The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045747	Listeria monocytogenes strain CFSAN023465 chromosome, complete genome	2939729	768595	825411	2939729	protease,tRNA	Bacillus_virus(16.67%)	56	NA	NA
WP_003734523.1|768595_769735_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|769814_770210_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|770360_770576_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|770699_771233_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003731300.1|771248_771914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003727521.1|772175_773114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|773228_774512_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|774696_775956_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003726393.1|776074_776641_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|776675_777245_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|777346_777889_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|777898_778762_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|778758_779544_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003727518.1|779677_780538_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|780810_782889_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003726401.1|782951_784256_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003731303.1|784538_785441_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|785461_786001_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_048666912.1|786014_787424_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	5.8e-44
WP_003726695.1|787444_788224_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003727513.1|788326_788746_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|788768_789080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|789082_789955_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003726698.1|789996_790593_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003727511.1|790750_791158_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|791338_793306_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_003734522.1|793302_795762_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003726814.1|795844_796312_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_048666914.1|796939_798724_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003727507.1|798756_800643_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
WP_003726657.1|800855_801554_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_003723738.1|801786_803463_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|803589_804507_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|804628_804862_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_074467458.1|804972_806196_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|806188_807415_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|807616_807985_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|808055_809390_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_010958885.1|809533_810829_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	1.1e-147
WP_003734519.1|810862_811387_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|811417_812032_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003727502.1|812187_812517_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003727501.1|812611_812839_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|812985_814980_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|815200_815440_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|815488_816220_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|816241_816748_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003731336.1|816757_818062_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	1.2e-133
WP_012681273.1|818051_819257_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
WP_003727498.1|819234_819609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|819901_820630_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|820629_821187_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003727497.1|821417_822176_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003727496.1|822189_822978_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003726414.1|822992_824135_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010958886.1|824148_825411_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 2
NZ_CP045747	Listeria monocytogenes strain CFSAN023465 chromosome, complete genome	2939729	2012558	2020403	2939729		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2012558_2013530_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003734495.1|2013537_2014506_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.6	1.8e-68
WP_003722606.1|2014507_2015383_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003725409.1|2015490_2017221_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
WP_003741152.1|2017262_2018324_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2018340_2019324_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2019443_2020403_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 3
NZ_CP045747	Listeria monocytogenes strain CFSAN023465 chromosome, complete genome	2939729	2548403	2554930	2939729	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003728215.1|2548403_2548856_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|2548861_2549197_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003724946.1|2549413_2549842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724947.1|2549853_2550270_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
WP_003728212.1|2550549_2550939_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|2550951_2551464_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|2551511_2551814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003740367.1|2551855_2552260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048666707.1|2552246_2554115_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003728210.1|2554111_2554930_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	9.4e-39
