assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009688945.1_ASM968894v1	NZ_AP021874	Desulfosarcina alkanivorans strain PL12	1	1419462-1419611	1	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	Orphan	AATTTTTAATTGTTTTCAGATCGATTTTGAAACCTTAATTCAAAATT	47	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	NA,NA|137aa|down_4|NZ_AP021874.1_1426294_1426705_-,NA|70aa|down_7|NZ_AP021874.1_1428712_1428922_-	NA|468aa|up_9|NZ_AP021874.1_1406259_1407663_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|148aa|up_8|NZ_AP021874.1_1407866_1408310_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|176aa|up_7|NZ_AP021874.1_1408642_1409170_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|112aa|up_6|NZ_AP021874.1_1410446_1410782_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|439aa|up_5|NZ_AP021874.1_1410940_1412257_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|448aa|up_4|NZ_AP021874.1_1412358_1413702_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|348aa|up_3|NZ_AP021874.1_1413865_1414909_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|143aa|up_2|NZ_AP021874.1_1414905_1415334_-	smart00930, NIL, This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins	NA|755aa|up_1|NZ_AP021874.1_1415707_1417972_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|417aa|up_0|NZ_AP021874.1_1418168_1419419_+	cd07343, M48A_Zmpste24p_like, Peptidase M48 subfamily A, a type 1 CaaX endopeptidase	NA|234aa|down_0|NZ_AP021874.1_1419718_1420420_-	pfam13481, AAA_25, AAA domain	NA|696aa|down_1|NZ_AP021874.1_1420650_1422738_-	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|692aa|down_2|NZ_AP021874.1_1423154_1425230_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|296aa|down_3|NZ_AP021874.1_1425304_1426192_+	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|137aa|down_4|NZ_AP021874.1_1426294_1426705_-	NA	NA|519aa|down_5|NZ_AP021874.1_1426849_1428406_+	cd00537, MTHFR, Methylenetetrahydrofolate reductase (MTHFR)	NA|116aa|down_6|NZ_AP021874.1_1428416_1428764_+	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|70aa|down_7|NZ_AP021874.1_1428712_1428922_-	NA	NA|387aa|down_8|NZ_AP021874.1_1429364_1430525_-	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family	NA|392aa|down_9|NZ_AP021874.1_1430514_1431690_-	pfam13810, DUF4185, Domain of unknown function (DUF4185)
GCF_009688945.1_ASM968894v1	NZ_AP021874	Desulfosarcina alkanivorans strain PL12	2	1784120-1785856	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	Type I-U,Type I-C, Type I-U?	GTTTCAATCCACGCCCCCGCGTGGGGGGCGAC,GTTTCAATCCACGCCCCCGCGTGGGGGGCGAC,GTTTCAATCCACGCCCCCGCGTGGGGGGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	26,26,9	26	TypeI-U,TypeI-C,TypeI-U?	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	NA,NA|80aa|down_9|NZ_AP021874.1_1796820_1797060_-	NA|113aa|up_9|NZ_AP021874.1_1771022_1771361_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|166aa|up_8|NZ_AP021874.1_1771536_1772034_+	TIGR03645, glyox_marine, lactoylglutathione lyase family protein	NA|280aa|up_7|NZ_AP021874.1_1772229_1773069_-	COG1600, COG1600, Uncharacterized Fe-S protein [Energy production and conversion]	NA|400aa|up_6|NZ_AP021874.1_1773655_1774855_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|1045aa|up_5|NZ_AP021874.1_1774993_1778128_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|433aa|up_4|NZ_AP021874.1_1778124_1779423_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|493aa|up_3|NZ_AP021874.1_1779412_1780891_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|428aa|up_2|NZ_AP021874.1_1781146_1782430_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|225aa|up_1|NZ_AP021874.1_1782447_1783122_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|147aa|up_0|NZ_AP021874.1_1783400_1783841_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	cas2|97aa|down_0|NZ_AP021874.1_1786041_1786332_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|344aa|down_1|NZ_AP021874.1_1786337_1787369_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|215aa|down_2|NZ_AP021874.1_1787365_1788010_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	NA|102aa|down_3|NZ_AP021874.1_1788098_1788404_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	cas7|303aa|down_4|NZ_AP021874.1_1788587_1789496_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|671aa|down_5|NZ_AP021874.1_1789530_1791543_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|247aa|down_6|NZ_AP021874.1_1791545_1792286_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|782aa|down_7|NZ_AP021874.1_1792308_1794654_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	WYL|325aa|down_8|NZ_AP021874.1_1795461_1796436_-	pfam13280, WYL, WYL domain	NA|80aa|down_9|NZ_AP021874.1_1796820_1797060_-	NA
GCF_009688945.1_ASM968894v1	NZ_AP021874	Desulfosarcina alkanivorans strain PL12	3	4765279-4765734	3	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	Orphan	TGAGCGGCAGCATTCCCGCCGAA	23	0	0	NA	NA	NA	6	6	Orphan	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	NA|75aa|up_8|NZ_AP021874.1_4755149_4755374_-,NA|293aa|up_7|NZ_AP021874.1_4755451_4756330_+,NA|370aa|up_5|NZ_AP021874.1_4757969_4759079_+,NA|208aa|up_2|NZ_AP021874.1_4761845_4762469_+,NA|115aa|up_1|NZ_AP021874.1_4762479_4762824_+,NA|142aa|down_5|NZ_AP021874.1_4772003_4772429_+,NA|168aa|down_6|NZ_AP021874.1_4772509_4773013_-	NA|402aa|up_9|NZ_AP021874.1_4753729_4754935_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|75aa|up_8|NZ_AP021874.1_4755149_4755374_-	NA	NA|293aa|up_7|NZ_AP021874.1_4755451_4756330_+	NA	NA|294aa|up_6|NZ_AP021874.1_4756971_4757853_+	pfam06180, CbiK, Cobalt chelatase (CbiK)	NA|370aa|up_5|NZ_AP021874.1_4757969_4759079_+	NA	NA|537aa|up_4|NZ_AP021874.1_4759786_4761397_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|115aa|up_3|NZ_AP021874.1_4761462_4761807_+	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|208aa|up_2|NZ_AP021874.1_4761845_4762469_+	NA	NA|115aa|up_1|NZ_AP021874.1_4762479_4762824_+	NA	NA|330aa|up_0|NZ_AP021874.1_4763112_4764102_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|279aa|down_0|NZ_AP021874.1_4766728_4767565_+	PRK09125, PRK09125, DNA ligase; Provisional	NA|191aa|down_1|NZ_AP021874.1_4767927_4768500_+	cd01522, RHOD_1, Member of the Rhodanese Homology Domain superfamily, subgroup 1	NA|414aa|down_2|NZ_AP021874.1_4768653_4769895_+	sd00006, TPR, Tetratricopeptide repeat	NA|155aa|down_3|NZ_AP021874.1_4770257_4770722_+	pfam09055, Sod_Ni, Nickel-containing superoxide dismutase	NA|279aa|down_4|NZ_AP021874.1_4770732_4771569_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|142aa|down_5|NZ_AP021874.1_4772003_4772429_+	NA	NA|168aa|down_6|NZ_AP021874.1_4772509_4773013_-	NA	NA|359aa|down_7|NZ_AP021874.1_4773248_4774325_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|156aa|down_8|NZ_AP021874.1_4774433_4774901_-	pfam08269, dCache_2, Cache domain	NA|73aa|down_9|NZ_AP021874.1_4775434_4775653_-	pfam08520, DUF1748, Fungal protein of unknown function (DUF1748)
GCF_009688945.1_ASM968894v1	NZ_AP021874	Desulfosarcina alkanivorans strain PL12	4	4765855-4766309	4,2	CRISPRCasFinder,PILER-CR	no		RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	Orphan	TGAGCGGCAGCATTCCCGCCGAA,CCAACCAGTTGGACGGCAGCATCCCGCCGGAATTGGGAGGCCTTGCCA	23,48	2	2	4765950-4765998|4765981-4766020	NZ_AP021874.1_4765806-4765854|NZ_AP021874.1_4765805-4765844	NA:NA	6,2	6	Orphan	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	NA|75aa|up_8|NZ_AP021874.1_4755149_4755374_-,NA|293aa|up_7|NZ_AP021874.1_4755451_4756330_+,NA|370aa|up_5|NZ_AP021874.1_4757969_4759079_+,NA|208aa|up_2|NZ_AP021874.1_4761845_4762469_+,NA|115aa|up_1|NZ_AP021874.1_4762479_4762824_+,NA|142aa|down_5|NZ_AP021874.1_4772003_4772429_+,NA|168aa|down_6|NZ_AP021874.1_4772509_4773013_-	NA|402aa|up_9|NZ_AP021874.1_4753729_4754935_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|75aa|up_8|NZ_AP021874.1_4755149_4755374_-	NA	NA|293aa|up_7|NZ_AP021874.1_4755451_4756330_+	NA	NA|294aa|up_6|NZ_AP021874.1_4756971_4757853_+	pfam06180, CbiK, Cobalt chelatase (CbiK)	NA|370aa|up_5|NZ_AP021874.1_4757969_4759079_+	NA	NA|537aa|up_4|NZ_AP021874.1_4759786_4761397_+	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|115aa|up_3|NZ_AP021874.1_4761462_4761807_+	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|208aa|up_2|NZ_AP021874.1_4761845_4762469_+	NA	NA|115aa|up_1|NZ_AP021874.1_4762479_4762824_+	NA	NA|330aa|up_0|NZ_AP021874.1_4763112_4764102_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|279aa|down_0|NZ_AP021874.1_4766728_4767565_+	PRK09125, PRK09125, DNA ligase; Provisional	NA|191aa|down_1|NZ_AP021874.1_4767927_4768500_+	cd01522, RHOD_1, Member of the Rhodanese Homology Domain superfamily, subgroup 1	NA|414aa|down_2|NZ_AP021874.1_4768653_4769895_+	sd00006, TPR, Tetratricopeptide repeat	NA|155aa|down_3|NZ_AP021874.1_4770257_4770722_+	pfam09055, Sod_Ni, Nickel-containing superoxide dismutase	NA|279aa|down_4|NZ_AP021874.1_4770732_4771569_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|142aa|down_5|NZ_AP021874.1_4772003_4772429_+	NA	NA|168aa|down_6|NZ_AP021874.1_4772509_4773013_-	NA	NA|359aa|down_7|NZ_AP021874.1_4773248_4774325_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|156aa|down_8|NZ_AP021874.1_4774433_4774901_-	pfam08269, dCache_2, Cache domain	NA|73aa|down_9|NZ_AP021874.1_4775434_4775653_-	pfam08520, DUF1748, Fungal protein of unknown function (DUF1748)
GCF_009688945.1_ASM968894v1	NZ_AP021874	Desulfosarcina alkanivorans strain PL12	5	5452072-5452703	5	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	Orphan	ATATTGGGGCGTGGGATACCTCCAGTGTCACC	32	0	0	NA	NA	NA	8	8	Orphan	RT,cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5,csa3,Cas9_archaeal,PrimPol	NA|81aa|up_7|NZ_AP021874.1_5437377_5437620_+,NA|116aa|down_5|NZ_AP021874.1_5467676_5468024_-	NA|205aa|up_9|NZ_AP021874.1_5433649_5434264_+	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	NA|257aa|up_8|NZ_AP021874.1_5436439_5437210_+	COG1397, DraG, ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]	NA|81aa|up_7|NZ_AP021874.1_5437377_5437620_+	NA	NA|255aa|up_6|NZ_AP021874.1_5437644_5438409_+	cd01310, TatD_DNAse, TatD like proteins;  E	NA|589aa|up_5|NZ_AP021874.1_5438989_5440756_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|715aa|up_4|NZ_AP021874.1_5440967_5443112_+	pfam13437, HlyD_3, HlyD family secretion protein	NA|671aa|up_3|NZ_AP021874.1_5443377_5445390_+	PRK12898, secA, preprotein translocase subunit SecA; Reviewed	NA|118aa|up_2|NZ_AP021874.1_5445545_5445899_+	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|290aa|up_1|NZ_AP021874.1_5446002_5446872_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|117aa|up_0|NZ_AP021874.1_5446950_5447301_+	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|996aa|down_0|NZ_AP021874.1_5457439_5460427_+	cd01948, EAL, EAL domain	NA|338aa|down_1|NZ_AP021874.1_5460450_5461464_+	pfam08668, HDOD, HDOD domain	NA|630aa|down_2|NZ_AP021874.1_5461588_5463478_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|334aa|down_3|NZ_AP021874.1_5463876_5464878_+	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold	NA|813aa|down_4|NZ_AP021874.1_5465061_5467500_+	cd06244, M14-like, Peptidase M14-like domain; uncharacterized subgroup	NA|116aa|down_5|NZ_AP021874.1_5467676_5468024_-	NA	NA|161aa|down_6|NZ_AP021874.1_5468053_5468536_-	pfam04008, Adenosine_kin, Adenosine specific kinase	NA|160aa|down_7|NZ_AP021874.1_5469227_5469707_+	cd03454, YdeM, YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function	NA|347aa|down_8|NZ_AP021874.1_5469896_5470937_+	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|380aa|down_9|NZ_AP021874.1_5471026_5472166_+	pfam01637, ATPase_2, ATPase domain predominantly from Archaea
