assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009648775.1_ASM964877v1	NZ_CP045766	Salmonella bongori CFSAN000510 strain SGSC 3100 chromosome, complete genome	1	1923721-1924786	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG,cas14j	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	16,17,17	17	TypeI-E	DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG,cas14j	NA,NA	NA|447aa|up_9|NZ_CP045766.1_1907651_1908992_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|447aa|up_8|NZ_CP045766.1_1909012_1910353_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|381aa|up_7|NZ_CP045766.1_1910431_1911574_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|919aa|up_6|NZ_CP045766.1_1911703_1914460_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_5|NZ_CP045766.1_1914517_1915813_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_4|NZ_CP045766.1_1915864_1918099_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_3|NZ_CP045766.1_1918216_1919008_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP045766.1_1919235_1920873_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP045766.1_1920955_1922254_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP045766.1_1922758_1923430_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|121aa|down_0|NZ_CP045766.1_1925741_1926104_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_1|NZ_CP045766.1_1926410_1928210_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_2|NZ_CP045766.1_1928209_1929922_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_3|NZ_CP045766.1_1930005_1930740_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_4|NZ_CP045766.1_1930830_1931784_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|down_5|NZ_CP045766.1_1932220_1934884_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|down_6|NZ_CP045766.1_1934895_1936452_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|185aa|down_7|NZ_CP045766.1_1936448_1937003_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|down_8|NZ_CP045766.1_1937016_1938072_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|down_9|NZ_CP045766.1_1938082_1938829_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5
GCF_009648775.1_ASM964877v1	NZ_CP045766	Salmonella bongori CFSAN000510 strain SGSC 3100 chromosome, complete genome	2	1940768-1942016	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG,cas14j	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	1940858-1940889	NZ_CP045766.1_1946857-1946888	I-E:I-E:I-E	19,20,20	20	TypeI-E	DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG,cas14j	NA,NA	NA|245aa|up_9|NZ_CP045766.1_1930005_1930740_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_8|NZ_CP045766.1_1930830_1931784_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|up_7|NZ_CP045766.1_1932220_1934884_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|NZ_CP045766.1_1934895_1936452_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|185aa|up_5|NZ_CP045766.1_1936448_1937003_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP045766.1_1937016_1938072_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP045766.1_1938082_1938829_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP045766.1_1938810_1939461_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|307aa|up_1|NZ_CP045766.1_1939457_1940378_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP045766.1_1940377_1940671_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|351aa|down_0|NZ_CP045766.1_1942157_1943210_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP045766.1_1943462_1944371_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP045766.1_1944380_1945820_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP045766.1_1945806_1946412_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP045766.1_1946462_1946786_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP045766.1_1946976_1947288_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP045766.1_1947306_1948017_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP045766.1_1948016_1948496_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP045766.1_1948492_1949542_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP045766.1_1949522_1950284_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
