assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009601745.1_ASM960174v1	NZ_CP045694	Klebsiella pneumoniae strain TK421 chromosome, complete genome	1	466870-466948	1	CRISPRCasFinder	no		cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	Orphan	ATTTTTAAAATAATTCTTGACGAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	NA,NA|173aa|down_1|NZ_CP045694.1_467241_467760_+,NA|117aa|down_3|NZ_CP045694.1_470493_470844_-,NA|86aa|down_4|NZ_CP045694.1_470843_471101_-,NA|99aa|down_5|NZ_CP045694.1_471090_471387_-,NA|99aa|down_6|NZ_CP045694.1_471392_471689_-,NA|83aa|down_8|NZ_CP045694.1_472256_472505_-	NA|181aa|up_9|NZ_CP045694.1_450840_451383_+	COG0551, TopA, Zn-finger domain associated with topoisomerase type I [DNA replication, recombination, and repair]	NA|191aa|up_8|NZ_CP045694.1_451387_451960_+	PRK10634, PRK10634, L-threonylcarbamoyladenylate synthase type 1 TsaC	NA|273aa|up_7|NZ_CP045694.1_451963_452782_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|86aa|up_6|NZ_CP045694.1_452778_453036_+	pfam07369, DUF1488, Protein of unknown function (DUF1488)	NA|185aa|up_5|NZ_CP045694.1_453011_453566_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]	NA|74aa|up_4|NZ_CP045694.1_459540_459762_-	COG5633, COG5633, Predicted periplasmic lipoprotein [General function prediction only]	NA|1037aa|up_3|NZ_CP045694.1_460054_463165_-	PRK15127, PRK15127, multidrug efflux RND transporter permease subunit AcrB	NA|380aa|up_2|NZ_CP045694.1_463177_464317_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|217aa|up_1|NZ_CP045694.1_464695_465346_+	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|407aa|up_0|NZ_CP045694.1_465619_466840_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|63aa|down_0|NZ_CP045694.1_467019_467208_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|173aa|down_1|NZ_CP045694.1_467241_467760_+	NA	NA|867aa|down_2|NZ_CP045694.1_467809_470410_-	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain	NA|117aa|down_3|NZ_CP045694.1_470493_470844_-	NA	NA|86aa|down_4|NZ_CP045694.1_470843_471101_-	NA	NA|99aa|down_5|NZ_CP045694.1_471090_471387_-	NA	NA|99aa|down_6|NZ_CP045694.1_471392_471689_-	NA	NA|193aa|down_7|NZ_CP045694.1_471681_472260_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|83aa|down_8|NZ_CP045694.1_472256_472505_-	NA	NA|783aa|down_9|NZ_CP045694.1_473064_475413_+	COG4983, COG4983, Uncharacterized conserved protein [Function unknown]
GCF_009601745.1_ASM960174v1	NZ_CP045694	Klebsiella pneumoniae strain TK421 chromosome, complete genome	2	1151867-1153421	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	Type I-E	AGAGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	32,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	22,25,25,22	25	TypeI-E	cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	NA,NA	NA|571aa|up_9|NZ_CP045694.1_1140577_1142290_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP045694.1_1142388_1143123_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|888aa|up_7|NZ_CP045694.1_1143329_1145993_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|NZ_CP045694.1_1146004_1147561_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|181aa|up_5|NZ_CP045694.1_1147557_1148100_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP045694.1_1148118_1149174_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP045694.1_1149184_1149931_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP045694.1_1149912_1150563_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP045694.1_1150559_1151480_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP045694.1_1151479_1151773_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|674aa|down_0|NZ_CP045694.1_1153501_1155523_-	cd18422, BTB_POZ_KCNG3, BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily G member 3 (KCNG3)	NA|396aa|down_1|NZ_CP045694.1_1155509_1156697_-	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|352aa|down_2|NZ_CP045694.1_1156732_1157788_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|472aa|down_3|NZ_CP045694.1_1158025_1159441_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_4|NZ_CP045694.1_1159450_1160359_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_5|NZ_CP045694.1_1160368_1161796_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_6|NZ_CP045694.1_1161795_1162401_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_7|NZ_CP045694.1_1162451_1162778_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_8|NZ_CP045694.1_1162918_1163236_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_9|NZ_CP045694.1_1163255_1163966_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase
GCF_009601745.1_ASM960174v1	NZ_CP045694	Klebsiella pneumoniae strain TK421 chromosome, complete genome	3	4448729-4448823	3	CRISPRCasFinder	no		cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,DinG,WYL	NA,NA	NA|256aa|up_9|NZ_CP045694.1_4434048_4434816_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|282aa|up_8|NZ_CP045694.1_4434944_4435790_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|570aa|up_7|NZ_CP045694.1_4436127_4437837_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP045694.1_4437847_4439350_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP045694.1_4439487_4440183_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP045694.1_4440358_4442716_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP045694.1_4442903_4445810_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP045694.1_4445822_4446482_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP045694.1_4446556_4447096_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP045694.1_4447275_4448640_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP045694.1_4448964_4450590_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP045694.1_4450579_4451278_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP045694.1_4451310_4452138_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP045694.1_4452381_4454730_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP045694.1_4454784_4456071_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP045694.1_4456076_4457066_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP045694.1_4457062_4457884_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP045694.1_4457886_4458264_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP045694.1_4458268_4459117_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP045694.1_4459368_4459848_-	PRK10769, folA, type 3 dihydrofolate reductase
