The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045748	Listeria monocytogenes strain CFSAN023464 chromosome, complete genome	2939705	396425	454988	2939705	protease,tRNA	Streptococcus_phage(16.67%)	57	NA	NA
WP_003726416.1|396425_398132_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010958886.1|398172_399435_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_003726414.1|399448_400591_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003727496.1|400605_401394_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003727497.1|401407_402166_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003723450.1|402396_402954_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003723449.1|402953_403682_-	UMP kinase	NA	NA	NA	NA	NA
WP_003727498.1|403974_404349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012681273.1|404326_405532_+	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
WP_003731336.1|405521_406826_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	1.2e-133
WP_003726669.1|406835_407342_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003726668.1|407363_408095_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726667.1|408143_408383_-	YneF family protein	NA	NA	NA	NA	NA
WP_003734516.1|408603_410598_-	transketolase	NA	NA	NA	NA	NA
WP_003727501.1|410744_410972_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003727502.1|411066_411396_-	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723438.1|411551_412166_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003734519.1|412196_412721_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010958885.1|412754_414050_-	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	1.1e-147
WP_003723435.1|414193_415528_-	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003719570.1|415598_415967_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003727505.1|416168_417395_-	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_074467458.1|417387_418611_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003719566.1|418721_418955_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_003726658.1|419076_419994_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003723738.1|420120_421797_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726657.1|422029_422728_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_003727507.1|422940_424827_+	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
WP_048666914.1|424859_426644_-	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003726814.1|427271_427739_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_003734522.1|427821_430281_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003727510.1|430277_432245_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_003727511.1|432425_432833_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_003726698.1|432990_433587_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003726697.1|433628_434501_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724130.1|434503_434815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003727513.1|434837_435257_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003726695.1|435359_436139_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_048666912.1|436159_437569_-|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	5.8e-44
WP_003724001.1|437582_438122_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003731303.1|438142_439045_-	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003726401.1|439327_440632_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003727517.1|440694_442773_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003727518.1|443045_443906_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727519.1|444039_444825_-	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003726396.1|444821_445685_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727520.1|445694_446237_-	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726394.1|446338_446908_-	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003726393.1|446942_447509_-	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723886.1|447627_448887_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723884.1|449071_450355_-	trigger factor	NA	NA	NA	NA	NA
WP_003727521.1|450469_451408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003731300.1|451669_452335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003727523.1|452350_452884_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003727524.1|453007_453223_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003723563.1|453373_453769_+	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003734523.1|453848_454988_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP045748	Listeria monocytogenes strain CFSAN023464 chromosome, complete genome	2939705	1608385	1614912	2939705	tail	Streptococcus_pyogenes_phage(33.33%)	10	NA	NA
WP_003728210.1|1608385_1609204_-|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	9.4e-39
WP_048666707.1|1609200_1611069_-	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003740367.1|1611055_1611460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003721745.1|1611501_1611804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003721744.1|1611851_1612364_-|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003728212.1|1612376_1612766_-	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003724947.1|1613045_1613462_-	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
WP_003724946.1|1613473_1613902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003721740.1|1614118_1614454_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003728215.1|1614459_1614912_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
>prophage 3
NZ_CP045748	Listeria monocytogenes strain CFSAN023464 chromosome, complete genome	2939705	2142912	2150757	2939705		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722610.1|2142912_2143872_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
WP_003725411.1|2143991_2144975_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003741152.1|2144991_2146053_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725409.1|2146094_2147825_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
WP_003722606.1|2147932_2148808_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003734495.1|2148809_2149778_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.6	1.8e-68
WP_003725407.1|2149785_2150757_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
>prophage 4
NZ_CP045748	Listeria monocytogenes strain CFSAN023464 chromosome, complete genome	2939705	2836676	2844962	2939705		Synechococcus_phage(33.33%)	8	NA	NA
WP_003729814.1|2836676_2837969_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
WP_048667022.1|2838049_2838763_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	1.5e-40
WP_003722248.1|2838774_2839020_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003726212.1|2839023_2839707_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_009918191.1|2839699_2841919_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
WP_003722245.1|2841903_2843331_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_003726210.1|2843349_2844399_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003726209.1|2844395_2844962_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
