCTTGGTCAAGGTATTTCTGGACAACAGCTTCTTTATCATCTGGTAATAAACCGCCATAATATTCTTCGATCCCTAAATAATCTGCTACTGCTTGGGCAGCGTTTTTATTGTCACCAGTAAGCATGACAGGAGTGATTTTTCTTTCTTTCAATGTTCGGATAAATTCTTTTGCTTCTGTTTTTACTACGTCACCTAAAGCAACGATTGCAGCTAGATGATTTTCTAAAATCAGGAAGCTGATGGTATTTCCTTGTTCTTGGTAAGGTTTCAATAATGCTTGTTCTACGTTTAATCCGAGACGCTCAACTTCTTTTTCATTAACTATTTTCACTTGTTGTTTTTTGACTGTTGCCTCTAGCCCGACTCCTGAAAGATTTTTTAGATTTTCAGCTTGATAAGGCTTGATTTCATGTTCTTTCAAATAATTCATAATGCCAACAGCCAATGGATGATTGGCATTCGCTTCCAAGGCTCCTAGATATTGAAGGATTTCATTTTTATTGAACGCATCATCAAGTACTTCGACACCCGTTACAGTAAATTTTCCTTCTGTTAGTGTTCCTGTTTTGTCCAGCATGATCACATCTAGATCATTGGCTTGCTCCAGTGCATTGCGGTTTTTCAAAAGTAATCCGTTTTTAGCTGCTATTGATGTGGAACGAGCAACAACTAATGGGATAGCTAAACCTAGAGCATGAGGACAGGCGATGATAAAGACTGTTACCATACGTTCTAATGCATTAGGAAGATCTGTCAAGAACAACCAGGCGATGAATGCCAGGATACCCACAATTAATGCGACATAAAACAGCCATTTTGCCACTTTGTCAGATAATGACTCTAGCTTGGATTTTTCTCCTTGTGCTTTTCGCACCATTTCCATAACCTTCGCTAGATAACCATTTTCACCAGTTCCAGTTACTTCGATTTCGATCGTTCCATCCCCATTGATAGAACCGCCAATCACTTTGTCATTGGCTTGTTTTTTGATTCCTCTTGATTCGCCAGTCACAGCTGATTCGTCAACAATTGTTTCACCTTTCAAGATTACACCATCTGTTGGCATTTTAT	NA	NA	NA	NA
>prophage 10
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	1978467	2043963	3029645	transposase,bacteriocin,tRNA	Streptococcus_phage(36.36%)	58	NA	NA
WP_002326809.1|1978467_1979763_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	5.0e-10
WP_002288779.1|1980233_1981700_-	amino acid permease	NA	NA	NA	NA	NA
WP_002296577.1|1981990_1984075_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	4.9e-116
WP_002288776.1|1984599_1984959_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_002319756.1|1984988_1985330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288769.1|1985326_1986001_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002288767.1|1987176_1988475_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.3	1.2e-59
WP_002296294.1|1988514_1989705_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002321579.1|1989725_1990253_-	peptidase	NA	NA	NA	NA	NA
WP_002288763.1|1990299_1993089_-	DNA polymerase III subunit epsilon	NA	A0A1X9I5C8	Streptococcus_phage	30.9	1.4e-89
WP_002288762.1|1993235_1993436_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
WP_002296295.1|1993888_1994209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294874.1|1994711_1995830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296298.1|1996300_1997608_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_002296299.1|1997728_1998928_+	YdcF family protein	NA	NA	NA	NA	NA
WP_002296300.1|1998954_2000223_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	32.3	4.4e-43
WP_002296301.1|2000392_2001034_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002296302.1|2001442_2001946_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002294889.1|2002068_2002833_-	RNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	26.1	1.7e-05
WP_002289551.1|2002940_2003216_+	acylphosphatase	NA	NA	NA	NA	NA
WP_002317189.1|2003775_2004726_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_002311321.1|2004771_2005173_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002311319.1|2005186_2005996_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002311317.1|2005982_2006873_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002311314.1|2007540_2008482_-	hexose kinase	NA	NA	NA	NA	NA
WP_002311313.1|2008478_2009474_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002311312.1|2009466_2010663_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002311311.1|2010680_2011409_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002311310.1|2011849_2012824_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002294893.1|2012820_2013279_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002317191.1|2013275_2014739_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002317192.1|2014720_2015653_-	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_002347297.1|2015794_2016463_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002337813.1|2016386_2017340_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_077974463.1|2017541_2017658_-	DUF1972 domain-containing protein	NA	NA	NA	NA	NA
WP_002297179.1|2020498_2021437_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	27.2	3.6e-10
WP_002317228.1|2021679_2022720_-	sugar kinase	NA	NA	NA	NA	NA
WP_002321992.1|2022727_2023246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071974461.1|2023191_2023770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494739.1|2023904_2025488_-	3-hydroxy-3-methylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_002297161.1|2025506_2026166_-	acylneuraminate cytidylyltransferase family protein	NA	NA	NA	NA	NA
WP_002297162.1|2026258_2027680_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_002343622.1|2027676_2028765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321991.1|2028848_2030084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297168.1|2030701_2031757_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002297169.1|2031778_2032801_-	polysaccharide biosynthesis protein	NA	A0A0N7KVT5	Yellowstone_lake_phycodnavirus	30.8	5.3e-07
WP_002297170.1|2032806_2033913_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_048946718.1|2033912_2035049_-	glycosyltransferase family 4 protein	NA	A0A1V0SD18	Indivirus	24.5	5.9e-07
WP_002317234.1|2035080_2036532_-	sugar transferase	NA	NA	NA	NA	NA
WP_002296215.1|2036575_2037340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296213.1|2037367_2038066_-	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	37.6	2.4e-27
WP_002296211.1|2038077_2038857_-	tyrosine protein kinase	NA	NA	NA	NA	NA
WP_002296209.1|2038872_2039817_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_002296207.1|2039862_2040642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010726792.1|2041068_2041977_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
WP_002296756.1|2042011_2042362_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_127821114.1|2042361_2042580_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000997695.1|2042784_2043963_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	2200938	2206611	3029645	tail,capsid,portal,terminase,head	uncultured_Caudovirales_phage(50.0%)	7	NA	NA
WP_002296483.1|2200938_2201274_-|head	phage head closure protein	head	V5UQC7	Enterococcus_phage	35.6	4.7e-13
WP_002296484.1|2201260_2201545_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_002296485.1|2201600_2203124_-|capsid	phage major capsid protein	capsid	A0A1W6JPR8	Staphylococcus_phage	37.4	1.4e-48
WP_002296486.1|2203116_2204292_-|portal	phage portal protein	portal	A0A2H4J5A4	uncultured_Caudovirales_phage	35.6	3.2e-64
WP_002317249.1|2204295_2204481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296487.1|2204446_2206141_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	43.8	9.1e-129
WP_002296488.1|2206137_2206611_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
>prophage 12
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	2427515	2505493	3029645	protease,bacteriocin,holin,tail,capsid,portal,terminase,transposase,integrase,head	Enterococcus_phage(36.0%)	92	2441841:2441900	2486367:2486427
WP_002296840.1|2427515_2428703_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002288864.1|2429115_2430741_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
WP_002288862.1|2430791_2431076_-	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	40.2	2.0e-12
WP_002288860.1|2431300_2431963_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002288858.1|2432038_2433331_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002288856.1|2433500_2434130_+	flavin reductase	NA	NA	NA	NA	NA
WP_002288854.1|2434232_2435042_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
WP_002288853.1|2435096_2435966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288852.1|2435966_2437283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288851.1|2437279_2439115_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.7	4.0e-37
WP_002288850.1|2439119_2439824_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	5.8e-45
WP_002288847.1|2440013_2440874_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.4	2.7e-12
WP_002322652.1|2440860_2441430_-	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
2441841:2441900	attL	ACTCTTAATCAGCGGGTCGCGGGTTCGAGCCCCTCACGGCCCATTGGGTGCCAAACCCAC	NA	NA	NA	NA
WP_002286680.1|2442487_2442790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|2442825_2443197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296902.1|2443198_2443600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286474.1|2443613_2444021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087046766.1|2444943_2446106_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_071974468.1|2447138_2447786_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	J7KDP1	Streptococcus_phage	35.7	3.6e-25
WP_060797528.1|2448042_2449062_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.7	2.2e-61
WP_002286683.1|2449058_2449283_-|holin	holin	holin	NA	NA	NA	NA
WP_002286686.1|2449279_2449573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296594.1|2449610_2449748_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002286491.1|2449749_2450196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494743.1|2450358_2452479_-	hypothetical protein	NA	A0A249XZH9	Enterococcus_phage	51.2	2.8e-87
WP_002290629.1|2452496_2453321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002332431.1|2453324_2454374_-	hypothetical protein	NA	Q5K5I4	Oenococcus_phage	27.9	1.9e-31
WP_002350711.1|2454370_2455243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060809390.1|2455243_2459077_-	tape measure protein	NA	A0A0M5M3L4	Enterococcus_phage	78.0	0.0e+00
WP_002290636.1|2459076_2459268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002335843.1|2459291_2459603_-	hypothetical protein	NA	A0A0M4R2F4	Enterococcus_phage	46.7	2.3e-14
WP_060809358.1|2459727_2460288_-|tail	phage tail protein	tail	A0A0S2MY53	Enterococcus_phage	47.0	3.1e-41
WP_002329393.1|2460303_2460675_-	hypothetical protein	NA	A0A060ANH4	Enterococcus_phage	46.2	2.5e-23
WP_002290643.1|2460671_2461067_-	hypothetical protein	NA	A0A0M5M1E5	Enterococcus_phage	41.7	5.8e-18
WP_060809394.1|2461063_2461399_-|head	phage head closure protein	head	A0A249XUC8	Enterococcus_phage	45.0	1.3e-18
WP_002329395.1|2461402_2461729_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_060810843.1|2461743_2462937_-|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	55.2	2.6e-114
WP_060809396.1|2462933_2463611_-|protease	Clp protease ClpP	protease	E9LUQ2	Lactobacillus_phage	51.0	2.2e-49
WP_002290649.1|2463645_2464866_-|portal	phage portal protein	portal	A0A0U3SQF0	Bacillus_phage	38.8	6.9e-62
WP_080116030.1|2466420_2467200_-	hypothetical protein	NA	A0A220BXN1	Staphylococcus_phage	45.9	8.1e-40
WP_010729417.1|2467274_2467433_+	ribbon-helix-helix domain-containing protein	NA	A0A0A7RUX5	Clostridium_phage	65.9	5.3e-07
WP_060810839.1|2467899_2468421_-|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	34.8	3.8e-17
WP_111249090.1|2468522_2468681_+	YjzC family protein	NA	A0A0A7RTS6	Clostridium_phage	65.4	9.3e-12
WP_060809363.1|2468844_2469162_-	endonuclease	NA	A0A1B1P8D2	Bacillus_phage	41.8	2.6e-13
WP_002287525.1|2469372_2470521_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002287522.1|2470537_2470942_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002304480.1|2471669_2472056_-	hypothetical protein	NA	O34053	Streptococcus_phage	55.2	1.9e-29
WP_002332450.1|2472068_2472482_-	ArpU family phage transcriptional regulator	NA	C9E2P5	Enterococcus_phage	80.3	5.6e-56
WP_002349361.1|2472741_2473035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_127822002.1|2473018_2473324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494744.1|2473320_2473524_-	toxin PIN	NA	NA	NA	NA	NA
WP_002369131.1|2473530_2473761_-	hypothetical protein	NA	A0A0S2MYD2	Enterococcus_phage	50.7	1.8e-11
WP_154494745.1|2473757_2474108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287522.1|2474178_2474583_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002287525.1|2474599_2475748_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.4	1.2e-204
WP_002371784.1|2475983_2476382_-	hypothetical protein	NA	D2IZL0	Enterococcus_phage	60.3	1.7e-33
WP_127820630.1|2476378_2476624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286550.1|2476583_2476940_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	37.4	3.1e-10
WP_002305393.1|2476939_2477245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290675.1|2477241_2477403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305394.1|2477417_2477777_-	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	48.3	3.1e-18
WP_002326804.1|2477773_2478625_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	28.7	4.7e-25
WP_002305397.1|2478641_2479472_-	replication protein	NA	C9E2N2	Enterococcus_phage	43.9	1.5e-52
WP_127820631.1|2479474_2480161_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	70.5	2.2e-89
WP_008266637.1|2480166_2480760_-	ERF family protein	NA	Q4ZC23	Staphylococcus_virus	46.1	7.1e-36
WP_127820632.1|2480746_2481094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_127820633.1|2481271_2481982_-	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	47.9	1.6e-50
WP_002323904.1|2482034_2482442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_127820634.1|2482704_2482956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002306337.1|2482975_2483179_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_086283598.1|2483471_2483792_+	helix-turn-helix transcriptional regulator	NA	M1I9X0	Streptococcus_phage	51.8	7.0e-22
WP_002293177.1|2483809_2484232_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_127820635.1|2484314_2484911_+	DUF4352 domain-containing protein	NA	A8ASM1	Listeria_phage	42.3	7.4e-17
WP_002347064.1|2485023_2486235_+|integrase	site-specific integrase	integrase	A0A0B5CTW8	Listeria_phage	30.6	1.4e-35
WP_000222572.1|2486585_2487539_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
2486367:2486427	attR	ACTCTTAATCAGCGGGTCGCGGGTTCGAGCCCCTCACGGCCCATTGGGTGCCAAACCCACG	NA	NA	NA	NA
WP_002321654.1|2487535_2487682_-|bacteriocin	EntF family bacteriocin induction factor	bacteriocin	NA	NA	NA	NA
WP_002287810.1|2487785_2488097_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_002304799.1|2488098_2488296_-	enterocin	NA	NA	NA	NA	NA
WP_002287807.1|2488689_2490417_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002287805.1|2490409_2491603_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.0	1.2e-29
WP_002287801.1|2491789_2492434_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002290587.1|2492527_2492662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287799.1|2492663_2494796_-	ferrous iron transport protein B	NA	NA	NA	NA	NA
WP_002287797.1|2494792_2495266_-	ferrous iron transport protein A	NA	NA	NA	NA	NA
WP_002287795.1|2495666_2495891_+	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	42.7	1.7e-11
WP_002287793.1|2496049_2498209_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.2	3.8e-265
WP_002287792.1|2498258_2499224_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.4	3.4e-128
WP_002287791.1|2499312_2500452_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002287788.1|2500760_2501474_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	43.7	6.5e-20
WP_002287787.1|2501727_2502429_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_002290558.1|2502662_2504195_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.0	3.3e-45
WP_002295743.1|2504584_2505493_-|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	2657085	2695610	3029645	holin,tail,tRNA,plate,transposase	Bacillus_phage(27.27%)	31	NA	NA
WP_002285932.1|2657085_2657265_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_104674935.1|2657458_2657629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303189.1|2664197_2664959_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002344993.1|2665058_2666780_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	1.3e-37
WP_002304835.1|2666794_2668579_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.2	2.1e-46
WP_002285917.1|2668959_2670513_-	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_002285916.1|2670860_2673275_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.8	0.0e+00
WP_002301403.1|2673701_2675720_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.6	5.8e-13
WP_002285911.1|2676089_2676746_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_002285909.1|2676745_2677702_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	57.4	3.3e-43
WP_002285906.1|2677701_2678268_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	42.8	2.2e-34
WP_049052232.1|2678703_2678934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002337498.1|2678939_2679239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|2679274_2679646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296902.1|2679647_2680049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002286474.1|2680062_2680470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087046766.1|2681392_2682555_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286484.1|2683494_2684520_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	61.3	2.1e-64
WP_002286683.1|2684516_2684741_-|holin	holin	holin	NA	NA	NA	NA
WP_002318262.1|2684737_2685031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071974452.1|2685068_2685206_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002347165.1|2685207_2685639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305897.1|2685652_2686147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298034.1|2686146_2686596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303306.1|2686599_2687220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946725.1|2687219_2688128_-|plate	phage baseplate upper protein	plate	A0A1P8BKW9	Lactococcus_phage	24.3	1.1e-08
WP_049050347.1|2688140_2690903_-	CHAP domain-containing protein	NA	Q9AZX5	Lactococcus_phage	39.5	1.1e-139
WP_002349898.1|2690899_2691640_-|tail	tail protein	tail	NA	NA	NA	NA
WP_002349899.1|2691629_2694419_-	tape measure protein	NA	D7RWD8	Brochothrix_phage	38.9	5.4e-70
WP_002303297.1|2694660_2695002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303295.1|2695001_2695610_-|tail	tail protein	tail	NA	NA	NA	NA
>prophage 14
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	2699313	2750278	3029645	protease,tRNA,portal,terminase,transposase,integrase,head	Enterococcus_phage(30.43%)	43	2716143:2716156	2717377:2717390
WP_002298060.1|2699313_2700192_-|head	phage head morphogenesis protein	head	NA	NA	NA	NA
WP_002298062.1|2700283_2701813_-|portal	phage portal protein	portal	A0A0S2MVB2	Bacillus_phage	25.0	1.7e-28
WP_048946578.1|2701824_2703240_-	DEAD/DEAH box helicase family protein	NA	C9E2I7	Enterococcus_phage	79.4	1.4e-218
WP_048946579.1|2703232_2704066_-|terminase	small subunit of terminase	terminase	D2IYW0	Enterococcus_phage	67.9	4.7e-78
WP_048946580.1|2704224_2704455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060763461.1|2705201_2705669_-	hypothetical protein	NA	D7RWH7	Brochothrix_phage	28.5	2.4e-07
WP_002341971.1|2705743_2706184_-	transcriptional regulator	NA	D2IYV6	Enterococcus_phage	38.4	5.3e-20
WP_048946598.1|2706213_2706507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048946597.1|2706537_2706732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033646791.1|2706837_2707290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002318210.1|2707315_2707777_-	class I SAM-dependent methyltransferase	NA	A0A2H4PBJ4	Lactobacillus_phage	67.1	1.1e-60
WP_002299339.1|2707977_2708829_-	AAA family ATPase	NA	A0A0P0I3L9	Lactobacillus_phage	30.2	2.3e-27
WP_048946585.1|2708843_2709644_-	hypothetical protein	NA	B4XYS6	Lactobacillus_phage	54.9	3.0e-58
WP_002301573.1|2709686_2710577_-	hypothetical protein	NA	D2IYT9	Enterococcus_phage	84.5	1.4e-136
WP_033646797.1|2710578_2711520_-	endonuclease	NA	D2IZK1	Enterococcus_phage	79.2	1.0e-145
WP_002303273.1|2711752_2712088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002330811.1|2712413_2712602_-	hypothetical protein	NA	D2IZW5	Enterococcus_phage	60.3	7.4e-08
WP_002304466.1|2712664_2712904_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	81.1	1.8e-27
WP_002299323.1|2712900_2713056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297389.1|2713195_2713408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297388.1|2713410_2713623_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002297387.1|2713897_2714308_+	helix-turn-helix transcriptional regulator	NA	Q5YAA4	Bacillus_phage	51.4	2.8e-31
WP_002297386.1|2714320_2714773_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002304713.1|2715211_2716144_+	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	53.8	1.8e-57
2716143:2716156	attL	AAATATATAAAAAG	NA	NA	NA	NA
WP_033647077.1|2716215_2717337_+|integrase	site-specific integrase	integrase	C9E2L6	Enterococcus_phage	38.5	4.0e-64
WP_002301355.1|2717418_2719191_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.4	1.2e-54
2717377:2717390	attR	AAATATATAAAAAG	NA	NA	NA	NA
WP_048946583.1|2719193_2720906_-	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	25.4	1.2e-14
WP_002285876.1|2721020_2721689_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002295566.1|2722626_2724099_-	MFS transporter	NA	NA	NA	NA	NA
WP_002289731.1|2724228_2725422_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	72.0	1.3e-150
WP_002326809.1|2733849_2735145_+|transposase	ISL3-like element ISEfa5 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.4	5.0e-10
WP_002301217.1|2735254_2736751_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	40.9	6.7e-91
WP_048946604.1|2736861_2737866_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_002296053.1|2737866_2738754_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_002287418.1|2738970_2741082_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	50.3	9.1e-110
WP_002287415.1|2741171_2741717_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	25.3	4.1e-06
WP_002287414.1|2741716_2743162_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	E3T4I1	Cafeteria_roenbergensis_virus	24.5	6.8e-08
WP_002287412.1|2743281_2743752_-	RNA-binding protein S1	NA	NA	NA	NA	NA
WP_002287409.1|2743797_2744223_-	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_002287407.1|2744289_2744559_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_002287405.1|2744569_2746165_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_002287403.1|2746179_2749701_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_002287401.1|2749717_2750278_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
>prophage 15
NZ_CP046077	Enterococcus faecium strain VRE chromosome, complete genome	3029645	2855002	2956552	3029645	transposase,integrase	Streptococcus_phage(51.72%)	93	2847958:2847975	2957913:2957928
2847958:2847975	attL	TTGTTCATAAAAAGAGAA	NA	NA	NA	NA
WP_086956687.1|2855002_2856165_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
2847958:2847975	attL	TTGTTCATAAAAAGAGAA	NA	NA	NA	NA
WP_002331276.1|2856205_2856451_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002331275.1|2856549_2856864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331274.1|2856931_2857426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331273.1|2857418_2857733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321375.1|2857948_2859340_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_002321374.1|2859324_2859936_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_002322532.1|2859939_2860137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002340550.1|2860127_2862806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023043245.1|2862792_2863011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321717.1|2863086_2864139_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_002321715.1|2864291_2864618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002319736.1|2864629_2864830_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002321714.1|2864904_2865555_+	helix-turn-helix transcriptional regulator	NA	Q20DG0	Lactobacillus_phage	33.3	3.2e-05
WP_002318021.1|2865609_2866776_+|integrase	site-specific integrase	integrase	A0A172LN96	Lactococcus_phage	34.0	3.3e-45
WP_002305526.1|2867192_2870420_+	fibrinogen-binding MSCRAMM adhesin Fss3	NA	NA	NA	NA	NA
WP_002303694.1|2870531_2870846_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	51.5	1.9e-24
WP_002302502.1|2870858_2871233_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	63.9	6.4e-35
WP_002305525.1|2871233_2871587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002346767.1|2871655_2872672_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	56.6	5.7e-102
WP_002330681.1|2873265_2875140_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA	NA
WP_096929203.1|2875265_2875622_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	84.6	1.3e-45
WP_002302494.1|2875666_2876809_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SEK0	Streptococcus_phage	62.4	1.6e-129
WP_002305523.1|2877343_2878528_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	63.2	8.3e-145
WP_002302478.1|2878524_2878638_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002286940.1|2879407_2881318_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_033657400.1|2881421_2881646_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.8	8.8e-24
WP_002302474.1|2881658_2882162_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	60.4	2.0e-52
WP_002302472.1|2882288_2883326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048946567.1|2883340_2885038_+	thiamine biosynthesis protein ThiF	NA	NA	NA	NA	NA
WP_002302466.1|2885030_2885492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302464.1|2885504_2886365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302462.1|2886402_2886792_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	67.5	5.1e-43
WP_002302460.1|2886778_2889226_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.4	0.0e+00
WP_002302459.1|2889230_2891339_+	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	60.9	4.5e-178
WP_002302457.1|2891335_2892340_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	64.8	5.6e-118
WP_002302456.1|2892358_2893270_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	41.1	3.0e-62
WP_002297343.1|2893931_2894147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094029191.1|2894405_2894573_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	75.0	4.4e-12
WP_002303678.1|2896904_2897576_-	hypothetical protein	NA	A0A0C5K996	Enterococcus_phage	33.9	4.1e-08
WP_010727027.1|2897924_2899376_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A075BS18	Microcystis_phage	46.1	1.9e-18
WP_002303673.1|2899487_2900831_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
2900676:2900693	attR	TTCTCTTTTTATGAACAA	NA	NA	NA	NA
WP_154494750.1|2900964_2906667_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
2900676:2900693	attR	TTCTCTTTTTATGAACAA	NA	NA	NA	NA
WP_002303670.1|2907283_2907589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303669.1|2907733_2908939_-	YSIRK-targeted surface antigen transcriptional regulator	NA	NA	NA	NA	NA
WP_002302419.1|2909632_2910019_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_002302418.1|2910116_2910308_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002305515.1|2910821_2911154_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002303668.1|2911063_2911267_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002348988.1|2911450_2911606_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002303667.1|2911881_2913222_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.0	5.1e-66
WP_002330794.1|2915194_2915413_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_106914383.1|2915433_2916069_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.1	1.2e-17
WP_002303663.1|2916261_2916501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303662.1|2916524_2918048_-	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA	NA
WP_002302412.1|2918065_2918188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303661.1|2918217_2919201_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_002297320.1|2919224_2919374_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002297319.1|2919394_2919772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297318.1|2919803_2919983_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002297316.1|2919997_2920267_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002303659.1|2920789_2922532_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.1	4.5e-30
WP_002303657.1|2922515_2924270_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.8	1.3e-24
WP_002302405.1|2924379_2924949_-	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_002305512.1|2924966_2926391_-	energy-coupling factor ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	26.4	5.9e-20
WP_002297304.1|2926392_2927061_-	cobalt transporter	NA	NA	NA	NA	NA
WP_071875988.1|2927191_2927776_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_048946685.1|2928110_2928341_-	iron-dependent repressor	NA	NA	NA	NA	NA
WP_002297295.1|2928355_2929306_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002297294.1|2929302_2930145_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002305510.1|2930277_2931003_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	33.2	5.6e-19
WP_002302388.1|2931463_2931778_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002302387.1|2931793_2933389_-	solute:sodium symporter family transporter	NA	NA	NA	NA	NA
WP_002302386.1|2933411_2934302_-	myo-inosose-2 dehydratase	NA	NA	NA	NA	NA
WP_002302385.1|2934318_2935344_-	inositol 2-dehydrogenase	NA	NA	NA	NA	NA
WP_002302384.1|2935367_2936375_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002330790.1|2936487_2937648_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002302381.1|2937723_2939178_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_002297404.1|2939586_2940837_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002305507.1|2941024_2941849_-	5-deoxy-glucuronate isomerase	NA	NA	NA	NA	NA
WP_002305506.1|2941887_2943804_-	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	24.4	6.2e-25
WP_002305505.1|2943814_2944849_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
WP_002305504.1|2945005_2946022_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_154494752.1|2946123_2946321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002351803.1|2946292_2947612_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_002303714.1|2948352_2949333_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_002302368.1|2949345_2950224_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_002303713.1|2950239_2951040_-	TrmB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002349178.1|2952383_2952758_+|transposase	transposase	transposase	Q9JMN8	Wolbachia_phage	34.6	1.2e-09
WP_002303710.1|2952765_2953674_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_071875986.1|2954302_2954554_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002302358.1|2955095_2955254_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002303709.1|2955325_2956552_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
2957913:2957928	attR	GCAAAATATGAGGAAC	NA	NA	NA	NA
>prophage 1
NZ_CP046074	Enterococcus faecium strain VRE plasmid p2_03A17012, complete sequence	15151	0	5230	15151	transposase	Erysipelothrix_phage(33.33%)	4	NA	NA
WP_071974501.1|189_2085_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	31.4	8.3e-54
WP_001863748.1|2113_2506_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_002321606.1|3492_4098_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	33.2	1.2e-19
WP_002377886.1|4543_5230_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	5.0e-126
>prophage 2
NZ_CP046074	Enterococcus faecium strain VRE plasmid p2_03A17012, complete sequence	15151	8499	11523	15151		Enterobacteria_phage(50.0%)	6	NA	NA
WP_001224538.1|8499_9117_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	33.1	5.1e-13
WP_000366408.1|9157_9457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048669782.1|9490_9688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080114260.1|10083_10323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010714377.1|10355_10640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010714376.1|10632_11523_-	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	31.7	1.5e-29
>prophage 1
NZ_CP046078	Enterococcus faecium strain VRE plasmid p4_03A17012, complete sequence	36877	22145	35547	36877	transposase	Streptococcus_phage(44.44%)	11	NA	NA
WP_000108743.1|22145_24290_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	98.6	1.3e-268
WP_000635249.1|24409_24649_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	81.5	6.8e-22
WP_001038790.1|24906_25644_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
WP_000684987.1|25840_28807_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	39.9	1.4e-212
WP_001226076.1|28952_29528_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	34.8	9.0e-20
WP_001280781.1|29741_30437_+	VanA-type vancomycin resistance DNA-binding response regulator VanR	NA	W8CYM9	Bacillus_phage	37.7	4.9e-36
WP_002305818.1|30414_31569_+	VanA-type vancomycin resistance histidine kinase VanS	NA	W8CYF6	Bacillus_phage	23.3	1.5e-13
WP_001059542.1|31783_32752_+	D-lactate dehydrogenase VanH-A	NA	M1HUW8	Acanthocystis_turfacea_Chlorella_virus	33.1	3.5e-40
WP_001079844.1|32744_33776_+	D-alanine--(R)-lactate ligase VanA	NA	NA	NA	NA	NA
WP_000402347.1|33781_34390_+	D-Ala-D-Ala dipeptidase VanX-A	NA	NA	NA	NA	NA
WP_002354485.1|34860_35547_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
>prophage 1
NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	240928	3393	64905	240928	transposase	Streptococcus_phage(38.46%)	56	NA	NA
WP_002297404.1|3393_4644_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002295673.1|5053_5293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295672.1|5359_5569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002328854.1|5628_6300_+	class A sortase	NA	NA	NA	NA	NA
WP_070828517.1|6352_8329_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002293487.1|8343_9096_+	class C sortase	NA	NA	NA	NA	NA
WP_002302869.1|9111_9873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828516.1|9885_10146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828515.1|10142_12233_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_070828514.1|12259_12724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305229.1|12720_12963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296358.1|12980_13283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002354430.1|13308_15363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321281.1|15362_17975_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_069314868.1|17971_20491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002343435.1|20542_20875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828464.1|20875_21469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828465.1|21631_23326_+	ATPase	NA	NA	NA	NA	NA
WP_002305177.1|24013_25891_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	26.3	9.1e-29
WP_002293508.1|26398_27604_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q6SEC2	Lactobacillus_prophage	41.8	6.2e-31
WP_002339834.1|27619_28264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154494710.1|28274_29081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295643.1|29103_29334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828558.1|29836_30124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002332779.1|30141_30564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154494711.1|30583_32176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070828473.1|32187_32523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302840.1|32663_32858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297404.1|32993_34244_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002354485.1|34496_35183_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_070828450.1|35224_35671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000718009.1|35684_36374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000344083.1|36498_38850_+	DUF1906 domain-containing protein	NA	NA	NA	NA	NA
WP_002304891.1|38929_39325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001224538.1|39649_40267_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	33.1	5.1e-13
WP_000366408.1|40307_40607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002354485.1|40741_41428_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_002316738.1|42471_43362_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	6.7e-22
WP_002307605.1|43358_43751_+	OsmC family protein	NA	NA	NA	NA	NA
WP_099097933.1|45906_47068_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	1.8e-80
WP_002293554.1|47468_48119_+	glutamate racemase	NA	NA	NA	NA	NA
WP_002293555.1|48163_48463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002293556.1|48563_48995_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_154494712.1|50602_51765_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	5.4e-80
WP_002293560.1|52686_53712_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
WP_002314371.1|55161_56028_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_070828444.1|56149_56692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002314366.1|57859_58132_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_002292678.1|58208_58538_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002292679.1|58527_58815_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002292680.1|59100_59958_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	30.7	8.1e-33
WP_154494713.1|59958_60507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_126145247.1|60576_61257_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	96.5	7.9e-124
WP_010706480.1|62757_63108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010729386.1|63263_63713_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_099097933.1|63742_64905_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	1.8e-80
>prophage 2
NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	240928	68603	121907	240928	transposase,integrase	Streptococcus_phage(23.08%)	41	83725:83744	125596:125615
WP_126145248.1|68603_69803_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	25.0	2.7e-26
WP_002299930.1|71746_71896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002299928.1|72617_73907_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_096157798.1|73982_74864_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002299926.1|74853_75669_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002299925.1|75684_76809_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.2	1.0e-22
WP_002299923.1|76786_77590_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_002299921.1|78040_78313_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_014748798.1|78296_78632_+	MazF family toxin-antitoxin system	NA	NA	NA	NA	NA
WP_010729381.1|80225_81500_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	35.9	9.5e-54
WP_002302980.1|81882_82611_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002340467.1|82588_84163_-	ATP-binding protein	NA	Q9EYF3	Enterobacteria_phage	30.0	9.4e-11
83725:83744	attL	TTAATGAACGAATAAAAGAA	NA	NA	NA	NA
WP_002304874.1|84391_85330_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002289655.1|85341_86253_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010729380.1|86276_87749_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002304878.1|87799_88411_+	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_002304880.1|88440_90354_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_002305865.1|90481_93463_+	glycoside hydrolase family 42	NA	L0N6M2	Herpes_simplex_virus	28.8	2.2e-122
WP_002288608.1|93459_95121_+	hyaluronate lyase	NA	NA	NA	NA	NA
WP_002288609.1|95160_96093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296127.1|96484_98032_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.9	1.7e-44
WP_002287659.1|98133_98487_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	5.7e-17
WP_002285758.1|98476_98671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494714.1|98749_100042_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.2	1.1e-54
WP_002336724.1|100804_101773_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002288615.1|101783_102599_+	fructoselysine 6-kinase	NA	NA	NA	NA	NA
WP_010729750.1|102666_103377_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_070828472.1|103412_104912_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_002298077.1|104959_106360_+	putative basic amino acid antiporter YfcC	NA	NA	NA	NA	NA
WP_002322961.1|106392_106560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002292678.1|107568_107898_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002292679.1|107887_108175_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002292680.1|108460_109318_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	30.7	8.1e-33
WP_002292681.1|109318_109867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298230.1|112358_114203_+	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA	NA
WP_002289584.1|114258_115725_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_002289586.1|115761_116604_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_000122610.1|116815_118108_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	38.9	3.2e-57
WP_000997695.1|118910_120089_+|transposase	IS256-like element ISEf1 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.6	3.0e-30
WP_002290383.1|120707_121262_+|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_010728589.1|121400_121907_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	44.2	2.5e-13
125596:125615	attR	TTAATGAACGAATAAAAGAA	NA	NA	NA	NA
>prophage 3
NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	240928	146189	213958	240928	transposase	Streptococcus_phage(48.72%)	64	NA	NA
WP_086956687.1|146189_147351_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_070828530.1|147584_147917_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	57.7	2.6e-11
WP_098381422.1|148107_149233_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	54.1	5.0e-75
WP_002287876.1|149338_149734_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_002287875.1|149743_150592_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_002287874.1|150606_151434_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_002287872.1|151445_152291_-	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_070828441.1|152543_153713_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002296840.1|153940_155128_-|transposase	IS256-like element IS16 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.3	8.2e-92
WP_002300494.1|155272_156592_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002285815.1|156588_157242_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.2	4.0e-24
WP_010729371.1|157529_158804_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.6	1.2e-56
WP_032494987.1|158858_160424_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.6	2.4e-19
WP_002285758.1|160557_160752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287659.1|160741_161095_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	5.7e-17
WP_002296127.1|161196_162744_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.9	1.7e-44
WP_002389879.1|162951_163221_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5SCV8	Streptococcus_phage	48.8	8.7e-18
WP_098381804.1|163210_163555_-	antitoxin	NA	NA	NA	NA	NA
WP_086322086.1|164243_164930_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	2.9e-126
WP_002299575.1|165054_165639_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	5.9e-43
WP_002299573.1|165849_166053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288787.1|166062_166485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002318230.1|166798_167413_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	31.9	2.6e-17
WP_002321032.1|167436_167787_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_002287514.1|167780_168044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002354485.1|168393_169080_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_025189010.1|169356_169749_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	96.9	1.4e-69
WP_001028144.1|169749_171189_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000195429.1|171318_172491_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_010726694.1|173203_173383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494715.1|173765_174284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154494716.1|174276_174714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002338052.1|174906_175113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296240.1|175560_175821_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	51.4	3.4e-11
WP_002325539.1|176186_176672_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.5	7.5e-44
WP_154494717.1|176674_177574_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002299811.1|177586_178183_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_154494722.1|178428_180633_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	51.2	1.6e-117
WP_154494718.1|180643_182104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070828478.1|182164_184537_-	hypothetical protein	NA	B5SP25	Lactococcus_phage	29.3	3.7e-11
WP_002354485.1|184824_185511_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_025192328.1|187876_188416_-	protein rep	NA	NA	NA	NA	NA
WP_000119405.1|188660_189923_-	Plasmid recombination enzyme type 2	NA	NA	NA	NA	NA
WP_002296127.1|190393_191941_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	28.9	1.7e-44
WP_002287659.1|192042_192396_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	5.7e-17
WP_002285758.1|192385_192580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001574277.1|192839_194216_-	tetracycline efflux MFS transporter Tet(L)	NA	NA	NA	NA	NA
WP_000997695.1|194487_195666_+|transposase	IS256-like element ISEf1 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.6	3.0e-30
WP_001574275.1|195755_197675_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	95.0	0.0e+00
WP_011058339.1|197690_197777_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|198051_198984_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_001574272.1|198980_199982_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	99.7	2.5e-190
WP_001574271.1|199978_202156_-	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	85.6	2.4e-307
WP_000331160.1|202158_204606_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|204589_205096_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|205070_205568_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_032509114.1|205684_205909_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	97.1	8.5e-27
WP_002286940.1|206012_207923_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_000398284.1|208706_209912_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000813488.1|210088_211474_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|211502_211889_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|211904_212219_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_001825268.1|212241_212361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106914365.1|212779_213958_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.3	1.2e-29
