The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040429	Stenotrophomonas maltophilia strain U5 chromosome, complete genome	4541638	279577	297214	4541638	tail,head	Siphoviridae_environmental_samples(33.33%)	19	NA	NA
WP_154879091.1|279577_280090_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6JIM5	Burkholderia_virus	29.7	3.3e-05
WP_154879093.1|280086_280437_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_025875730.1|280451_280808_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_025875728.1|280886_281546_+|tail	tail protein	tail	C4ML12	Xanthomonas_virus	56.2	5.8e-63
WP_032978191.1|281545_281854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032978329.1|281904_282162_+	DUF1799 domain-containing protein	NA	Q7Y5K1	Xanthomonas_virus	37.7	5.4e-09
WP_154879095.1|282237_283596_+|tail	phage tail protein	tail	K7PM62	Enterobacteria_phage	32.0	1.0e-21
WP_025875719.1|283592_283922_+|tail	phage tail protein	tail	A0A2R3UA73	Siphoviridae_environmental_samples	50.9	4.1e-25
WP_154879098.1|283930_285079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879100.1|285148_286300_+	hypothetical protein	NA	Q2PGB9	Xanthomonas_virus	31.7	2.2e-33
WP_154879102.1|286338_287577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879104.1|287659_288790_+	hypothetical protein	NA	A0A0H4IPB2	Stenotrophomonas_phage	49.7	9.9e-71
WP_025875707.1|288939_289635_+|tail	phage minor tail protein L	tail	A0A2R3UA90	Siphoviridae_environmental_samples	67.5	2.8e-92
WP_154879106.1|289697_290438_+	peptidase P60	NA	A0A2R3UAR4	Siphoviridae_environmental_samples	58.8	5.3e-81
WP_154879108.1|290430_291024_+|tail	tail assembly protein	tail	W0LI27	Edwardsiella_phage	53.5	1.9e-49
WP_154879110.1|291020_294509_+	DUF1983 domain-containing protein	NA	A0A2R3UA88	Siphoviridae_environmental_samples	59.3	0.0e+00
WP_032951856.1|294508_294835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139784987.1|294834_295545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879112.1|295753_297214_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	63.8	2.0e-156
>prophage 2
NZ_CP040429	Stenotrophomonas maltophilia strain U5 chromosome, complete genome	4541638	622625	631603	4541638		Enterobacteria_phage(42.86%)	7	NA	NA
WP_140228336.1|622625_623681_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.5	8.3e-80
WP_025878478.1|623695_624583_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.5	8.2e-97
WP_025878479.1|624579_625137_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.1	5.4e-46
WP_154879289.1|625133_626030_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.8	5.7e-29
WP_134831974.1|626121_627525_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.5	8.0e-46
WP_154879290.1|627539_628886_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	27.4	3.0e-34
WP_154879291.1|628981_631603_-	helicase	NA	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	30.4	1.4e-48
>prophage 3
NZ_CP040429	Stenotrophomonas maltophilia strain U5 chromosome, complete genome	4541638	1645080	1705758	4541638	protease,tail,portal,terminase,capsid,head,integrase,tRNA	uncultured_Caudovirales_phage(15.38%)	65	1674636:1674651	1708695:1708710
WP_154879863.1|1645080_1646517_+	AAA family ATPase	NA	A0A2H4PAV8	Aphanizomenon_phage	28.8	2.2e-30
WP_154879865.1|1646727_1647273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879867.1|1647269_1647704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879869.1|1648846_1649389_+	hypothetical protein	NA	A0A0R6PJ56	Moraxella_phage	28.4	9.7e-08
WP_154879871.1|1649456_1649945_+	glycoside hydrolase family protein	NA	D5LH07	Escherichia_phage	78.9	5.8e-68
WP_031270409.1|1649941_1650397_+	hypothetical protein	NA	K7ZPX3	Xanthomonas_citri_phage	38.3	1.7e-13
WP_154879874.1|1650393_1650876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879876.1|1650877_1651156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879878.1|1651155_1651518_+	DUF1064 domain-containing protein	NA	Q3HQZ9	Burkholderia_phage	65.3	2.2e-40
WP_154881323.1|1652304_1652583_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154881322.1|1652599_1654423_+|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	50.1	2.8e-160
WP_154879880.1|1654419_1655679_+|portal	phage portal protein	portal	A0A2H4JFN7	uncultured_Caudovirales_phage	71.6	1.1e-163
WP_154879882.1|1655671_1656316_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JA51	uncultured_Caudovirales_phage	73.5	9.2e-82
WP_154879885.1|1656315_1657527_+|capsid	phage major capsid protein	capsid	A0A2H4J8D1	uncultured_Caudovirales_phage	64.3	1.3e-140
WP_154879887.1|1658079_1658388_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J8C5	uncultured_Caudovirales_phage	57.1	3.2e-24
WP_154879888.1|1658387_1658738_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_154879890.1|1658734_1659238_+	HK97 gp10 family phage protein	NA	Q2NPI1	Xanthomonas_virus	39.7	8.7e-27
WP_154879892.1|1659234_1659591_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_154879894.1|1659661_1660321_+|tail	phage tail protein	tail	C4ML12	Xanthomonas_virus	57.7	4.4e-63
WP_154879896.1|1660320_1660629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879898.1|1660637_1660937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879900.1|1661434_1664224_+|tail	phage tail tape measure protein	tail	A0A1V0E821	Vibrio_phage	29.9	1.6e-85
WP_154879902.1|1664220_1664550_+|tail	phage tail protein	tail	A0A2R3UA73	Siphoviridae_environmental_samples	52.7	1.2e-24
WP_154879904.1|1664559_1665672_+	hypothetical protein	NA	Q2PGC3	Xanthomonas_phage	39.1	5.8e-39
WP_154879906.1|1665674_1666148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879908.1|1666144_1666837_+|tail	phage minor tail protein L	tail	A0A2R3UA90	Siphoviridae_environmental_samples	61.5	7.4e-85
WP_154879910.1|1666929_1667670_+	peptidase P60	NA	A0A2R3UAR4	Siphoviridae_environmental_samples	60.3	1.5e-83
WP_154879912.1|1667662_1668280_+|tail	tail assembly protein	tail	Q6JIL3	Burkholderia_virus	56.1	2.9e-48
WP_154879914.1|1668276_1671807_+	DUF1983 domain-containing protein	NA	A0A2R3UA88	Siphoviridae_environmental_samples	61.7	0.0e+00
WP_154879916.1|1671806_1672196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879918.1|1672195_1672933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154881324.1|1672983_1673916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154879920.1|1673912_1674188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154879922.1|1674249_1674864_+	hypothetical protein	NA	NA	NA	NA	NA
1674636:1674651	attL	CAGCGCTGCCTCGGCG	NA	NA	NA	NA
WP_154879924.1|1675326_1675821_+	hypothetical protein	NA	B7SYF7	Stenotrophomonas_phage	54.4	3.6e-41
WP_154879927.1|1675970_1677533_-	hypothetical protein	NA	R9TRQ8	Vibrio_phage	28.9	7.6e-29
WP_154879929.1|1677586_1678561_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.8	1.3e-71
WP_080278357.1|1678924_1679947_+	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_080149520.1|1680011_1680458_+	BLUF domain-containing protein	NA	NA	NA	NA	NA
WP_154879932.1|1680569_1681856_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
WP_025878880.1|1681900_1683523_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA	NA
WP_025878881.1|1683585_1684047_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_154879936.1|1684072_1685320_-	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
WP_025878883.1|1685306_1685741_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_032976499.1|1685810_1686176_+	membrane protein	NA	NA	NA	NA	NA
WP_032976500.1|1686472_1687240_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_154879939.1|1687362_1688358_+	MsnO8 family LLM class oxidoreductase	NA	NA	NA	NA	NA
WP_154879941.1|1688425_1688923_+	general stress protein	NA	NA	NA	NA	NA
WP_025878888.1|1689012_1689666_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_049464874.1|1689649_1690969_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_025878890.1|1691246_1691873_+	DUF47 family protein	NA	NA	NA	NA	NA
WP_025878891.1|1691886_1693008_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_154879944.1|1693483_1694980_-	peptidase S10	NA	NA	NA	NA	NA
WP_059063745.1|1695078_1695657_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_025878894.1|1695813_1697703_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	34.7	8.1e-94
WP_154879947.1|1697863_1698097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025878896.1|1698498_1700163_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.9	4.6e-141
WP_012510652.1|1700251_1701082_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.3	7.5e-52
WP_154879949.1|1701078_1701426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105163832.1|1701425_1701758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032976506.1|1701855_1703148_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	61.9	1.4e-142
WP_025878900.1|1703152_1703503_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_032976507.1|1703499_1704198_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_025878902.1|1704232_1704730_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_154879952.1|1704726_1705758_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
1708695:1708710	attR	CGCCGAGGCAGCGCTG	NA	NA	NA	NA
