assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	1	22648-22845	1	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	GCGCCGTGCAGGACGTCAGGGGGTTGCCGGCCAGCGGCCGGCACTACC	48	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|90aa|up_5|NZ_CP040439.1_14715_14985_+,NA|115aa|down_0|NZ_CP040439.1_22847_23192_-,NA|133aa|down_1|NZ_CP040439.1_23340_23739_+,NA|131aa|down_4|NZ_CP040439.1_27367_27760_-	NA|254aa|up_9|NZ_CP040439.1_11388_12150_+	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]	NA|142aa|up_8|NZ_CP040439.1_12212_12638_+	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|138aa|up_7|NZ_CP040439.1_12641_13055_+	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|487aa|up_6|NZ_CP040439.1_13214_14675_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|90aa|up_5|NZ_CP040439.1_14715_14985_+	NA	NA|364aa|up_4|NZ_CP040439.1_15838_16930_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|236aa|up_3|NZ_CP040439.1_16984_17692_-	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|339aa|up_2|NZ_CP040439.1_17800_18817_-	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|401aa|up_1|NZ_CP040439.1_19150_20353_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|698aa|up_0|NZ_CP040439.1_20524_22618_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|115aa|down_0|NZ_CP040439.1_22847_23192_-	NA	NA|133aa|down_1|NZ_CP040439.1_23340_23739_+	NA	NA|302aa|down_2|NZ_CP040439.1_23903_24809_+	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|828aa|down_3|NZ_CP040439.1_24812_27296_+	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed	NA|131aa|down_4|NZ_CP040439.1_27367_27760_-	NA	NA|343aa|down_5|NZ_CP040439.1_27925_28954_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|213aa|down_6|NZ_CP040439.1_29049_29688_-	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|197aa|down_7|NZ_CP040439.1_29804_30395_-	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|352aa|down_8|NZ_CP040439.1_30634_31690_+	cd01545, PBP1_SalR, ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators	NA|298aa|down_9|NZ_CP040439.1_31795_32689_-	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	2	70134-70226	2	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	TGCCGGCCAGCGGCCGGCACTAC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|317aa|up_9|NZ_CP040439.1_56969_57920_+,NA|103aa|down_3|NZ_CP040439.1_76405_76714_-,NA|129aa|down_7|NZ_CP040439.1_80379_80766_+	NA|317aa|up_9|NZ_CP040439.1_56969_57920_+	NA	NA|879aa|up_8|NZ_CP040439.1_57919_60556_+	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|68aa|up_7|NZ_CP040439.1_60656_60860_-	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|310aa|up_6|NZ_CP040439.1_60942_61872_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|302aa|up_5|NZ_CP040439.1_61908_62814_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|260aa|up_4|NZ_CP040439.1_62873_63653_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|321aa|up_3|NZ_CP040439.1_63989_64952_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|289aa|up_2|NZ_CP040439.1_65230_66097_-	cd01422, MGS, Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal	NA|803aa|up_1|NZ_CP040439.1_66264_68673_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|482aa|up_0|NZ_CP040439.1_68658_70104_-	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial	NA|1485aa|down_0|NZ_CP040439.1_70228_74683_-	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|130aa|down_1|NZ_CP040439.1_74858_75248_-	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family	NA|353aa|down_2|NZ_CP040439.1_75359_76418_+	COG3569, COG3569, Topoisomerase IB [DNA replication, recombination, and repair]	NA|103aa|down_3|NZ_CP040439.1_76405_76714_-	NA	NA|369aa|down_4|NZ_CP040439.1_76907_78014_+	PRK06701, PRK06701, short chain dehydrogenase; Provisional	NA|356aa|down_5|NZ_CP040439.1_78086_79154_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|316aa|down_6|NZ_CP040439.1_79298_80246_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|129aa|down_7|NZ_CP040439.1_80379_80766_+	NA	NA|407aa|down_8|NZ_CP040439.1_80755_81976_+	cd17485, MFS_MFSD3, Major facilitator superfamily domain containing 3 protein	NA|752aa|down_9|NZ_CP040439.1_81993_84249_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	3	685595-685694	3	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	GGTAGGTGCCAACCTTGGTTGGCAC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|132aa|up_7|NZ_CP040439.1_676578_676974_-,NA|84aa|up_1|NZ_CP040439.1_683370_683622_-,NA	NA|174aa|up_9|NZ_CP040439.1_674826_675348_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|362aa|up_8|NZ_CP040439.1_675457_676543_+	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|132aa|up_7|NZ_CP040439.1_676578_676974_-	NA	NA|207aa|up_6|NZ_CP040439.1_678145_678766_-	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|216aa|up_5|NZ_CP040439.1_679173_679821_+	PRK09289, PRK09289, riboflavin synthase	NA|367aa|up_4|NZ_CP040439.1_679817_680918_+	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|156aa|up_3|NZ_CP040439.1_681112_681580_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|321aa|up_2|NZ_CP040439.1_682177_683140_+	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional	NA|84aa|up_1|NZ_CP040439.1_683370_683622_-	NA	NA|462aa|up_0|NZ_CP040439.1_683897_685283_-	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|132aa|down_0|NZ_CP040439.1_686109_686505_-	PRK12497, PRK12497, YraN family protein	NA|576aa|down_1|NZ_CP040439.1_686467_688195_-	pfam04348, LppC, LppC putative lipoprotein	NA|273aa|down_2|NZ_CP040439.1_688276_689095_+	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|160aa|down_3|NZ_CP040439.1_689725_690205_-	pfam10517, DM13, Electron transfer DM13	NA|263aa|down_4|NZ_CP040439.1_690563_691352_-	pfam05742, TANGO2, Transport and Golgi organisation 2	NA|149aa|down_5|NZ_CP040439.1_691675_692122_+	PRK00326, PRK00326, transcriptional regulator MraZ	NA|323aa|down_6|NZ_CP040439.1_692136_693105_+	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|88aa|down_7|NZ_CP040439.1_693101_693365_+	COG3116, FtsL, Cell division protein [Cell division and chromosome partitioning]	NA|615aa|down_8|NZ_CP040439.1_693361_695206_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|503aa|down_9|NZ_CP040439.1_695202_696711_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	4	749718-749944	1	PILER-CR	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	TCGGTGATCGCACACCGCATCCACGCATGGCGTGGATCTACCGTGCCGCATATCCACTT	59	1	1	749886-749918	NZ_CP040439.1_749945-749977	NA	2	2	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|144aa|up_9|NZ_CP040439.1_740046_740478_-,NA|309aa|up_2|NZ_CP040439.1_747614_748541_+,NA|177aa|up_1|NZ_CP040439.1_748797_749328_+,NA|134aa|up_0|NZ_CP040439.1_749314_749716_+,NA|164aa|down_0|NZ_CP040439.1_750025_750517_-	NA|144aa|up_9|NZ_CP040439.1_740046_740478_-	NA	NA|322aa|up_8|NZ_CP040439.1_740626_741592_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|433aa|up_7|NZ_CP040439.1_741617_742916_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|324aa|up_6|NZ_CP040439.1_743109_744081_+	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR)	NA|65aa|up_5|NZ_CP040439.1_744345_744540_+	pfam10636, hemP, Hemin uptake protein hemP	NA|736aa|up_4|NZ_CP040439.1_744729_746937_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|200aa|up_3|NZ_CP040439.1_746941_747541_+	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism]	NA|309aa|up_2|NZ_CP040439.1_747614_748541_+	NA	NA|177aa|up_1|NZ_CP040439.1_748797_749328_+	NA	NA|134aa|up_0|NZ_CP040439.1_749314_749716_+	NA	NA|164aa|down_0|NZ_CP040439.1_750025_750517_-	NA	NA|839aa|down_1|NZ_CP040439.1_750618_753135_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|216aa|down_2|NZ_CP040439.1_753131_753779_-	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|215aa|down_3|NZ_CP040439.1_753854_754499_+	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases	NA|249aa|down_4|NZ_CP040439.1_754553_755300_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|424aa|down_5|NZ_CP040439.1_755455_756727_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|down_6|NZ_CP040439.1_757022_757724_-	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|132aa|down_7|NZ_CP040439.1_757935_758331_+	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase	NA|250aa|down_8|NZ_CP040439.1_758362_759112_+	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|387aa|down_9|NZ_CP040439.1_759336_760497_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	5	792321-792410	4	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	GGTAGTGCCGGCCGCTGGCCGGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA,NA	NA|583aa|up_9|NZ_CP040439.1_781598_783347_-	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|88aa|up_8|NZ_CP040439.1_783606_783870_+	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|229aa|up_7|NZ_CP040439.1_783879_784566_+	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|319aa|up_6|NZ_CP040439.1_785157_786114_-	PRK05269, PRK05269, transaldolase B; Provisional	NA|135aa|up_5|NZ_CP040439.1_786164_786569_-	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional	NA|321aa|up_4|NZ_CP040439.1_786692_787655_-	PRK11151, PRK11151, DNA-binding transcriptional regulator OxyR; Provisional	NA|531aa|up_3|NZ_CP040439.1_787740_789333_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|188aa|up_2|NZ_CP040439.1_789558_790122_-	TIGR03137, AhpC, peroxiredoxin	NA|286aa|up_1|NZ_CP040439.1_790470_791328_+	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|314aa|up_0|NZ_CP040439.1_791376_792318_+	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily	NA|295aa|down_0|NZ_CP040439.1_792457_793342_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|472aa|down_1|NZ_CP040439.1_793447_794863_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|266aa|down_2|NZ_CP040439.1_794928_795726_-	COG3931, COG3931, Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]	NA|185aa|down_3|NZ_CP040439.1_795718_796273_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|317aa|down_4|NZ_CP040439.1_796269_797220_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|194aa|down_5|NZ_CP040439.1_797216_797798_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|774aa|down_6|NZ_CP040439.1_798129_800451_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|360aa|down_7|NZ_CP040439.1_800503_801583_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|154aa|down_8|NZ_CP040439.1_801644_802106_-	pfam11304, DUF3106, Protein of unknown function (DUF3106)	NA|109aa|down_9|NZ_CP040439.1_802109_802436_-	pfam11859, DUF3379, Protein of unknown function (DUF3379)
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	6	1586260-1586336	5	CRISPRCasFinder	no	DEDDh	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Unclear	GCAGCCTTGCCCTTGTCGGCACCGCA	26	1	1	1586286-1586310	NZ_CP040439.1_1586196-1586220	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA,NA	NA|480aa|up_9|NZ_CP040439.1_1572915_1574355_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|653aa|up_8|NZ_CP040439.1_1574351_1576310_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|415aa|up_7|NZ_CP040439.1_1576306_1577551_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|243aa|up_6|NZ_CP040439.1_1577755_1578484_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|470aa|up_5|NZ_CP040439.1_1578490_1579900_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|1009aa|up_4|NZ_CP040439.1_1580077_1583104_+	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	DEDDh|195aa|up_3|NZ_CP040439.1_1583199_1583784_-	PRK05168, PRK05168, ribonuclease T; Provisional	NA|174aa|up_2|NZ_CP040439.1_1584020_1584542_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|252aa|up_1|NZ_CP040439.1_1584567_1585323_-	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|292aa|up_0|NZ_CP040439.1_1585315_1586191_-	PRK05409, PRK05409, hypothetical protein; Provisional	NA|236aa|down_0|NZ_CP040439.1_1586745_1587453_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|277aa|down_1|NZ_CP040439.1_1587518_1588349_-	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB	NA|288aa|down_2|NZ_CP040439.1_1588368_1589232_-	PRK11268, pstA, phosphate ABC transporter permease PstA	NA|323aa|down_3|NZ_CP040439.1_1589231_1590200_-	PRK11275, pstC, phosphate ABC transporter permease PstC	NA|363aa|down_4|NZ_CP040439.1_1590282_1591371_-	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88	NA|339aa|down_5|NZ_CP040439.1_1591780_1592797_-	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88	NA|411aa|down_6|NZ_CP040439.1_1593350_1594583_+	pfam14282, FlxA, FlxA-like protein	NA|231aa|down_7|NZ_CP040439.1_1594664_1595357_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|118aa|down_8|NZ_CP040439.1_1595356_1595710_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|261aa|down_9|NZ_CP040439.1_1595714_1596497_-	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	7	2502613-2502722	6	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	CTGGTGGGTGTCAACCTTGGTTGACACGCT	30	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|126aa|up_9|NZ_CP040439.1_2491493_2491871_-,NA|91aa|up_8|NZ_CP040439.1_2492000_2492273_-,NA|423aa|up_5|NZ_CP040439.1_2493562_2494831_+,NA|125aa|down_2|NZ_CP040439.1_2504755_2505130_-,NA|248aa|down_8|NZ_CP040439.1_2510938_2511682_+	NA|126aa|up_9|NZ_CP040439.1_2491493_2491871_-	NA	NA|91aa|up_8|NZ_CP040439.1_2492000_2492273_-	NA	NA|73aa|up_7|NZ_CP040439.1_2492444_2492663_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|247aa|up_6|NZ_CP040439.1_2492749_2493490_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|423aa|up_5|NZ_CP040439.1_2493562_2494831_+	NA	NA|375aa|up_4|NZ_CP040439.1_2494916_2496041_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|324aa|up_3|NZ_CP040439.1_2496142_2497114_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|787aa|up_2|NZ_CP040439.1_2497347_2499708_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|648aa|up_1|NZ_CP040439.1_2499747_2501691_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|213aa|up_0|NZ_CP040439.1_2501802_2502441_+	PRK00031, lolA, outer membrane lipoprotein chaperone LolA	NA|454aa|down_0|NZ_CP040439.1_2502741_2504103_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|130aa|down_1|NZ_CP040439.1_2504292_2504682_+	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|125aa|down_2|NZ_CP040439.1_2504755_2505130_-	NA	NA|343aa|down_3|NZ_CP040439.1_2505450_2506479_+	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|459aa|down_4|NZ_CP040439.1_2506601_2507978_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|349aa|down_5|NZ_CP040439.1_2508029_2509076_+	COG4558, ChuT, ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|348aa|down_6|NZ_CP040439.1_2509072_2510116_+	pfam01032, FecCD, FecCD transport family	NA|254aa|down_7|NZ_CP040439.1_2510112_2510874_+	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional	NA|248aa|down_8|NZ_CP040439.1_2510938_2511682_+	NA	NA|679aa|down_9|NZ_CP040439.1_2512096_2514133_+	PRK12739, PRK12739, elongation factor G; Reviewed
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	8	4251290-4251476	7	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	GCGCCTCGGGCGCAGGCCAACCAAGGTTGGC	31	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|244aa|up_1|NZ_CP040439.1_4248407_4249139_-,NA|87aa|down_2|NZ_CP040439.1_4252986_4253247_+,NA|109aa|down_3|NZ_CP040439.1_4253322_4253649_+	NA|382aa|up_9|NZ_CP040439.1_4236978_4238124_-	TIGR02282, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase B	NA|365aa|up_8|NZ_CP040439.1_4239188_4240283_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|371aa|up_7|NZ_CP040439.1_4240460_4241573_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|692aa|up_6|NZ_CP040439.1_4241569_4243645_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|162aa|up_5|NZ_CP040439.1_4243648_4244134_-	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|349aa|up_4|NZ_CP040439.1_4245412_4246459_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|313aa|up_3|NZ_CP040439.1_4246742_4247681_+	cd01942, ribokinase_group_A, Ribokinase-like subgroup A	NA|208aa|up_2|NZ_CP040439.1_4247784_4248408_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|244aa|up_1|NZ_CP040439.1_4248407_4249139_-	NA	NA|643aa|up_0|NZ_CP040439.1_4249262_4251191_-	cd09599, M1_LTA4H, Peptidase M1 family including Leukotriene A4 hydrolase catalytic domain	NA|254aa|down_0|NZ_CP040439.1_4251493_4252255_-	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|151aa|down_1|NZ_CP040439.1_4252334_4252787_+	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases	NA|87aa|down_2|NZ_CP040439.1_4252986_4253247_+	NA	NA|109aa|down_3|NZ_CP040439.1_4253322_4253649_+	NA	NA|467aa|down_4|NZ_CP040439.1_4254277_4255678_-	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|395aa|down_5|NZ_CP040439.1_4258922_4260107_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|220aa|down_6|NZ_CP040439.1_4260334_4260994_+	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional	NA|331aa|down_7|NZ_CP040439.1_4261039_4262032_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|458aa|down_8|NZ_CP040439.1_4262087_4263461_-	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|184aa|down_9|NZ_CP040439.1_4263564_4264116_-	PRK05456, PRK05456, ATP-dependent protease subunit HslV
GCF_009676585.1_ASM967658v1	NZ_CP040439	Stenotrophomonas maltophilia strain PEG-141 chromosome, complete genome	9	4693620-4693725	8	CRISPRCasFinder	no		cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	Orphan	GTGTGCCAACCAAGGTTGGCACCTACC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DEDDh,PD-DExK,csa3,Cas9_archaeal,RT,DinG	NA|149aa|up_4|NZ_CP040439.1_4685337_4685784_-,NA|695aa|up_2|NZ_CP040439.1_4687741_4689826_-,NA|129aa|up_1|NZ_CP040439.1_4690508_4690895_-,NA|198aa|down_6|NZ_CP040439.1_4700554_4701148_+	NA|186aa|up_9|NZ_CP040439.1_4679542_4680100_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|149aa|up_8|NZ_CP040439.1_4680115_4680562_-	pfam13801, Metal_resist, Heavy-metal resistance	NA|95aa|up_7|NZ_CP040439.1_4680561_4680846_-	pfam17524, CnrY, anti-sigma factor CnrY	NA|651aa|up_6|NZ_CP040439.1_4681024_4682977_-	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	NA|418aa|up_5|NZ_CP040439.1_4683985_4685239_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|149aa|up_4|NZ_CP040439.1_4685337_4685784_-	NA	NA|641aa|up_3|NZ_CP040439.1_4685819_4687742_-	cd00797, INT_RitB_C_like, C-terminal catalytic domain of recombinase RitB, a component of the recombinase trio	NA|695aa|up_2|NZ_CP040439.1_4687741_4689826_-	NA	NA|129aa|up_1|NZ_CP040439.1_4690508_4690895_-	NA	NA|773aa|up_0|NZ_CP040439.1_4691005_4693324_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|278aa|down_0|NZ_CP040439.1_4693744_4694578_-	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|221aa|down_1|NZ_CP040439.1_4694727_4695390_+	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD	NA|321aa|down_2|NZ_CP040439.1_4695450_4696413_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|437aa|down_3|NZ_CP040439.1_4696734_4698045_-	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|147aa|down_4|NZ_CP040439.1_4698037_4698478_-	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|589aa|down_5|NZ_CP040439.1_4698788_4700555_+	cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases	NA|198aa|down_6|NZ_CP040439.1_4700554_4701148_+	NA	NA|111aa|down_7|NZ_CP040439.1_4702086_4702419_-	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV	NA|212aa|down_8|NZ_CP040439.1_4702420_4703056_-	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional	NA|659aa|down_9|NZ_CP040439.1_4703052_4705029_-	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I
