assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009648695.1_ASM964869v1	NZ_CP045749	Listeria monocytogenes strain CFSAN008100 chromosome, complete genome	1	2606794-2607051	1	CRISPRCasFinder	no	RT	csa3,WYL,DinG,cas3,DEDDh,RT,casR	Unclear	CATATTAGTAACGGAACTCGTATC	24	0	0	NA	NA	NA	3	3	Orphan	csa3,WYL,DinG,cas3,DEDDh,RT,casR,cas5	NA|89aa|up_3|NZ_CP045749.1_2604246_2604513_-,NA|162aa|up_1|NZ_CP045749.1_2604921_2605407_-,NA|158aa|up_0|NZ_CP045749.1_2605426_2605900_-,NA	RT|588aa|up_9|NZ_CP045749.1_2596380_2598144_-	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|122aa|up_8|NZ_CP045749.1_2598417_2598783_-	PRK13316, PRK13316, heme oxygenase IsdG	NA|160aa|up_7|NZ_CP045749.1_2598940_2599420_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|368aa|up_6|NZ_CP045749.1_2599509_2600613_-	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional	NA|567aa|up_5|NZ_CP045749.1_2600763_2602464_-	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown]	NA|187aa|up_4|NZ_CP045749.1_2602573_2603134_-	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region	NA|89aa|up_3|NZ_CP045749.1_2604246_2604513_-	NA	NA|102aa|up_2|NZ_CP045749.1_2604588_2604894_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|162aa|up_1|NZ_CP045749.1_2604921_2605407_-	NA	NA|158aa|up_0|NZ_CP045749.1_2605426_2605900_-	NA	NA|690aa|down_0|NZ_CP045749.1_2607858_2609928_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|668aa|down_1|NZ_CP045749.1_2610063_2612067_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|513aa|down_2|NZ_CP045749.1_2612330_2613869_-	pfam05043, Mga, Mga helix-turn-helix domain	NA|517aa|down_3|NZ_CP045749.1_2614502_2616053_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|367aa|down_4|NZ_CP045749.1_2616045_2617146_-	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|428aa|down_5|NZ_CP045749.1_2617146_2618430_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|532aa|down_6|NZ_CP045749.1_2618564_2620160_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|316aa|down_7|NZ_CP045749.1_2620315_2621263_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|383aa|down_8|NZ_CP045749.1_2621267_2622416_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|720aa|down_9|NZ_CP045749.1_2622412_2624572_+	pfam01841, Transglut_core, Transglutaminase-like superfamily
GCF_009648695.1_ASM964869v1	NZ_CP045749	Listeria monocytogenes strain CFSAN008100 chromosome, complete genome	2	2608687-2609271	1	CRT	no	RT	csa3,WYL,DinG,cas3,DEDDh,RT,casR	Unclear	CATATNAGTTACTGAACTNGTATCAAAATTACTTACATC	39	0	0	NA	NA	NA	7	7	Orphan	csa3,WYL,DinG,cas3,DEDDh,RT,casR,cas5	NA|89aa|up_4|NZ_CP045749.1_2604246_2604513_-,NA|162aa|up_2|NZ_CP045749.1_2604921_2605407_-,NA|158aa|up_1|NZ_CP045749.1_2605426_2605900_-,NA	NA|122aa|up_9|NZ_CP045749.1_2598417_2598783_-	PRK13316, PRK13316, heme oxygenase IsdG	NA|160aa|up_8|NZ_CP045749.1_2598940_2599420_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|368aa|up_7|NZ_CP045749.1_2599509_2600613_-	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional	NA|567aa|up_6|NZ_CP045749.1_2600763_2602464_-	COG4716, COG4716, Myosin-crossreactive antigen [Function unknown]	NA|187aa|up_5|NZ_CP045749.1_2602573_2603134_-	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region	NA|89aa|up_4|NZ_CP045749.1_2604246_2604513_-	NA	NA|102aa|up_3|NZ_CP045749.1_2604588_2604894_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|162aa|up_2|NZ_CP045749.1_2604921_2605407_-	NA	NA|158aa|up_1|NZ_CP045749.1_2605426_2605900_-	NA	NA|586aa|up_0|NZ_CP045749.1_2605965_2607723_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|668aa|down_0|NZ_CP045749.1_2610063_2612067_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|513aa|down_1|NZ_CP045749.1_2612330_2613869_-	pfam05043, Mga, Mga helix-turn-helix domain	NA|517aa|down_2|NZ_CP045749.1_2614502_2616053_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|367aa|down_3|NZ_CP045749.1_2616045_2617146_-	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|428aa|down_4|NZ_CP045749.1_2617146_2618430_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|532aa|down_5|NZ_CP045749.1_2618564_2620160_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|316aa|down_6|NZ_CP045749.1_2620315_2621263_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|383aa|down_7|NZ_CP045749.1_2621267_2622416_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|720aa|down_8|NZ_CP045749.1_2622412_2624572_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|252aa|down_9|NZ_CP045749.1_2624688_2625444_+	pfam16160, DUF4866, Domain of unknown function (DUF4866)
