assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009577985.1_ASM957798v1	NZ_CP041337	Escherichia coli strain CCUG 73778 chromosome, complete genome	1	1099250-1099373	1	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	NA,NA|30aa|down_7|NZ_CP041337.1_1108269_1108359_+	NA|471aa|up_9|NZ_CP041337.1_1088702_1090115_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP041337.1_1090671_1090881_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP041337.1_1091336_1091963_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP041337.1_1091983_1094086_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP041337.1_1094089_1094737_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP041337.1_1094800_1095469_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP041337.1_1095465_1096251_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP041337.1_1096254_1097067_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP041337.1_1097078_1098683_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP041337.1_1098808_1099114_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP041337.1_1099687_1100944_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP041337.1_1100984_1102358_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP041337.1_1102572_1103214_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP041337.1_1103253_1104402_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP041337.1_1104692_1105904_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP041337.1_1106016_1106949_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP041337.1_1106945_1107971_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP041337.1_1108269_1108359_+	NA	NA|390aa|down_8|NZ_CP041337.1_1108524_1109694_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP041337.1_1109839_1110421_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_009577985.1_ASM957798v1	NZ_CP041337	Escherichia coli strain CCUG 73778 chromosome, complete genome	2	1775985-1776076	2	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	NA|70aa|up_9|NZ_CP041337.1_1765235_1765445_-,NA	NA|70aa|up_9|NZ_CP041337.1_1765235_1765445_-	NA	NA|1321aa|up_8|NZ_CP041337.1_1765499_1769462_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP041337.1_1769501_1770140_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP041337.1_1770427_1771519_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP041337.1_1771518_1772211_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP041337.1_1772222_1772609_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP041337.1_1772616_1773417_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP041337.1_1773426_1774017_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP041337.1_1774027_1774522_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP041337.1_1774542_1775871_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP041337.1_1776499_1777096_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP041337.1_1777116_1777344_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP041337.1_1777381_1778623_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP041337.1_1779157_1780078_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP041337.1_1780077_1780383_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP041337.1_1780637_1781237_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP041337.1_1781233_1783780_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP041337.1_1783779_1784952_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP041337.1_1785081_1785774_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP041337.1_1785746_1786775_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_009577985.1_ASM957798v1	NZ_CP041337	Escherichia coli strain CCUG 73778 chromosome, complete genome	3	2009725-2009807	3	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	Orphan	ATCTGCCTGTACGGCAGTGAACT	23	0	0	NA	NA	I-F	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,RT,csa3	NA,NA	NA|431aa|up_9|NZ_CP041337.1_1994722_1996015_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP041337.1_1996105_1997449_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP041337.1_1997459_1998071_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|NZ_CP041337.1_1998229_2002336_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP041337.1_2002470_2002965_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP041337.1_2003508_2004474_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP041337.1_2004596_2006363_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP041337.1_2006363_2008085_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP041337.1_2008126_2008831_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP041337.1_2009115_2009334_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP041337.1_2010018_2012295_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP041337.1_2012325_2012646_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP041337.1_2012968_2013193_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP041337.1_2013265_2015212_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP041337.1_2015208_2016324_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP041337.1_2016474_2017431_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP041337.1_2017427_2019086_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP041337.1_2019510_2020206_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP041337.1_2020620_2021520_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP041337.1_2021663_2023316_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
