The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044310	Paenibacillus xylanilyticus strain W4 chromosome, complete genome	6447596	766981	778518	6447596		Mollivirus(25.0%)	10	NA	NA
WP_095288455.1|766981_768280_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	26.5	2.0e-19
WP_153976878.1|768515_769388_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	32.9	1.3e-38
WP_090904903.1|769978_770224_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A0E3FJ99	Synechococcus_phage	39.0	1.3e-07
WP_153976879.1|770228_770918_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_095288458.1|770895_773139_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	43.2	4.3e-166
WP_153976880.1|773123_774602_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.5e-52
WP_153976881.1|774614_775058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153976882.1|775109_776150_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.0	4.2e-68
WP_153976883.1|776149_776767_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.0	8.4e-24
WP_153976884.1|776970_778518_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.3	3.4e-74
>prophage 2
NZ_CP044310	Paenibacillus xylanilyticus strain W4 chromosome, complete genome	6447596	1316159	1329409	6447596	plate,tail,holin,portal	Bacillus_phage(41.67%)	16	NA	NA
WP_153977252.1|1316159_1317071_+	hypothetical protein	NA	A0A2H4J4Q0	uncultured_Caudovirales_phage	25.5	3.6e-15
WP_153977253.1|1317140_1317341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153977254.1|1317340_1318804_+|tail	phage tail sheath protein	tail	A0A0N7AEC6	Bacillus_phage	35.2	2.9e-75
WP_095288940.1|1318903_1319311_+|tail	phage tail tube protein	tail	A0A2H4J032	uncultured_Caudovirales_phage	56.5	1.6e-39
WP_095288941.1|1319475_1319910_+	hypothetical protein	NA	A0A2H4J883	uncultured_Caudovirales_phage	41.3	3.6e-21
WP_153977255.1|1320093_1321881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153980580.1|1321935_1322565_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0N7ACF7	Bacillus_phage	47.4	1.5e-39
WP_153977256.1|1322561_1323548_+|portal	phage portal protein	portal	A0A0N6W8H4	Bacillus_phage	47.4	8.6e-79
WP_153977257.1|1323540_1323951_+	hypothetical protein	NA	A0A0N7ACD3	Bacillus_phage	32.3	5.6e-08
WP_153977258.1|1323943_1324399_+	DUF2634 domain-containing protein	NA	A0A0N7ACH4	Bacillus_phage	41.1	4.9e-21
WP_153977259.1|1324403_1325543_+|plate	Baseplate J family protein	plate	S6AVU3	Thermus_phage	36.5	5.0e-46
WP_153977260.1|1325529_1326129_+	DUF2313 domain-containing protein	NA	A0A0A8WI80	Clostridium_phage	34.0	1.4e-20
WP_153977261.1|1326128_1327331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153977262.1|1327600_1328098_+|holin	holin	holin	D0R7H7	Paenibacillus_phage	68.3	5.7e-47
WP_153977263.1|1328084_1328330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153977264.1|1328479_1329409_+	1,4-beta-N-acetylmuramidase	NA	D0R7H8	Paenibacillus_phage	52.2	3.4e-61
>prophage 3
NZ_CP044310	Paenibacillus xylanilyticus strain W4 chromosome, complete genome	6447596	4259867	4269083	6447596		Staphylococcus_phage(50.0%)	10	NA	NA
WP_153979213.1|4259867_4261055_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	35.3	2.4e-27
WP_153979214.1|4261186_4261672_-	sporulation protein YtfJ	NA	NA	NA	NA	NA
WP_153979215.1|4261858_4262578_-	DUF2953 domain-containing protein	NA	NA	NA	NA	NA
WP_153979216.1|4262778_4263453_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	33.7	3.0e-14
WP_153979217.1|4263421_4264222_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	27.3	1.6e-06
WP_153979218.1|4264324_4264792_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	57.6	4.2e-44
WP_095359245.1|4264877_4266116_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	52.4	6.9e-118
WP_095290513.1|4266155_4266824_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	3.2e-37
WP_167301702.1|4266870_4267974_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.8	1.5e-63
WP_095290511.1|4268651_4269083_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	47.3	5.5e-22
>prophage 4
NZ_CP044310	Paenibacillus xylanilyticus strain W4 chromosome, complete genome	6447596	4299408	4323541	6447596	terminase,capsid,tail,integrase,portal	Paenibacillus_phage(40.0%)	26	4295569:4295582	4321966:4321979
4295569:4295582	attL	GCAAATGGAGCAGT	NA	NA	NA	NA
WP_153979239.1|4299408_4300440_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	30.7	6.3e-32
WP_153979240.1|4300517_4300835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153979241.1|4300897_4301074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979242.1|4301075_4301762_-	N-acetylmuramoyl-L-alanine amidase	NA	M1PRV7	Streptococcus_phage	49.3	1.1e-27
WP_153979243.1|4301763_4302072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979244.1|4302052_4302247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979245.1|4302315_4302555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153979246.1|4302704_4303247_-	copper amine oxidase	NA	R9TPZ8	Paenibacillus_phage	36.0	3.2e-19
WP_153979247.1|4303296_4305408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979248.1|4305418_4307527_-	hypothetical protein	NA	M9PKD4	Escherichia_phage	37.1	2.2e-07
WP_153979249.1|4307544_4308330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979250.1|4308329_4311989_-|tail	phage tail tape measure protein	tail	A0A097P6S4	Vibrio_phage	39.6	2.2e-47
WP_153980773.1|4313058_4313388_-|tail	phage tail tape measure protein	tail	D6R3Z8	Bacillus_phage	55.4	3.7e-10
WP_153979251.1|4313664_4313874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979252.1|4313951_4314347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979253.1|4314397_4314928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979254.1|4315359_4315764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979255.1|4315763_4316084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979256.1|4316083_4316467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979257.1|4316482_4316707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979258.1|4316725_4317652_-	hypothetical protein	NA	A0A2H5BLW0	Streptomyces_phage	57.8	6.0e-90
WP_153979259.1|4317708_4318317_-	scaffolding protein	NA	NA	NA	NA	NA
WP_153979260.1|4318396_4319545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979261.1|4319545_4320388_-|capsid	minor capsid protein	capsid	A0A0N9SJR1	Paenibacillus_phage	49.8	3.5e-73
WP_153980774.1|4320387_4321821_-|portal	phage portal protein	portal	A0A0N7GFE4	Paenibacillus_phage	53.3	1.6e-129
WP_153980775.1|4321852_4323541_-|terminase	phage terminase large subunit	terminase	A0A0N9RZA7	Paenibacillus_phage	66.5	1.0e-212
4321966:4321979	attR	ACTGCTCCATTTGC	NA	NA	NA	NA
>prophage 5
NZ_CP044310	Paenibacillus xylanilyticus strain W4 chromosome, complete genome	6447596	5056813	5126097	6447596	tRNA,protease,integrase	Tupanvirus(13.04%)	64	5057346:5057363	5110714:5110731
WP_153979704.1|5056813_5057350_-|protease	protease	protease	NA	NA	NA	NA
5057346:5057363	attL	TCCATTCCCCGTTCCTCC	NA	NA	NA	NA
WP_153979705.1|5057564_5058728_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_153979706.1|5058818_5059406_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_153979707.1|5059698_5061297_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_095359770.1|5061312_5062302_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	38.4	4.6e-56
WP_153979708.1|5062303_5063485_-	galactokinase	NA	NA	NA	NA	NA
WP_153980821.1|5063686_5064598_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153980822.1|5064754_5065762_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
WP_153979709.1|5065843_5066584_-	NAD-dependent protein deacylase	NA	A0A068EPD4	Bacillus_phage	33.6	1.2e-29
WP_153979710.1|5066614_5067391_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_153979711.1|5067418_5068183_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_095359776.1|5068273_5068939_-	bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_153979712.1|5069026_5069992_-	sugar kinase	NA	NA	NA	NA	NA
WP_153979713.1|5070214_5071255_+	fucose 4-O-acetylase	NA	NA	NA	NA	NA
WP_127538648.1|5071376_5071628_+	general stress protein	NA	NA	NA	NA	NA
WP_153979714.1|5071939_5073625_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_153979715.1|5073772_5075197_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_153979716.1|5075368_5076565_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_153980823.1|5076543_5078238_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_153980824.1|5078486_5080721_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.7	2.5e-09
WP_153979717.1|5080956_5082285_-|protease	collagenase-like protease	protease	Q6DW11	Phage_TP	35.4	1.4e-44
WP_153979718.1|5082302_5083232_-	U32 family peptidase	NA	Q6DW11	Phage_TP	29.3	1.9e-19
WP_153980825.1|5083247_5084273_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_095289524.1|5084363_5084678_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_095289523.1|5084678_5084978_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_153979719.1|5084990_5085407_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_024633073.1|5085532_5085793_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_153979720.1|5086046_5088665_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	36.7	1.3e-70
WP_095289520.1|5089097_5090165_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_095289519.1|5090440_5090650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095289518.1|5090660_5091182_-	photosystem reaction center subunit H	NA	NA	NA	NA	NA
WP_153979721.1|5091347_5092499_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_153979722.1|5092953_5093601_-	GNAT family acetyltransferase	NA	C8CH40	Staphylococcus_phage	34.6	3.5e-28
WP_153979723.1|5093600_5093783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979724.1|5094253_5094481_-	helix-turn-helix domain-containing protein	NA	A0A2H4JDR0	uncultured_Caudovirales_phage	39.7	1.3e-06
WP_153979725.1|5095138_5096164_-|protease	serine protease	protease	NA	NA	NA	NA
WP_162009977.1|5096505_5097156_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2K9VGT1	Pontimonas_phage	40.3	1.7e-14
WP_162009978.1|5097159_5097597_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153979728.1|5097759_5098230_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2I7SC21	Paenibacillus_phage	53.0	5.6e-36
WP_153979729.1|5098319_5098508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153979730.1|5098558_5099260_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0C5AN64	Paenibacillus_phage	33.6	1.6e-31
WP_153979731.1|5099299_5099542_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0N9SGH8	Paenibacillus_phage	47.4	1.8e-09
WP_127538637.1|5099632_5100052_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_141236692.1|5100368_5101493_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_153979732.1|5101625_5101985_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_153979733.1|5101981_5102380_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_153979734.1|5102408_5103716_-	AAA family ATPase	NA	G3MBE0	Bacillus_virus	49.7	2.4e-105
WP_153979735.1|5103767_5104646_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_153979736.1|5104784_5105528_+	SDR family NAD(P)-dependent oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	29.8	1.4e-12
WP_153980826.1|5105557_5106463_+	EamA family transporter	NA	NA	NA	NA	NA
WP_153979737.1|5106561_5108748_-	AAA family ATPase	NA	A0A1V0SET7	Hokovirus	25.5	3.4e-11
WP_153979738.1|5108924_5110733_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	54.7	1.0e-146
5110714:5110731	attR	TCCATTCCCCGTTCCTCC	NA	NA	NA	NA
WP_153979739.1|5110788_5112087_-	NCS2 family permease	NA	NA	NA	NA	NA
WP_095289508.1|5112254_5113013_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_153979740.1|5113031_5114810_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	25.4	4.7e-19
WP_153979741.1|5115027_5116281_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	25.2	2.2e-18
WP_153979742.1|5117006_5117459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153979743.1|5117545_5118052_-|protease	DJ-1/PfpI/YhbO family deglycase/protease	protease	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	37.6	2.3e-19
WP_153979744.1|5118370_5118538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095289486.1|5118612_5119074_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_153980827.1|5119086_5121264_-	RelA/SpoT family protein	NA	J9Q7H7	Salmonella_phage	40.7	2.6e-11
WP_153979745.1|5121636_5122953_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	37.2	5.5e-65
WP_095289483.1|5123139_5123652_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.4	1.5e-29
WP_153979746.1|5123688_5126097_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	32.8	2.3e-85
