assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	1	160192-160305	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	TGGTGGGTGCCGACCGTTGGTCGGCAC	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA,NA|169aa|down_0|NZ_CP040434.1_160447_160954_+,NA|145aa|down_1|NZ_CP040434.1_161460_161895_+,NA|156aa|down_2|NZ_CP040434.1_161891_162359_+,NA|105aa|down_5|NZ_CP040434.1_164911_165226_+	NA|264aa|up_9|NZ_CP040434.1_149436_150228_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|345aa|up_8|NZ_CP040434.1_150235_151270_+	COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|690aa|up_7|NZ_CP040434.1_151326_153396_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|204aa|up_6|NZ_CP040434.1_153406_154018_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|178aa|up_5|NZ_CP040434.1_154119_154653_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|276aa|up_4|NZ_CP040434.1_154732_155560_-	pfam14302, DUF4377, Domain of unknown function (DUF4377)	NA|265aa|up_3|NZ_CP040434.1_155633_156428_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|470aa|up_2|NZ_CP040434.1_156650_158060_+	PRK09469, glnA, glutamate--ammonia ligase	NA|113aa|up_1|NZ_CP040434.1_158381_158720_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|477aa|up_0|NZ_CP040434.1_158742_160173_+	PRK10666, PRK10666, ammonium transporter AmtB	NA|169aa|down_0|NZ_CP040434.1_160447_160954_+	NA	NA|145aa|down_1|NZ_CP040434.1_161460_161895_+	NA	NA|156aa|down_2|NZ_CP040434.1_161891_162359_+	NA	NA|249aa|down_3|NZ_CP040434.1_162822_163569_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|389aa|down_4|NZ_CP040434.1_163636_164803_+	COG2821, MltA, Membrane-bound lytic murein transglycosylase [Cell envelope biogenesis, outer membrane]	NA|105aa|down_5|NZ_CP040434.1_164911_165226_+	NA	NA|682aa|down_6|NZ_CP040434.1_165329_167375_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|354aa|down_7|NZ_CP040434.1_167490_168552_+	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|483aa|down_8|NZ_CP040434.1_168544_169993_+	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|190aa|down_9|NZ_CP040434.1_170086_170656_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	2	208711-208801	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	GGTGGGTGCCAACCTTGGTTGGCACA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|257aa|up_5|NZ_CP040434.1_199681_200452_-,NA|159aa|down_1|NZ_CP040434.1_209451_209928_-	NA|730aa|up_9|NZ_CP040434.1_193225_195415_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|375aa|up_8|NZ_CP040434.1_195679_196804_-	cd05153, HomoserineK_II, Type II Homoserine Kinase	NA|136aa|up_7|NZ_CP040434.1_196925_197333_-	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB	NA|663aa|up_6|NZ_CP040434.1_197580_199569_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|257aa|up_5|NZ_CP040434.1_199681_200452_-	NA	NA|213aa|up_4|NZ_CP040434.1_200827_201466_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1200aa|up_3|NZ_CP040434.1_201541_205141_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|134aa|up_2|NZ_CP040434.1_205134_205536_-	COG3474, COG3474, Cytochrome c2 [Energy production and conversion]	NA|559aa|up_1|NZ_CP040434.1_205601_207278_-	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|388aa|up_0|NZ_CP040434.1_207535_208699_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|160aa|down_0|NZ_CP040434.1_208902_209382_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|159aa|down_1|NZ_CP040434.1_209451_209928_-	NA	NA|950aa|down_2|NZ_CP040434.1_210344_213194_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|106aa|down_3|NZ_CP040434.1_213408_213726_+	pfam13698, DUF4156, Domain of unknown function (DUF4156)	NA|339aa|down_4|NZ_CP040434.1_213829_214846_+	PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed	NA|297aa|down_5|NZ_CP040434.1_214986_215877_+	PRK00870, PRK00870, haloalkane dehalogenase; Provisional	NA|144aa|down_6|NZ_CP040434.1_215988_216420_-	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|553aa|down_7|NZ_CP040434.1_216524_218183_+	PRK09274, PRK09274, peptide synthase; Provisional	NA|331aa|down_8|NZ_CP040434.1_218179_219172_+	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs	NA|52aa|down_9|NZ_CP040434.1_219253_219409_+	COG5487, COG5487, Small integral membrane protein [Function unknown]
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	3	402607-402901	1	CRT	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	CCGCCGTTGACGGTNTCGA	19	0	0	NA	NA	NA	5	5	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|31aa|up_9|NZ_CP040434.1_380278_380371_-,NA|221aa|up_8|NZ_CP040434.1_380591_381254_-,NA|77aa|up_4|NZ_CP040434.1_384274_384505_+,NA	NA|31aa|up_9|NZ_CP040434.1_380278_380371_-	NA	NA|221aa|up_8|NZ_CP040434.1_380591_381254_-	NA	NA|220aa|up_7|NZ_CP040434.1_381272_381932_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|267aa|up_6|NZ_CP040434.1_382094_382895_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|435aa|up_5|NZ_CP040434.1_382891_384196_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|77aa|up_4|NZ_CP040434.1_384274_384505_+	NA	NA|376aa|up_3|NZ_CP040434.1_384611_385739_-	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|491aa|up_2|NZ_CP040434.1_385805_387278_-	PRK11649, PRK11649, putative peptidase; Provisional	NA|404aa|up_1|NZ_CP040434.1_387445_388657_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|570aa|up_0|NZ_CP040434.1_400569_402279_-	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|434aa|down_0|NZ_CP040434.1_403123_404425_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|487aa|down_1|NZ_CP040434.1_404533_405994_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|231aa|down_2|NZ_CP040434.1_406077_406770_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|476aa|down_3|NZ_CP040434.1_406995_408423_+	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|200aa|down_4|NZ_CP040434.1_408536_409136_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|358aa|down_5|NZ_CP040434.1_409122_410196_+	TIGR01526, nadR_NMN_Atrans, nicotinamide-nucleotide adenylyltransferase, NadR type	NA|1073aa|down_6|NZ_CP040434.1_410347_413566_-	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA|159aa|down_7|NZ_CP040434.1_413840_414317_+	pfam10003, DUF2244, Integral membrane protein (DUF2244)	NA|318aa|down_8|NZ_CP040434.1_414328_415282_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|536aa|down_9|NZ_CP040434.1_415341_416949_+	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	4	718559-718652	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	CGTGTCGACCAAGGTCGACACCTACC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|143aa|up_7|NZ_CP040434.1_711287_711716_-,NA|295aa|up_6|NZ_CP040434.1_711811_712696_-,NA|137aa|down_1|NZ_CP040434.1_719480_719891_-	NA|174aa|up_9|NZ_CP040434.1_709523_710045_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|362aa|up_8|NZ_CP040434.1_710165_711251_+	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|143aa|up_7|NZ_CP040434.1_711287_711716_-	NA	NA|295aa|up_6|NZ_CP040434.1_711811_712696_-	NA	NA|207aa|up_5|NZ_CP040434.1_712849_713470_-	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|209aa|up_4|NZ_CP040434.1_714317_714944_+	PRK09289, PRK09289, riboflavin synthase	NA|367aa|up_3|NZ_CP040434.1_714940_716041_+	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|156aa|up_2|NZ_CP040434.1_716201_716669_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|160aa|up_1|NZ_CP040434.1_716665_717145_+	PRK00202, nusB, transcription antitermination factor NusB	NA|321aa|up_0|NZ_CP040434.1_717270_718233_+	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional	NA|124aa|down_0|NZ_CP040434.1_718981_719353_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|137aa|down_1|NZ_CP040434.1_719480_719891_-	NA	NA|816aa|down_2|NZ_CP040434.1_720347_722795_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|1086aa|down_3|NZ_CP040434.1_723114_726372_+	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL	NA|674aa|down_4|NZ_CP040434.1_726567_728589_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|462aa|down_5|NZ_CP040434.1_728700_730086_-	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|227aa|down_6|NZ_CP040434.1_730082_730763_-	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|132aa|down_7|NZ_CP040434.1_730873_731269_-	PRK12497, PRK12497, YraN family protein	NA|574aa|down_8|NZ_CP040434.1_731231_732953_-	pfam04348, LppC, LppC putative lipoprotein	NA|273aa|down_9|NZ_CP040434.1_733034_733853_+	COG0313, COG0313, Predicted methyltransferases [General function prediction only]
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	5	846481-846585	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	TTTCCCGGCCAGCGGCCGGCACTACC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA,NA|140aa|down_0|NZ_CP040434.1_846616_847036_-	NA|185aa|up_9|NZ_CP040434.1_837223_837778_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|312aa|up_8|NZ_CP040434.1_837774_838710_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|194aa|up_7|NZ_CP040434.1_838706_839288_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|774aa|up_6|NZ_CP040434.1_839619_841941_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|360aa|up_5|NZ_CP040434.1_841993_843073_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|151aa|up_4|NZ_CP040434.1_843193_843646_-	pfam11304, DUF3106, Protein of unknown function (DUF3106)	NA|110aa|up_3|NZ_CP040434.1_843649_843979_-	pfam11859, DUF3379, Protein of unknown function (DUF3379)	NA|195aa|up_2|NZ_CP040434.1_843975_844560_-	PRK09047, PRK09047, RNA polymerase factor sigma-70; Validated	NA|107aa|up_1|NZ_CP040434.1_844658_844979_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|487aa|up_0|NZ_CP040434.1_844975_846436_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|140aa|down_0|NZ_CP040434.1_846616_847036_-	NA	NA|184aa|down_1|NZ_CP040434.1_847158_847710_+	TIGR03406, FeS_long_SufT, probable FeS assembly SUF system protein SufT	NA|365aa|down_2|NZ_CP040434.1_847769_848864_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|581aa|down_3|NZ_CP040434.1_849334_851077_+	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13	NA|162aa|down_4|NZ_CP040434.1_851165_851651_-	COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|112aa|down_5|NZ_CP040434.1_851730_852066_-	pfam09842, DUF2069, Predicted membrane protein (DUF2069)	NA|198aa|down_6|NZ_CP040434.1_852062_852656_-	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|425aa|down_7|NZ_CP040434.1_852733_854008_+	PRK04214, rbn, ribonuclease BN/unknown domain fusion protein; Reviewed	NA|192aa|down_8|NZ_CP040434.1_854004_854580_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|261aa|down_9|NZ_CP040434.1_855072_855855_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	6	1669416-1669509	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	GTGCCAACCAAGGTTGGCACCTACCG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|169aa|up_5|NZ_CP040434.1_1664651_1665158_-,NA	NA|307aa|up_9|NZ_CP040434.1_1660111_1661032_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|309aa|up_8|NZ_CP040434.1_1662129_1663056_-	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|270aa|up_7|NZ_CP040434.1_1663052_1663862_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|223aa|up_6|NZ_CP040434.1_1663970_1664639_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|169aa|up_5|NZ_CP040434.1_1664651_1665158_-	NA	NA|467aa|up_4|NZ_CP040434.1_1665154_1666555_-	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|160aa|up_3|NZ_CP040434.1_1666639_1667119_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|187aa|up_2|NZ_CP040434.1_1667210_1667771_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|298aa|up_1|NZ_CP040434.1_1667934_1668828_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|172aa|up_0|NZ_CP040434.1_1668860_1669376_+	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]	NA|108aa|down_0|NZ_CP040434.1_1669563_1669887_-	pfam11953, DUF3470, Domain of unknown function (DUF3470)	NA|475aa|down_1|NZ_CP040434.1_1670067_1671492_+	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|460aa|down_2|NZ_CP040434.1_1672144_1673524_+	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|162aa|down_3|NZ_CP040434.1_1673527_1674013_+	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|272aa|down_4|NZ_CP040434.1_1674047_1674863_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|280aa|down_5|NZ_CP040434.1_1674859_1675699_+	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|127aa|down_6|NZ_CP040434.1_1675860_1676241_+	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional	NA|505aa|down_7|NZ_CP040434.1_1676237_1677752_+	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|190aa|down_8|NZ_CP040434.1_1677913_1678483_-	COG4567, COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]	NA|409aa|down_9|NZ_CP040434.1_1678479_1679706_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	7	1701517-1701619	6	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Type I-A	GGTGGGTGCCAACCTTGGTTGGCAC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|150aa|up_7|NZ_CP040434.1_1695190_1695640_+,NA|150aa|up_4|NZ_CP040434.1_1697718_1698168_+,NA|164aa|down_3|NZ_CP040434.1_1705585_1706077_+	NA|262aa|up_9|NZ_CP040434.1_1694130_1694916_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|83aa|up_8|NZ_CP040434.1_1694991_1695240_+	COG2938, COG2938, Uncharacterized conserved protein [Function unknown]	NA|150aa|up_7|NZ_CP040434.1_1695190_1695640_+	NA	NA|414aa|up_6|NZ_CP040434.1_1695663_1696905_+	TIGR02212, releasing_system_transmembrane_protein_lolC	NA|238aa|up_5|NZ_CP040434.1_1696897_1697611_+	TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein	NA|150aa|up_4|NZ_CP040434.1_1697718_1698168_+	NA	NA|90aa|up_3|NZ_CP040434.1_1698242_1698512_-	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|375aa|up_2|NZ_CP040434.1_1698517_1699642_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|444aa|up_1|NZ_CP040434.1_1699724_1701056_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|100aa|up_0|NZ_CP040434.1_1701185_1701485_+	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|630aa|down_0|NZ_CP040434.1_1701701_1703591_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|193aa|down_1|NZ_CP040434.1_1704410_1704989_+	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|170aa|down_2|NZ_CP040434.1_1705015_1705525_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|164aa|down_3|NZ_CP040434.1_1705585_1706077_+	NA	NA|94aa|down_4|NZ_CP040434.1_1706209_1706491_+	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]	NA|577aa|down_5|NZ_CP040434.1_1706487_1708218_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|296aa|down_6|NZ_CP040434.1_1708338_1709226_+	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|98aa|down_7|NZ_CP040434.1_1709311_1709605_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	csa3|120aa|down_8|NZ_CP040434.1_1709728_1710088_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|160aa|down_9|NZ_CP040434.1_1710068_1710548_+	cd08896, SRPBCC_CalC_Aha1-like_3, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	8	3081352-3081446	7	CRISPRCasFinder	no	Cas9_archaeal	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Type II-A, or Type II-C?, Type II-B	GCCGACCTTGGTCGGCACGCCCA	23	0	0	NA	NA	NA	1	1	TypeII-A,orTypeII-C?,TypeII-B	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA|358aa|up_4|NZ_CP040434.1_3074931_3076005_+,NA|162aa|up_2|NZ_CP040434.1_3079107_3079593_+,NA|68aa|down_6|NZ_CP040434.1_3089521_3089725_-,NA|69aa|down_8|NZ_CP040434.1_3090594_3090801_-,NA|94aa|down_9|NZ_CP040434.1_3091202_3091484_+	NA|357aa|up_9|NZ_CP040434.1_3067767_3068838_+	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|444aa|up_8|NZ_CP040434.1_3068882_3070214_+	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|299aa|up_7|NZ_CP040434.1_3070810_3071707_-	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|629aa|up_6|NZ_CP040434.1_3071791_3073678_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|360aa|up_5|NZ_CP040434.1_3073762_3074842_+	TIGR01388, Ribonuclease_D, ribonuclease D	NA|358aa|up_4|NZ_CP040434.1_3074931_3076005_+	NA	NA|777aa|up_3|NZ_CP040434.1_3076076_3078407_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|162aa|up_2|NZ_CP040434.1_3079107_3079593_+	NA	NA|254aa|up_1|NZ_CP040434.1_3079599_3080361_-	PRK07478, PRK07478, short chain dehydrogenase; Provisional	NA|281aa|up_0|NZ_CP040434.1_3080493_3081336_+	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA|342aa|down_0|NZ_CP040434.1_3081454_3082480_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|184aa|down_1|NZ_CP040434.1_3083179_3083731_+	pfam08212, Lipocalin_2, Lipocalin-like domain	NA|159aa|down_2|NZ_CP040434.1_3083896_3084373_+	pfam03168, LEA_2, Late embryogenesis abundant protein	NA|597aa|down_3|NZ_CP040434.1_3084437_3086228_+	PTZ00456, PTZ00456, acyl-CoA dehydrogenase; Provisional	Cas9_archaeal|222aa|down_4|NZ_CP040434.1_3086703_3087369_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|636aa|down_5|NZ_CP040434.1_3087474_3089382_+	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|68aa|down_6|NZ_CP040434.1_3089521_3089725_-	NA	NA|188aa|down_7|NZ_CP040434.1_3089899_3090463_-	pfam11218, DUF3011, Protein of unknown function (DUF3011)	NA|69aa|down_8|NZ_CP040434.1_3090594_3090801_-	NA	NA|94aa|down_9|NZ_CP040434.1_3091202_3091484_+	NA
GCF_009676485.1_ASM967648v1	NZ_CP040434	Stenotrophomonas maltophilia strain PEG-68 chromosome, complete genome	9	3601181-3601276	8	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	Orphan	GTTGCCGGCCAGCGGCCGGCACTACC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,RT,Cas9_archaeal,PD-DExK,DinG	NA,NA	NA|812aa|up_9|NZ_CP040434.1_3589434_3591870_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|253aa|up_8|NZ_CP040434.1_3592021_3592780_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|594aa|up_7|NZ_CP040434.1_3592821_3594603_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|455aa|up_6|NZ_CP040434.1_3594599_3595964_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]	NA|146aa|up_5|NZ_CP040434.1_3596034_3596472_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|169aa|up_4|NZ_CP040434.1_3596446_3596953_-	pfam13761, DUF4166, Domain of unknown function (DUF4166)	NA|257aa|up_3|NZ_CP040434.1_3596973_3597744_-	PRK10723, PRK10723, polyphenol oxidase	NA|330aa|up_2|NZ_CP040434.1_3597743_3598733_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|296aa|up_1|NZ_CP040434.1_3598846_3599734_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|401aa|up_0|NZ_CP040434.1_3599945_3601148_+	pfam03583, LIP, Secretory lipase	NA|545aa|down_0|NZ_CP040434.1_3601290_3602925_-	PRK13981, PRK13981, NAD synthetase; Provisional	NA|292aa|down_1|NZ_CP040434.1_3603105_3603981_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|390aa|down_2|NZ_CP040434.1_3604001_3605171_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|538aa|down_3|NZ_CP040434.1_3605576_3607190_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|458aa|down_4|NZ_CP040434.1_3607250_3608624_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|577aa|down_5|NZ_CP040434.1_3608738_3610469_-	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB	NA|311aa|down_6|NZ_CP040434.1_3610629_3611562_-	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	NA|143aa|down_7|NZ_CP040434.1_3611666_3612095_-	COG4969, PilA, Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|420aa|down_8|NZ_CP040434.1_3612449_3613709_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|288aa|down_9|NZ_CP040434.1_3613712_3614576_+	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
