assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	1	1046894-1046982	1	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA	NA|83aa|up_9|NZ_CP045975.1_1037370_1037619_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP045975.1_1037618_1037954_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP045975.1_1038024_1038816_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP045975.1_1039043_1040681_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP045975.1_1040768_1042067_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP045975.1_1042126_1043041_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP045975.1_1043037_1044186_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|225aa|up_2|NZ_CP045975.1_1044419_1045094_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP045975.1_1045107_1045728_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP045975.1_1045882_1046554_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP045975.1_1047617_1049096_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP045975.1_1049122_1050400_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP045975.1_1050718_1051504_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP045975.1_1051573_1053028_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|260aa|down_4|NZ_CP045975.1_1054435_1055215_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP045975.1_1056219_1056795_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP045975.1_1056811_1057072_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_7|NZ_CP045975.1_1057062_1058334_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|down_8|NZ_CP045975.1_1058411_1058777_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP045975.1_1059092_1060892_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	2	1072673-1072885	1,1,2	PILER-CR,CRT,CRISPRCasFinder	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Type I-E	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,30,29	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA	NA|571aa|up_9|NZ_CP045975.1_1060891_1062604_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP045975.1_1062677_1063412_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_7|NZ_CP045975.1_1063675_1063828_+	pfam01848, HOK_GEF, Hok/gef family	cas8e|521aa|up_6|NZ_CP045975.1_1066815_1068378_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP045975.1_1068374_1068911_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP045975.1_1068922_1069978_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP045975.1_1069988_1070735_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP045975.1_1070716_1071367_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP045975.1_1071363_1072287_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP045975.1_1072283_1072577_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP045975.1_1072966_1074004_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP045975.1_1074255_1075164_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP045975.1_1075165_1076593_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP045975.1_1076592_1077198_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP045975.1_1077247_1077571_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP045975.1_1077764_1078076_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP045975.1_1078094_1078805_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP045975.1_1078804_1079284_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP045975.1_1079280_1080330_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP045975.1_1080310_1081072_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	3	1653808-1653913	3	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|357aa|up_5|NZ_CP045975.1_1647787_1648858_-,NA	NA|420aa|up_9|NZ_CP045975.1_1641974_1643234_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP045975.1_1643223_1644852_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP045975.1_1645124_1646483_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP045975.1_1646487_1647564_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP045975.1_1647787_1648858_-	NA	NA|293aa|up_4|NZ_CP045975.1_1649321_1650200_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP045975.1_1650351_1651542_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP045975.1_1651622_1652273_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP045975.1_1652326_1652581_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP045975.1_1652580_1653711_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP045975.1_1653937_1656223_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP045975.1_1656918_1660671_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP045975.1_1660811_1661534_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP045975.1_1661680_1664308_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|543aa|down_4|NZ_CP045975.1_1664515_1666144_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP045975.1_1666140_1666764_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP045975.1_1666907_1671302_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|259aa|down_7|NZ_CP045975.1_1672956_1673733_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|950aa|down_8|NZ_CP045975.1_1674007_1676857_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|217aa|down_9|NZ_CP045975.1_1677056_1677707_-	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	4	2265794-2265943	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|22aa|up_2|NZ_CP045975.1_2263881_2263947_+,NA	NA|1129aa|up_9|NZ_CP045975.1_2253857_2257244_-	pfam15962, DUF4765, Domain of unknown function (DUF4765)	NA|189aa|up_8|NZ_CP045975.1_2258663_2259230_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP045975.1_2259539_2261312_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP045975.1_2261429_2261882_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP045975.1_2261910_2262651_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP045975.1_2262685_2263207_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP045975.1_2263208_2263811_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP045975.1_2263881_2263947_+	NA	NA|204aa|up_1|NZ_CP045975.1_2264085_2264697_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP045975.1_2264705_2265716_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP045975.1_2265961_2266747_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP045975.1_2266743_2267499_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP045975.1_2267577_2268510_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP045975.1_2268525_2269848_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP045975.1_2269967_2270939_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP045975.1_2271069_2272512_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP045975.1_2272639_2273509_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP045975.1_2273846_2275322_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP045975.1_2275556_2277368_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP045975.1_2277404_2278046_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	5	2464430-2464553	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA|30aa|down_7|NZ_CP045975.1_2473449_2473539_+	NA|471aa|up_9|NZ_CP045975.1_2453883_2455296_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP045975.1_2455852_2456062_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP045975.1_2456517_2457144_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP045975.1_2457164_2459267_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP045975.1_2459270_2459918_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP045975.1_2459981_2460650_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP045975.1_2460646_2461432_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP045975.1_2461435_2462248_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP045975.1_2462259_2463864_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP045975.1_2463989_2464295_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP045975.1_2464867_2466124_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP045975.1_2466164_2467538_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP045975.1_2467752_2468394_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP045975.1_2468433_2469582_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP045975.1_2469872_2471084_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP045975.1_2471196_2472129_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP045975.1_2472125_2473151_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP045975.1_2473449_2473539_+	NA	NA|390aa|down_8|NZ_CP045975.1_2473704_2474874_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP045975.1_2475019_2475601_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	6	3195757-3195870	2	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|47aa|up_9|NZ_CP045975.1_3190216_3190357_-,NA|41aa|up_3|NZ_CP045975.1_3193706_3193829_-,NA|101aa|up_1|NZ_CP045975.1_3194293_3194596_-,NA|79aa|down_0|NZ_CP045975.1_3196218_3196455_+	NA|47aa|up_9|NZ_CP045975.1_3190216_3190357_-	NA	NA|121aa|up_8|NZ_CP045975.1_3190353_3190716_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|97aa|up_7|NZ_CP045975.1_3190712_3191003_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NZ_CP045975.1_3190995_3191166_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NZ_CP045975.1_3191165_3191621_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|509aa|up_4|NZ_CP045975.1_3192122_3193649_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|41aa|up_3|NZ_CP045975.1_3193706_3193829_-	NA	NA|111aa|up_2|NZ_CP045975.1_3193893_3194226_-	PRK09541, emrE, EmrE family multidrug efflux SMR transporter	NA|101aa|up_1|NZ_CP045975.1_3194293_3194596_-	NA	NA|234aa|up_0|NZ_CP045975.1_3194592_3195294_-	pfam06992, Phage_lambda_P, Replication protein P	NA|79aa|down_0|NZ_CP045975.1_3196218_3196455_+	NA	NA|381aa|down_1|NZ_CP045975.1_3196444_3197587_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|417aa|down_2|NZ_CP045975.1_3197700_3198951_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|218aa|down_3|NZ_CP045975.1_3199122_3199776_+	PRK11394, PRK11394, 23S rRNA pseudouridine(2457) synthase RluE	NA|154aa|down_4|NZ_CP045975.1_3199785_3200247_+	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|369aa|down_5|NZ_CP045975.1_3200300_3201407_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|214aa|down_6|NZ_CP045975.1_3201442_3202084_+	PRK00218, PRK00218, lysogenization regulator HflD	NA|457aa|down_7|NZ_CP045975.1_3202087_3203458_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|224aa|down_8|NZ_CP045975.1_3203626_3204298_+	PRK10816, PRK10816, two-component system response regulator PhoP	NA|487aa|down_9|NZ_CP045975.1_3204297_3205758_+	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	7	4680977-4681111	6	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|190aa|up_7|NZ_CP045975.1_4671365_4671935_-,NA|246aa|down_4|NZ_CP045975.1_4688404_4689142_-	NA|44aa|up_9|NZ_CP045975.1_4669258_4669390_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP045975.1_4669478_4671137_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP045975.1_4671365_4671935_-	NA	NA|328aa|up_6|NZ_CP045975.1_4672306_4673290_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP045975.1_4673265_4674876_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP045975.1_4674859_4675558_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP045975.1_4675644_4676409_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP045975.1_4676494_4677373_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP045975.1_4677711_4679412_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP045975.1_4679422_4680925_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP045975.1_4681124_4681820_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP045975.1_4681894_4684246_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP045975.1_4684409_4687316_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP045975.1_4687327_4687987_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|246aa|down_4|NZ_CP045975.1_4688404_4689142_-	NA	NA|272aa|down_5|NZ_CP045975.1_4689436_4690252_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP045975.1_4690506_4692861_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP045975.1_4692913_4694200_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP045975.1_4694199_4695189_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP045975.1_4695185_4696007_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_009664455.1_ASM966445v1	NZ_CP045975	Escherichia coli strain AUSMDU00002545 chromosome, complete genome	8	4911025-4911174	7	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA|585aa|down_6|NZ_CP045975.1_4918271_4920026_-	NA|156aa|up_9|NZ_CP045975.1_4897997_4898465_+	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_8|NZ_CP045975.1_4899468_4899801_+	pfam07978, NIPSNAP, NIPSNAP	NA|126aa|up_7|NZ_CP045975.1_4899922_4900300_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|405aa|up_6|NZ_CP045975.1_4900482_4901696_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|650aa|up_5|NZ_CP045975.1_4901895_4903845_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|340aa|up_4|NZ_CP045975.1_4904215_4905235_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP045975.1_4905364_4906867_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP045975.1_4907027_4908110_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP045975.1_4908109_4909210_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP045975.1_4909476_4910988_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP045975.1_4911341_4911785_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP045975.1_4911784_4914640_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP045975.1_4914694_4915891_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP045975.1_4916083_4916587_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP045975.1_4916632_4917049_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP045975.1_4917210_4918215_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|585aa|down_6|NZ_CP045975.1_4918271_4920026_-	NA	NA|151aa|down_7|NZ_CP045975.1_4920148_4920601_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP045975.1_4920745_4921339_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_9|NZ_CP045975.1_4921409_4922123_+	PRK12742, PRK12742, SDR family oxidoreductase
