The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP043498	Rhizobium grahamii strain BG7 chromosome, complete genome	3927797	577445	606194	3927797	capsid,tail,transposase,protease,head,portal	Ectocarpus_siliculosus_virus(12.5%)	33	NA	NA
WP_153269837.1|577445_577865_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153269838.1|577861_578665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113363311.1|578669_579092_-	SufE family protein	NA	NA	NA	NA	NA
WP_153269839.1|579297_579801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153269840.1|580260_581793_+	two-component sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	34.4	5.0e-25
WP_153269841.1|581764_582694_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_153269842.1|582752_583109_+	DUF1491 family protein	NA	NA	NA	NA	NA
WP_153269843.1|584339_584546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153269844.1|585236_585791_-	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_153269845.1|585783_586371_-	DUF1214 domain-containing protein	NA	NA	NA	NA	NA
WP_153269846.1|586477_588613_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_153272346.1|588800_589289_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_153269847.1|589296_589842_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_153269848.1|589945_590860_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_113363323.1|590866_591211_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_153269849.1|591451_592477_-	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_153269850.1|592457_593030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153272347.1|593326_594499_+	DNA-packaging protein	NA	A0A0K1LMR9	Caulobacter_phage	42.8	2.0e-74
WP_153269851.1|594785_595472_+	hypothetical protein	NA	G8DCR5	Silicibacter_phage	45.9	2.5e-37
WP_153269852.1|595492_595801_+	Dabb family protein	NA	NA	NA	NA	NA
WP_153269853.1|596207_596681_+	VOC family protein	NA	NA	NA	NA	NA
WP_153269854.1|596836_598093_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	1.3e-18
WP_153269855.1|598200_599358_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	39.7	2.8e-65
WP_153269856.1|599482_600061_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A2K9L3J9	Tupanvirus	29.8	9.0e-20
WP_037134447.1|600245_600563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113363361.1|600631_601183_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JAI0	uncultured_Caudovirales_phage	44.4	3.9e-28
WP_153269857.1|601194_602451_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	44.7	4.2e-86
WP_153269858.1|602525_603095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153269859.1|603094_603430_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_153269860.1|603529_603949_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_153269861.1|603953_604346_-	GFA family protein	NA	NA	NA	NA	NA
WP_153272348.1|604443_605658_-	MFS transporter	NA	NA	NA	NA	NA
WP_153269862.1|605786_606194_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
>prophage 2
NZ_CP043498	Rhizobium grahamii strain BG7 chromosome, complete genome	3927797	1101552	1113704	3927797	tRNA	uncultured_Mediterranean_phage(80.0%)	12	NA	NA
WP_153270243.1|1101552_1102413_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.6	2.1e-33
WP_153270244.1|1102409_1103132_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.2	3.1e-41
WP_113361613.1|1103318_1103513_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	1.2e-08
WP_153270245.1|1103561_1104254_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_153270246.1|1104250_1105078_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.6	1.7e-43
WP_153270247.1|1105176_1106460_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.6	3.8e-95
WP_153270248.1|1106465_1107233_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	31.0	8.9e-23
WP_153270249.1|1107239_1107893_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	30.4	2.1e-09
WP_153270250.1|1108027_1109590_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0Y0AH42	Bacillus_phage	30.1	3.1e-06
WP_153270251.1|1109666_1110539_-	DUF815 domain-containing protein	NA	NA	NA	NA	NA
WP_056819867.1|1110746_1111094_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	37.0	2.7e-11
WP_153270252.1|1111148_1113704_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	45.8	4.5e-55
>prophage 3
NZ_CP043498	Rhizobium grahamii strain BG7 chromosome, complete genome	3927797	1547060	1587715	3927797	capsid,tail,protease,tRNA,head,integrase,portal	Streptococcus_phage(28.57%)	45	1568729:1568744	1581740:1581755
WP_153270575.1|1547060_1547762_+|protease	TIGR02281 family clan AA aspartic protease	protease	NA	NA	NA	NA
WP_153270576.1|1547963_1549427_+	4-amino-4-deoxy-L-arabinose transferase	NA	NA	NA	NA	NA
WP_113365162.1|1549489_1550251_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_153270577.1|1550247_1551174_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.2	2.3e-25
WP_153270578.1|1551342_1552644_-	extensin	NA	NA	NA	NA	NA
WP_153270579.1|1552803_1554207_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_153270580.1|1554343_1554577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153270581.1|1555008_1556670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153270582.1|1556703_1557780_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_153272389.1|1557809_1558529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_113365169.1|1558880_1559267_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_153270583.1|1559270_1559858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113365171.1|1559928_1560375_+	vanillate O-demethylase oxidoreductase VanB	NA	NA	NA	NA	NA
WP_153270584.1|1560418_1560700_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153270585.1|1560701_1561874_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_153270586.1|1561922_1563368_-	DUF1800 family protein	NA	NA	NA	NA	NA
WP_113365175.1|1563479_1563833_-	DMT family protein	NA	NA	NA	NA	NA
WP_153270587.1|1564052_1565264_+	MFS transporter	NA	NA	NA	NA	NA
WP_153270588.1|1565319_1565955_-	DUF2272 domain-containing protein	NA	NA	NA	NA	NA
WP_153270589.1|1566167_1567415_-	MFS transporter	NA	NA	NA	NA	NA
WP_153270590.1|1567577_1567904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153270591.1|1567918_1568578_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_153270592.1|1568624_1569071_-	VOC family protein	NA	NA	NA	NA	NA
1568729:1568744	attL	CGAGACGCGCGCCGCG	NA	NA	NA	NA
WP_153272390.1|1572472_1572763_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_153270593.1|1572943_1574155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153270594.1|1574142_1574685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153270595.1|1575382_1575817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007533154.1|1576192_1576405_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	57.1	1.1e-12
WP_153270596.1|1576849_1577869_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_153270597.1|1577981_1579064_+|integrase	tyrosine-type recombinase/integrase	integrase	I6NSG1	Burkholderia_phage	57.3	4.2e-111
WP_153270598.1|1579164_1579386_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_153270599.1|1579382_1579574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153270600.1|1579593_1579881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153272391.1|1580065_1581067_+	AAA family ATPase	NA	A0A2R4A1S8	Microbacterium_phage	27.1	2.6e-06
WP_153270601.1|1581180_1581375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153270602.1|1581371_1581827_+	hypothetical protein	NA	NA	NA	NA	NA
1581740:1581755	attR	CGAGACGCGCGCCGCG	NA	NA	NA	NA
WP_153270603.1|1582507_1582936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153270604.1|1582935_1584156_+|portal	phage portal protein	portal	A0A1B0RXK4	Streptococcus_phage	36.6	3.6e-42
WP_153270605.1|1584043_1584520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153270606.1|1584506_1585040_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0R6PKF0	Moraxella_phage	52.4	8.6e-33
WP_153270607.1|1585036_1586170_+|capsid	phage major capsid protein	capsid	Q6DMU0	Streptococcus_phage	31.9	6.9e-40
WP_153270608.1|1586242_1586623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153272392.1|1586627_1586966_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_153270609.1|1586958_1587231_-	CRISPR-associated protein Cas2	NA	NA	NA	NA	NA
WP_153270610.1|1587415_1587715_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
