The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045794	Vibrio parahaemolyticus 10329 chromosome 1, complete sequence	3311004	1165722	1183120	3311004	tRNA	uncultured_Mediterranean_phage(20.0%)	14	NA	NA
WP_005455581.1|1165722_1167363_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
WP_005455579.1|1167441_1168743_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455577.1|1169370_1169652_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005493934.1|1169653_1170358_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	24.3	3.4e-05
WP_005493937.1|1170375_1170852_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_005493940.1|1170898_1171942_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005493942.1|1171941_1172718_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	6.6e-66
WP_005455562.1|1172717_1173344_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_005455560.1|1173358_1174282_+	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005493944.1|1175431_1177993_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.9	4.4e-34
WP_005493945.1|1178077_1178560_+	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	2.9e-27
WP_005478550.1|1178760_1179804_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_005493947.1|1179927_1180395_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005455546.1|1180537_1183120_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
>prophage 2
NZ_CP045794	Vibrio parahaemolyticus 10329 chromosome 1, complete sequence	3311004	2211877	2223073	3311004		Vibrio_phage(91.67%)	18	NA	NA
WP_005494987.1|2211877_2212243_+	hypothetical protein	NA	Q9MCC4	Vibrio_phage	95.9	6.0e-62
WP_005494989.1|2212272_2212983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005494991.1|2213121_2213400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005494993.1|2213551_2213824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101893729.1|2214252_2214369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005494995.1|2214339_2214483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005494996.1|2214482_2215868_-	toxin	NA	Q783T9	Vibrio_phage	99.1	1.2e-264
WP_005477634.1|2215872_2216217_-	DUF2523 domain-containing protein	NA	Q783U0	Vibrio_phage	100.0	5.0e-58
WP_005494998.1|2216218_2217325_-	hypothetical protein	NA	Q783U1	Vibrio_phage	98.6	1.3e-155
WP_011105866.1|2217727_2217838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495000.1|2217850_2218096_-	hypothetical protein	NA	Q783U2	Vibrio_phage	97.5	3.7e-31
WP_005477619.1|2218101_2218332_-	hypothetical protein	NA	Q783U3	Vibrio_phage	100.0	1.6e-36
WP_005477647.1|2218335_2218695_-	DUF1293 domain-containing protein	NA	Q783U4	Vibrio_phage	100.0	9.1e-63
WP_079400570.1|2218698_2219907_-	phage replication protein	NA	Q7DKP2	Vibrio_phage	99.8	4.7e-244
WP_005488200.1|2219830_2220046_-	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	98.6	1.8e-34
WP_021447749.1|2220049_2220673_-	3'-5' exonuclease	NA	W6ASW5	Vibrio_phage	50.3	8.5e-40
WP_005495006.1|2220806_2221175_+	hypothetical protein	NA	Q9MCC3	Vibrio_phage	59.5	1.6e-33
WP_005495008.1|2221342_2223073_-	response regulator	NA	A0A1V0SGX0	Hokovirus	31.3	2.1e-43
>prophage 3
NZ_CP045794	Vibrio parahaemolyticus 10329 chromosome 1, complete sequence	3311004	2466130	2474197	3311004		Vibrio_phage(28.57%)	12	NA	NA
WP_005495398.1|2466130_2468356_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.7	8.2e-61
WP_005483265.1|2468650_2468863_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	2.9e-16
WP_005495400.1|2469767_2469971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495402.1|2470193_2470601_-	APSE-2 prophage; Q protein	NA	NA	NA	NA	NA
WP_005495404.1|2470637_2471039_-	NinG recombination protein/bacteriophage lambda NinG family protein	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_005495406.1|2471028_2471211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495408.1|2471207_2471858_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	36.5	7.0e-21
WP_005495410.1|2471850_2472231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495412.1|2472227_2473181_-	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.3	3.8e-39
WP_005495414.1|2473246_2473465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005495415.1|2473461_2473926_-	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.0	3.0e-18
WP_005495417.1|2473945_2474197_-	hypothetical protein	NA	A0A1I9KFF6	Aeromonas_phage	41.9	3.8e-07
>prophage 4
NZ_CP045794	Vibrio parahaemolyticus 10329 chromosome 1, complete sequence	3311004	2746755	2756569	3311004	tRNA	Klosneuvirus(16.67%)	7	NA	NA
WP_005495749.1|2746755_2748036_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.4	2.5e-22
WP_005495751.1|2748105_2748372_-	DksA/TraR family C4-type zinc finger protein	NA	A0A1S6UBD1	Serratia_phage	48.9	2.1e-16
WP_023650089.1|2748924_2749824_-	DUF3380 domain-containing protein	NA	K4RM41	Pseudomonas_phage	43.0	4.8e-36
WP_005495761.1|2750026_2751334_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	42.8	2.2e-90
WP_005495763.1|2751425_2752775_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	42.1	1.1e-84
WP_005460060.1|2752781_2753408_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_005495766.1|2753482_2756569_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.9	3.8e-88
>prophage 5
NZ_CP045794	Vibrio parahaemolyticus 10329 chromosome 1, complete sequence	3311004	3187834	3194536	3311004		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005440184.1|3187834_3188305_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
WP_005496254.1|3188474_3189584_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005496255.1|3189753_3190407_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.0	2.1e-33
WP_005496256.1|3190419_3191544_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	1.8e-48
WP_005482986.1|3191551_3192001_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_005496257.1|3192128_3193379_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	3.6e-98
WP_005483011.1|3193396_3194536_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
>prophage 1
NZ_CP045795	Vibrio parahaemolyticus 10329 chromosome 2, complete sequence	1833086	1633537	1684989	1833086	transposase,integrase,protease	Vibrio_phage(37.5%)	44	1664067:1664091	1678946:1678970
WP_005499394.1|1633537_1634830_-|protease	serine protease	protease	V5LS29	Emiliania_huxleyi_virus	22.7	4.5e-11
WP_005499396.1|1635065_1635470_-	cell division protein DamX	NA	NA	NA	NA	NA
WP_005499397.1|1635756_1636926_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	45.6	3.4e-82
WP_011106462.1|1637562_1637865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499399.1|1638352_1639210_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA	NA
WP_005499401.1|1639422_1639989_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005499403.1|1640088_1640622_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_005499405.1|1640870_1641053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499407.1|1641136_1641976_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005499413.1|1643983_1644574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499414.1|1644756_1645476_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_101893994.1|1645619_1645733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079451942.1|1645744_1646554_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_079748673.1|1646550_1647498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499420.1|1647469_1648612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079748682.1|1648851_1649475_+	cupin	NA	NA	NA	NA	NA
WP_079399849.1|1651156_1651813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005499427.1|1651805_1652120_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_021448349.1|1653908_1654829_-|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	88.5	2.3e-158
WP_005499450.1|1657356_1657881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005499452.1|1658097_1658466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021448345.1|1659835_1661662_-	cell motility protein	NA	NA	NA	NA	NA
WP_011106469.1|1661934_1662030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023650135.1|1662333_1662903_-	thermostable direct hemolysin TDH	NA	NA	NA	NA	NA
WP_021448344.1|1663116_1664037_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	91.1	1.2e-162
1664067:1664091	attL	TCTGACCGAATTACGCAACAAAGCC	NA	NA	NA	NA
WP_079399902.1|1664945_1665257_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_005499462.1|1665451_1666090_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_020842398.1|1666098_1666764_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_005499466.1|1666791_1667271_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_005499467.1|1667325_1669029_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_005499468.1|1669025_1669349_-	urease subunit beta	NA	NA	NA	NA	NA
WP_005499469.1|1669359_1669662_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_005499470.1|1669679_1670522_-	urease accessory protein ureD	NA	NA	NA	NA	NA
WP_005499471.1|1670927_1672466_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023650108.1|1672456_1673425_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005499475.1|1673441_1674242_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005499477.1|1674229_1674922_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	24.3	9.8e-05
WP_005499478.1|1674918_1675545_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	27.3	1.8e-05
WP_005499480.1|1675691_1676540_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005499483.1|1676976_1677546_+	TDH-related hemolysin TRH1	NA	NA	NA	NA	NA
WP_021448339.1|1677870_1678761_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	86.9	1.6e-153
WP_100198882.1|1678985_1679888_-	OspB protein	NA	A0A0P0ZCT1	Stx2-converting_phage	35.3	1.2e-29
1678946:1678970	attR	GGCTTTGTTGCGTAATTCGGTCAGA	NA	NA	NA	NA
WP_005499492.1|1680103_1680508_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_021448338.1|1680618_1684989_-|protease	SslE/AcfD family lipoprotein zinc metalloprotease	protease	NA	NA	NA	NA
