assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009664245.1_ASM966424v1	NZ_CP026525	Sinorhizobium meliloti strain AK21 chromosome, complete genome	1	1139621-1139734	1	CRISPRCasFinder	no		DEDDh,WYL,PD-DExK,cas3,csa3	Orphan	CGGAGAGGCAGGCCCGTACGGACTCCCGCCGGGAGAAA	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,PD-DExK,cas3,csa3,RT	NA|52aa|up_4|NZ_CP026525.1_1134950_1135106_-,NA|59aa|up_3|NZ_CP026525.1_1135143_1135320_-,NA	NA|987aa|up_9|NZ_CP026525.1_1123716_1126677_+	PRK14108, PRK14108, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA|773aa|up_8|NZ_CP026525.1_1126687_1129006_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|885aa|up_7|NZ_CP026525.1_1129368_1132023_-	PRK14015, pepN, aminopeptidase N; Provisional	NA|313aa|up_6|NZ_CP026525.1_1132448_1133387_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|430aa|up_5|NZ_CP026525.1_1133396_1134686_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|52aa|up_4|NZ_CP026525.1_1134950_1135106_-	NA	NA|59aa|up_3|NZ_CP026525.1_1135143_1135320_-	NA	NA|287aa|up_2|NZ_CP026525.1_1135458_1136319_-	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins	NA|430aa|up_1|NZ_CP026525.1_1136391_1137681_-	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|555aa|up_0|NZ_CP026525.1_1137950_1139615_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|333aa|down_0|NZ_CP026525.1_1140179_1141178_+	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold	NA|296aa|down_1|NZ_CP026525.1_1141398_1142286_+	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]	NA|338aa|down_2|NZ_CP026525.1_1142375_1143389_-	TIGR02817, Putative_oxidoreductase_transmembrane_protein, zinc-binding alcohol dehydrogenase family protein	NA|134aa|down_3|NZ_CP026525.1_1143489_1143891_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|309aa|down_4|NZ_CP026525.1_1144029_1144956_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|496aa|down_5|NZ_CP026525.1_1144971_1146459_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|340aa|down_6|NZ_CP026525.1_1146451_1147471_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|319aa|down_7|NZ_CP026525.1_1147566_1148523_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|501aa|down_8|NZ_CP026525.1_1148551_1150054_-	PRK08292, PRK08292, AMP nucleosidase; Provisional	NA|107aa|down_9|NZ_CP026525.1_1150133_1150454_-	COG1742, COG1742, Uncharacterized conserved protein [Function unknown]
GCF_009664245.1_ASM966424v1	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1	534446-534555	1	CRISPRCasFinder	no		DEDDh,WYL,RT	Orphan	TCATCCCGGCGGTCCCGCCGCGCGGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,PD-DExK,cas3,csa3,RT	NA|129aa|up_8|NZ_CP026526.1_526621_527008_-,NA|108aa|up_6|NZ_CP026526.1_528370_528694_-,NA|86aa|up_5|NZ_CP026526.1_529200_529458_+,NA|117aa|up_3|NZ_CP026526.1_532657_533008_+,NA|116aa|up_0|NZ_CP026526.1_533715_534063_-,NA|160aa|down_1|NZ_CP026526.1_539191_539671_+,NA|90aa|down_3|NZ_CP026526.1_540478_540748_-,NA|163aa|down_6|NZ_CP026526.1_544330_544819_+	NA|524aa|up_9|NZ_CP026526.1_524358_525930_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|129aa|up_8|NZ_CP026526.1_526621_527008_-	NA	NA|224aa|up_7|NZ_CP026526.1_527705_528377_+	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	NA|108aa|up_6|NZ_CP026526.1_528370_528694_-	NA	NA|86aa|up_5|NZ_CP026526.1_529200_529458_+	NA	NA|135aa|up_4|NZ_CP026526.1_529860_530265_+	pfam07886, BA14K, BA14K-like protein	NA|117aa|up_3|NZ_CP026526.1_532657_533008_+	NA	NA|96aa|up_2|NZ_CP026526.1_533089_533377_+	pfam07756, DUF1612, Protein of unknown function (DUF1612)	NA|67aa|up_1|NZ_CP026526.1_533474_533675_+	pfam11972, HTH_13, HTH DNA binding domain	NA|116aa|up_0|NZ_CP026526.1_533715_534063_-	NA	NA|354aa|down_0|NZ_CP026526.1_536103_537164_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_1|NZ_CP026526.1_539191_539671_+	NA	NA|212aa|down_2|NZ_CP026526.1_539728_540364_-	PRK09391, fixK, transcriptional regulator FixK; Provisional	NA|90aa|down_3|NZ_CP026526.1_540478_540748_-	NA	NA|586aa|down_4|NZ_CP026526.1_540888_542646_+	COG5616, COG5616, Predicted integral membrane protein [Function unknown]	NA|382aa|down_5|NZ_CP026526.1_542688_543834_-	PRK10983, PRK10983, AI-2E family transporter YdiK	NA|163aa|down_6|NZ_CP026526.1_544330_544819_+	NA	NA|410aa|down_7|NZ_CP026526.1_544822_546052_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|282aa|down_8|NZ_CP026526.1_546162_547008_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|226aa|down_9|NZ_CP026526.1_547170_547848_-	pfam01988, VIT1, VIT family
GCF_009664245.1_ASM966424v1	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1	657908-658025	1	CRISPRCasFinder	no		csa3,RT	Orphan	TGCCGCCCGCACCGCCGCTGCCGCCGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,PD-DExK,cas3,csa3,RT	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-,NA|309aa|up_2|NZ_CP026527.1_652136_653063_-,NA|131aa|down_0|NZ_CP026527.1_662148_662541_-,NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA|297aa|up_9|NZ_CP026527.1_643448_644339_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|208aa|up_8|NZ_CP026527.1_644538_645162_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|326aa|up_7|NZ_CP026527.1_645158_646136_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|742aa|up_6|NZ_CP026527.1_646132_648358_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|594aa|up_5|NZ_CP026527.1_648438_650220_-	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-	NA	NA|170aa|up_3|NZ_CP026527.1_651464_651974_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|309aa|up_2|NZ_CP026527.1_652136_653063_-	NA	NA|414aa|up_1|NZ_CP026527.1_653087_654329_-	pfam04143, Sulf_transp, Sulphur transport	NA|306aa|up_0|NZ_CP026527.1_654408_655326_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|131aa|down_0|NZ_CP026527.1_662148_662541_-	NA	NA|384aa|down_1|NZ_CP026527.1_662631_663783_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|261aa|down_2|NZ_CP026527.1_663770_664553_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA	NA|1113aa|down_4|NZ_CP026527.1_665165_668504_-	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|681aa|down_5|NZ_CP026527.1_668688_670731_-	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|388aa|down_6|NZ_CP026527.1_670736_671900_-	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|341aa|down_7|NZ_CP026527.1_671989_673012_-	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|486aa|down_8|NZ_CP026527.1_673534_674992_-	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|425aa|down_9|NZ_CP026527.1_674988_676263_-	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase
GCF_009664245.1_ASM966424v1	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	2	658115-658214	2	CRISPRCasFinder	no		csa3,RT	Orphan	TGCCGCCCGCACCGCCGCTGCCGCCGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,PD-DExK,cas3,csa3,RT	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-,NA|309aa|up_2|NZ_CP026527.1_652136_653063_-,NA|131aa|down_0|NZ_CP026527.1_662148_662541_-,NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA|297aa|up_9|NZ_CP026527.1_643448_644339_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|208aa|up_8|NZ_CP026527.1_644538_645162_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|326aa|up_7|NZ_CP026527.1_645158_646136_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|742aa|up_6|NZ_CP026527.1_646132_648358_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|594aa|up_5|NZ_CP026527.1_648438_650220_-	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-	NA	NA|170aa|up_3|NZ_CP026527.1_651464_651974_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|309aa|up_2|NZ_CP026527.1_652136_653063_-	NA	NA|414aa|up_1|NZ_CP026527.1_653087_654329_-	pfam04143, Sulf_transp, Sulphur transport	NA|306aa|up_0|NZ_CP026527.1_654408_655326_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|131aa|down_0|NZ_CP026527.1_662148_662541_-	NA	NA|384aa|down_1|NZ_CP026527.1_662631_663783_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|261aa|down_2|NZ_CP026527.1_663770_664553_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA	NA|1113aa|down_4|NZ_CP026527.1_665165_668504_-	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|681aa|down_5|NZ_CP026527.1_668688_670731_-	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|388aa|down_6|NZ_CP026527.1_670736_671900_-	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|341aa|down_7|NZ_CP026527.1_671989_673012_-	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|486aa|down_8|NZ_CP026527.1_673534_674992_-	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|425aa|down_9|NZ_CP026527.1_674988_676263_-	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase
GCF_009664245.1_ASM966424v1	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	3	658289-658408	3	CRISPRCasFinder	no		csa3,RT	Orphan	TGCCGCCCGCACCGCCGCTGCCGCCGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,PD-DExK,cas3,csa3,RT	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-,NA|309aa|up_2|NZ_CP026527.1_652136_653063_-,NA|131aa|down_0|NZ_CP026527.1_662148_662541_-,NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA|297aa|up_9|NZ_CP026527.1_643448_644339_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|208aa|up_8|NZ_CP026527.1_644538_645162_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|326aa|up_7|NZ_CP026527.1_645158_646136_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|742aa|up_6|NZ_CP026527.1_646132_648358_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|594aa|up_5|NZ_CP026527.1_648438_650220_-	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|181aa|up_4|NZ_CP026527.1_650719_651262_-	NA	NA|170aa|up_3|NZ_CP026527.1_651464_651974_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|309aa|up_2|NZ_CP026527.1_652136_653063_-	NA	NA|414aa|up_1|NZ_CP026527.1_653087_654329_-	pfam04143, Sulf_transp, Sulphur transport	NA|306aa|up_0|NZ_CP026527.1_654408_655326_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|131aa|down_0|NZ_CP026527.1_662148_662541_-	NA	NA|384aa|down_1|NZ_CP026527.1_662631_663783_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|261aa|down_2|NZ_CP026527.1_663770_664553_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|133aa|down_3|NZ_CP026527.1_664641_665040_-	NA	NA|1113aa|down_4|NZ_CP026527.1_665165_668504_-	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|681aa|down_5|NZ_CP026527.1_668688_670731_-	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|388aa|down_6|NZ_CP026527.1_670736_671900_-	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|341aa|down_7|NZ_CP026527.1_671989_673012_-	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|486aa|down_8|NZ_CP026527.1_673534_674992_-	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase	NA|425aa|down_9|NZ_CP026527.1_674988_676263_-	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase
