The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	768545	776466	2846134	transposase	Planktothrix_phage(16.67%)	11	NA	NA
WP_002355794.1|768545_769604_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
WP_002361357.1|769603_770560_+	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	4.2e-06
WP_002355796.1|770600_771671_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002355797.1|772070_772592_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355798.1|772705_772906_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355799.1|772966_773326_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002363280.1|773372_773723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002361363.1|773820_774180_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002361364.1|774307_774742_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002378095.1|774759_775275_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	49.1	7.7e-39
WP_002378096.1|775290_776466_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	48.0	5.1e-86
>prophage 2
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1140589	1158360	2846134	holin,tail	Enterococcus_phage(42.86%)	21	NA	NA
WP_002357859.1|1140589_1142986_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
WP_002360497.1|1143010_1143361_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002401530.1|1143443_1143674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357857.1|1143733_1144207_-	toxin	NA	A0A097BY56	Enterococcus_phage	71.2	1.1e-60
WP_002361687.1|1144253_1144736_-	helix-turn-helix transcriptional regulator	NA	R9QTP6	Staphylococcus_phage	48.6	1.5e-20
WP_073459191.1|1144904_1145087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002401529.1|1145212_1145887_+	DnaD domain protein	NA	A0A1X9I617	Streptococcus_phage	32.7	9.5e-21
WP_002378242.1|1145905_1146748_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.3	1.4e-29
WP_010706586.1|1146750_1146843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002388056.1|1146835_1147207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360491.1|1147226_1147634_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010710173.1|1147879_1148272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378245.1|1148284_1148797_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	3.0e-35
WP_002377707.1|1148829_1149189_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_002378246.1|1149206_1149575_+	hypothetical protein	NA	A0A1P8BLR3	Lactococcus_phage	39.7	3.5e-09
WP_002401527.1|1149564_1152498_+	hypothetical protein	NA	A0A1U9WR55	Streptococcus_virus	25.1	2.8e-08
WP_002378247.1|1152499_1153426_+|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	4.1e-147
WP_002378248.1|1153438_1154896_+	hypothetical protein	NA	C9E2K6	Enterococcus_phage	47.5	9.5e-175
WP_002378249.1|1154928_1156698_+	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	62.2	1.2e-142
WP_002357842.1|1156721_1157117_+|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_010710174.1|1157262_1158360_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	44.3	1.5e-76
>prophage 3
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1579763	1588407	2846134		Synechococcus_phage(50.0%)	9	NA	NA
WP_002360141.1|1579763_1580336_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	3.2e-25
WP_002360140.1|1580332_1581364_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	44.4	8.2e-56
WP_002401381.1|1581365_1582805_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.2	1.6e-49
WP_002378402.1|1582780_1585000_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	9.7e-147
WP_002357272.1|1584996_1585671_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002357271.1|1585671_1585923_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002357270.1|1585936_1586650_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3ELR0	Synechococcus_phage	43.0	4.3e-48
WP_002397378.1|1586801_1587926_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002378405.1|1587918_1588407_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	8.4e-19
>prophage 4
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1737707	1778048	2846134	portal,terminase,plate,holin,tRNA,head,tail	Enterococcus_phage(31.25%)	47	NA	NA
WP_002360034.1|1737707_1739477_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L424	Tupanvirus	30.3	3.0e-13
WP_002362049.1|1739494_1740796_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.8	8.8e-23
WP_074652979.1|1740792_1741041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002378438.1|1741153_1741600_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002357079.1|1741623_1743837_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.0	1.3e-10
WP_002378439.1|1744051_1744804_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_002371999.1|1744805_1745753_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002388170.1|1745768_1746254_-	DUF3013 family protein	NA	NA	NA	NA	NA
WP_002383132.1|1746210_1746900_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_002360030.1|1747016_1748294_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.9	1.8e-105
WP_002357068.1|1748567_1748900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357065.1|1749215_1749689_+	universal stress protein	NA	NA	NA	NA	NA
WP_002357064.1|1749800_1750988_-	acetate kinase	NA	NA	NA	NA	NA
WP_002357063.1|1751012_1752020_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_094467184.1|1752148_1752502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002378441.1|1752501_1752936_-	ComGF family competence protein	NA	NA	NA	NA	NA
WP_002370967.1|1752925_1753252_-	type II secretion system protein	NA	NA	NA	NA	NA
WP_002357058.1|1753630_1753756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357056.1|1754053_1754995_-	ferrochelatase	NA	NA	NA	NA	NA
WP_002389159.1|1755710_1755956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357053.1|1756054_1756255_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	80.3	1.6e-24
WP_002370962.1|1757091_1758333_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	71.7	6.6e-169
WP_002384371.1|1758333_1758567_-|holin	phage holin	holin	D2J020	Enterococcus_phage	87.8	1.9e-29
WP_002364191.1|1758559_1758781_-	hypothetical protein	NA	D2J019	Enterococcus_phage	93.2	2.5e-31
WP_002364192.1|1758815_1758971_-	XkdX family protein	NA	A0A1W6JQ64	Staphylococcus_phage	55.6	7.2e-09
WP_002389262.1|1758972_1759293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364194.1|1759306_1759798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357046.1|1759797_1760085_-	collagen-like protein	NA	NA	NA	NA	NA
WP_002357045.1|1760081_1760678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357044.1|1760670_1761552_-|plate	phage baseplate upper protein	plate	Q9AYV5	Lactococcus_phage	28.6	5.1e-14
WP_002389156.1|1761570_1764363_-	CHAP domain-containing protein	NA	Q9AZX5	Lactococcus_phage	38.7	1.8e-145
WP_002357042.1|1764359_1765094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010729979.1|1765083_1768008_-	tape measure protein	NA	D7RWD8	Brochothrix_phage	46.9	1.6e-80
WP_002370959.1|1768228_1768579_-	hypothetical protein	NA	A0A2H4JAA8	uncultured_Caudovirales_phage	33.3	2.9e-05
WP_002384363.1|1768631_1769480_-|tail	tail protein	tail	A0A288TYF3	Enterococcus_phage	42.5	3.2e-05
WP_002357037.1|1769480_1769855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357036.1|1769857_1770256_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_002357034.1|1770248_1770617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357033.1|1770613_1770958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357032.1|1770971_1771154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357030.1|1771182_1772070_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002389133.1|1772083_1772707_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_002389265.1|1772924_1773245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357027.1|1773309_1773531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002384360.1|1773527_1775285_-|head	head protein	head	NA	NA	NA	NA
WP_002384358.1|1775259_1776747_-|portal	phage portal protein	portal	A0A0A7AQF2	Bacillus_phage	25.7	2.5e-29
WP_002403123.1|1776758_1778048_-|terminase	PBSX family phage terminase large subunit	terminase	D2J001	Enterococcus_phage	94.9	1.5e-232
>prophage 5
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1781995	1793589	2846134	integrase	Enterococcus_phage(80.0%)	21	1772477:1772490	1795390:1795403
1772477:1772490	attL	TTTCTTAGATTCTT	NA	NA	NA	NA
WP_010816133.1|1781995_1782412_-	ArpU family phage transcriptional regulator	NA	D2IZ17	Enterococcus_phage	97.8	1.2e-66
WP_002357017.1|1782779_1783040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002389212.1|1783318_1783744_-	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	95.7	3.1e-70
WP_002389080.1|1783761_1784061_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	89.9	8.7e-43
WP_002389299.1|1784061_1784364_-	hypothetical protein	NA	D2IZR3	Enterococcus_phage	99.0	1.6e-47
WP_002389256.1|1784367_1785369_-	DUF4373 domain-containing protein	NA	D2IZR2	Enterococcus_phage	57.5	4.9e-82
WP_002369907.1|1785405_1786299_-	hypothetical protein	NA	D2IYT9	Enterococcus_phage	99.7	5.1e-163
WP_002389314.1|1786298_1787243_-	endonuclease	NA	D2IZK1	Enterococcus_phage	99.7	3.8e-177
WP_010711676.1|1787239_1787341_-	hypothetical protein	NA	D2IYT7	Enterococcus_phage	100.0	3.2e-10
WP_002364220.1|1787340_1787568_-	hypothetical protein	NA	D2IZX4	Enterococcus_phage	97.3	8.6e-35
WP_002369793.1|1787567_1787891_-	hypothetical protein	NA	D2IYT5	Enterococcus_phage	87.9	2.6e-45
WP_002364222.1|1787934_1788120_-	hypothetical protein	NA	D2IZ58	Enterococcus_phage	94.7	3.6e-23
WP_002364223.1|1788110_1788305_-	hypothetical protein	NA	D2IZ57	Enterococcus_phage	90.6	1.9e-27
WP_002364224.1|1788357_1788540_+	YegP family protein	NA	NA	NA	NA	NA
WP_002389142.1|1789339_1789651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002356998.1|1789662_1789854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002385819.1|1790144_1790489_+	helix-turn-helix transcriptional regulator	NA	A0A141DZM2	Streptococcus_phage	45.2	6.8e-15
WP_002389292.1|1790501_1791140_+	ImmA/IrrE family metallo-endopeptidase	NA	S4U0J6	uncultured_phage	29.9	1.2e-12
WP_002364232.1|1791239_1792022_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002369911.1|1792036_1792366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002389015.1|1792440_1793589_+|integrase	site-specific integrase	integrase	A0A1C8E994	Bacillus_phage	30.4	1.7e-38
1795390:1795403	attR	TTTCTTAGATTCTT	NA	NA	NA	NA
>prophage 6
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1833644	1844778	2846134	holin	Enterococcus_phage(50.0%)	12	NA	NA
WP_002378488.1|1833644_1834715_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.1	3.0e-29
WP_002378489.1|1835745_1835952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002359996.1|1836193_1836442_+	hypothetical protein	NA	A0A097BYB1	Enterococcus_phage	91.5	6.1e-34
WP_002359995.1|1836460_1837429_-	Abi family protein	NA	A0A059NT88	Lactococcus_phage	43.5	1.3e-79
WP_002359994.1|1838239_1839226_-	endolysin	NA	F0PIJ7	Enterococcus_phage	67.6	4.7e-85
WP_002359993.1|1839212_1839491_-|holin	holin	holin	NA	NA	NA	NA
WP_002359992.1|1839490_1839745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359991.1|1839757_1840177_-	XkdX family protein	NA	F0PIJ5	Enterococcus_phage	85.4	1.1e-56
WP_011109518.1|1840164_1841022_-	collagen-like protein	NA	F0PIJ4	Enterococcus_phage	87.3	1.2e-60
WP_002359989.1|1841011_1841500_-	hypothetical protein	NA	A0A1W6JI16	Lactococcus_phage	46.0	8.4e-35
WP_011109519.1|1841512_1842202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359986.1|1842201_1844778_-	endolysin	NA	A0A1B1IM47	Lactococcus_phage	46.6	1.3e-30
>prophage 7
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	1863046	1876744	2846134		Enterococcus_phage(57.89%)	31	NA	NA
WP_002393641.1|1863046_1863466_-	hypothetical protein	NA	A0A2H4J1L3	uncultured_Caudovirales_phage	50.0	1.0e-17
WP_002399577.1|1863455_1864658_-	adenine methyltransferase	NA	Q708N6	Streptococcus_phage	50.8	3.9e-110
WP_002359961.1|1865065_1865491_-	ArpU family transcriptional regulator	NA	D2IYV6	Enterococcus_phage	42.3	7.6e-24
WP_002399396.1|1865636_1865762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359960.1|1865789_1865990_-	hypothetical protein	NA	D2IYV2	Enterococcus_phage	83.3	1.6e-24
WP_002399578.1|1866003_1866558_-	DUF3850 domain-containing protein	NA	C9E2N9	Enterococcus_phage	55.1	5.7e-48
WP_010714055.1|1866557_1866875_-	hypothetical protein	NA	F0PIH9	Enterococcus_phage	60.6	3.8e-28
WP_002399580.1|1867042_1867585_-	hypothetical protein	NA	A0A0S2MYC7	Enterococcus_phage	95.7	4.6e-42
WP_002399581.1|1867609_1867834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399582.1|1867820_1867940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399583.1|1867923_1868136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011109521.1|1868213_1868696_-	class I SAM-dependent methyltransferase	NA	D2IYU6	Enterococcus_phage	90.3	4.8e-83
WP_002399585.1|1868751_1868922_-	hypothetical protein	NA	D2IYU5	Enterococcus_phage	78.4	3.6e-09
WP_153246789.1|1868842_1869019_-	hypothetical protein	NA	D2IYU4	Enterococcus_phage	93.6	4.1e-16
WP_010714057.1|1869002_1869353_-	hypothetical protein	NA	A0A2L0V129	Agrobacterium_phage	41.6	1.1e-12
WP_002399587.1|1869364_1869697_-	hypothetical protein	NA	A0A0S2MYB8	Enterococcus_phage	58.4	2.1e-21
WP_002399588.1|1869693_1870119_-	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	80.4	1.2e-58
WP_002399589.1|1870127_1870997_-	DNA replication protein	NA	U5PWH5	Bacillus_phage	29.1	6.1e-20
WP_010714058.1|1871010_1871862_-	DUF4373 domain-containing protein	NA	D2IZY0	Enterococcus_phage	45.1	1.7e-46
WP_010711084.1|1871875_1872688_-	hypothetical protein	NA	J7KGZ1	Streptococcus_phage	50.4	7.1e-63
WP_002399592.1|1872653_1873577_-	recombinase RecT	NA	Q708Q2	Streptococcus_phage	53.8	1.0e-65
WP_010706514.1|1873566_1873899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399594.1|1873921_1874212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399595.1|1874296_1874623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359948.1|1874623_1874833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010706515.1|1874851_1874962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359946.1|1874975_1875227_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002399596.1|1875241_1875769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399597.1|1875826_1876024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011109523.1|1876013_1876226_-	helix-turn-helix transcriptional regulator	NA	A0A290G4F8	Caldibacillus_phage	42.4	9.3e-07
WP_002399599.1|1876384_1876744_+	helix-turn-helix transcriptional regulator	NA	A8ATJ9	Listeria_phage	45.0	2.8e-19
>prophage 8
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	2236923	2318262	2846134	portal,protease,terminase,holin,tRNA,capsid,tail	Enterococcus_phage(27.08%)	92	NA	NA
WP_002356529.1|2236923_2237577_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002356528.1|2237619_2238270_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002365037.1|2238483_2240430_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.1	4.2e-53
WP_002356525.1|2240444_2241077_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356523.1|2241259_2242468_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.4	1.1e-27
WP_002356521.1|2242460_2244170_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002388394.1|2244453_2245164_-	DUF697 domain-containing protein	NA	NA	NA	NA	NA
WP_002356519.1|2245307_2246210_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_002356518.1|2246332_2247346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002356517.1|2247487_2248636_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	36.7	6.8e-43
WP_002359581.1|2248657_2249950_-	GntP family permease	NA	NA	NA	NA	NA
WP_002362276.1|2250059_2250743_-	TVP38/TMEM64 family protein	NA	NA	NA	NA	NA
WP_002362278.1|2250892_2251966_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002415314.1|2251962_2252799_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002356510.1|2252798_2253605_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	24.5	4.3e-12
WP_002356508.1|2253623_2254709_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	42.6	7.6e-36
WP_002356507.1|2254734_2255277_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002356506.1|2255540_2256533_+	YhdH/YhfP family quinone oxidoreductase	NA	NA	NA	NA	NA
WP_002359575.1|2256548_2257322_+	phosphopantothenate--cysteine ligase	NA	Q9HH70	Methanothermobacter_phage	31.0	3.4e-14
WP_002359573.1|2257318_2257873_+	phosphopantothenoylcysteine decarboxylase	NA	Q9J5A8	Fowlpox_virus	38.9	8.1e-26
WP_002356501.1|2257876_2258512_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002415313.1|2258568_2259774_-	aminoacyltransferase	NA	NA	NA	NA	NA
WP_002415312.1|2260011_2260518_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	28.4	5.0e-06
WP_002356498.1|2260780_2261740_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_002378609.1|2261806_2264416_-	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	34.9	3.0e-38
WP_002356494.1|2264442_2265087_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002356493.1|2265303_2265810_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_002362280.1|2266121_2266967_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002359565.1|2267096_2267726_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002362548.1|2267843_2269205_-	magnesium transporter	NA	NA	NA	NA	NA
WP_002362547.1|2269235_2270129_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_002356486.1|2270136_2270934_-	NAD kinase	NA	NA	NA	NA	NA
WP_002381475.1|2270946_2271651_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_002356483.1|2271817_2272396_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_002356482.1|2272459_2273119_+	DsbA family protein	NA	NA	NA	NA	NA
WP_002385714.1|2273401_2274097_-	helix-turn-helix transcriptional regulator	NA	A0A0A7AQV8	Bacillus_phage	44.2	8.9e-06
WP_002378614.1|2274311_2276123_-	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_002378616.1|2276170_2277349_-	competence protein ComA	NA	NA	NA	NA	NA
WP_002378617.1|2277437_2278100_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_002356477.1|2278442_2278841_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_002378619.1|2279200_2280211_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_099704253.1|2280253_2281591_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.1	5.3e-47
WP_002381470.1|2281699_2281948_+	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	97.6	2.2e-36
WP_010717112.1|2281984_2282470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010717113.1|2283192_2283408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153246797.1|2283463_2284570_-	N-acetylmuramoyl-L-alanine amidase	NA	V5URN7	Enterococcus_phage	47.6	7.6e-84
WP_010708635.1|2284623_2285022_-|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	54.2	1.6e-36
WP_048955604.1|2285071_2285875_-	hypothetical protein	NA	D2IYX9	Enterococcus_phage	83.5	1.5e-118
WP_048955603.1|2285886_2286942_-	structural protein	NA	D2J073	Enterococcus_phage	37.0	5.3e-50
WP_048955602.1|2286952_2288077_-	hypothetical protein	NA	Q77MU2	Lactococcus_phage	45.3	1.5e-87
WP_002358065.1|2288079_2288979_-|tail	phage tail family protein	tail	D2J071	Enterococcus_phage	37.4	3.8e-49
WP_153246798.1|2288978_2293727_-|tail	phage tail tape measure protein	tail	M1PKM6	Streptococcus_phage	45.7	4.1e-17
WP_010717120.1|2293948_2294296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010717121.1|2294351_2294825_-	Ig domain-containing protein	NA	A0A1D6Z291	Staphylococcus_phage	44.4	1.3e-21
WP_010708051.1|2294898_2295492_-|tail	tail protein	tail	A0A1S5SF75	Streptococcus_phage	30.1	2.2e-21
WP_002400736.1|2295524_2295944_-	hypothetical protein	NA	A0A059T681	Listeria_phage	44.2	5.2e-17
WP_010708049.1|2295940_2296333_-	hypothetical protein	NA	A0A1S5SF89	Streptococcus_phage	36.7	8.3e-09
WP_010717122.1|2296329_2296704_-	hypothetical protein	NA	A8ATA1	Listeria_phage	52.6	4.5e-28
WP_002358075.1|2296690_2296996_-	hypothetical protein	NA	A0A0U4K528	Bacillus_phage	47.5	1.3e-09
WP_010717123.1|2297073_2298219_-|capsid	phage major capsid protein	capsid	A8AT98	Listeria_phage	56.3	3.5e-116
WP_010717124.1|2298245_2299019_-|protease	Clp protease ClpP	protease	A0A2P0ZLE3	Lactobacillus_phage	49.6	7.5e-54
WP_010717125.1|2298990_2300166_-|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	42.0	1.7e-78
WP_002381454.1|2300381_2302022_-|terminase	terminase large subunit	terminase	A0A1S5SF58	Streptococcus_phage	59.0	7.4e-184
WP_010717127.1|2302018_2302372_-	hypothetical protein	NA	A0A2H4JAH7	uncultured_Caudovirales_phage	68.6	7.2e-36
WP_002396869.1|2302507_2302717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_113813636.1|2302707_2303019_-	HNH endonuclease	NA	A0A1S5SFB3	Streptococcus_phage	63.1	5.2e-30
WP_153246799.1|2303011_2303572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_113803333.1|2303572_2303887_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153246800.1|2303879_2304068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153246801.1|2304557_2305088_-	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	29.9	7.0e-11
WP_153246802.1|2305179_2305374_-	hypothetical protein	NA	A0A0S2MYB9	Enterococcus_phage	78.1	1.3e-23
WP_010717132.1|2305374_2305782_-	DUF1642 domain-containing protein	NA	A0A059T7S4	Listeria_phage	34.0	1.9e-11
WP_153246803.1|2305778_2306036_-	hypothetical protein	NA	D2IZE8	Enterococcus_phage	94.1	2.4e-41
WP_010826639.1|2306032_2306515_-	hypothetical protein	NA	A0A096XT70	Enterococcus_phage	44.9	6.8e-29
WP_153246804.1|2306511_2306928_-	DNA-packaging protein	NA	C9E2N7	Enterococcus_phage	70.3	4.9e-44
WP_153246805.1|2308218_2308524_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	84.8	2.1e-39
WP_002381444.1|2308544_2309000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359510.1|2308996_2309251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153246806.1|2309253_2309766_-	recombination protein U	NA	A0A2K9V2V4	Faecalibacterium_phage	42.8	6.3e-25
WP_153246807.1|2309755_2310076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359505.1|2310072_2310888_-	hypothetical protein	NA	Q0SPI6	Clostridium_phage	34.2	6.3e-27
WP_153246808.1|2311115_2311868_-	hypothetical protein	NA	A0A1S5S8N0	Streptococcus_phage	44.0	3.9e-47
WP_002382539.1|2311887_2312346_-	hypothetical protein	NA	A0A097BY30	Enterococcus_phage	45.4	3.7e-24
WP_002359502.1|2312402_2312678_-	hypothetical protein	NA	A0A0A7S062	Clostridium_phage	56.5	3.0e-13
WP_002381441.1|2312671_2312899_-	hypothetical protein	NA	D2IZX4	Enterococcus_phage	54.1	7.1e-13
WP_002400150.1|2312895_2313210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153246809.1|2313952_2314510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002399933.1|2314810_2315038_-	helix-turn-helix transcriptional regulator	NA	A0A097BYF3	Leuconostoc_phage	60.6	5.3e-16
WP_153246810.1|2315185_2315644_+	helix-turn-helix domain-containing protein	NA	A0A097BY95	Leuconostoc_phage	55.3	1.1e-25
WP_002359487.1|2315661_2316126_+	hypothetical protein	NA	R4IBK9	Listeria_phage	33.3	3.1e-15
WP_002359485.1|2316207_2316789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010717149.1|2316849_2318262_+	recombinase family protein	NA	D7RWL2	Brochothrix_phage	43.5	4.8e-99
>prophage 9
NZ_CP042213	Enterococcus faecalis strain L15 chromosome, complete genome	2846134	2386765	2396506	2846134		Streptococcus_phage(57.14%)	11	NA	NA
WP_002382497.1|2386765_2388949_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	4.0e-286
WP_002356379.1|2388981_2389578_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
WP_002362328.1|2389622_2390741_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002356377.1|2390866_2391625_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002378641.1|2391608_2392271_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	8.8e-19
WP_002359438.1|2392285_2393158_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
WP_002356372.1|2393270_2393618_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_002356371.1|2393610_2394450_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002384059.1|2394566_2395517_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
WP_002356367.1|2395518_2395848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002356366.1|2395867_2396506_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
>prophage 1
NZ_CP042214	Enterococcus faecalis strain L15 plasmid pL15, complete sequence	82898	25465	69758	82898	integrase,protease,bacteriocin,transposase	Streptococcus_phage(77.27%)	49	37613:37627	70892:70906
WP_104659728.1|25465_26152_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	5.0e-126
WP_094467209.1|26310_26850_+	PcfJ	NA	A8ATM0	Listeria_phage	36.8	3.6e-31
WP_002367698.1|27366_27717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002405219.1|27749_29435_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_002367696.1|29435_29792_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_002362409.1|30037_30310_-	LtrD	NA	NA	NA	NA	NA
WP_002362410.1|30342_32502_-	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
WP_001825268.1|32936_33056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000420682.1|33078_33393_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|33408_33795_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|33823_35209_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|35211_35364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|35386_36592_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|36634_36856_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|36972_37470_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|37444_37951_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
37613:37627	attL	TCTATCAATGATTTT	NA	NA	NA	NA
WP_094467208.1|37934_40382_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	99.8	0.0e+00
WP_001574271.1|40384_42562_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	85.6	2.4e-307
WP_033918023.1|42558_43560_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	99.4	7.2e-190
WP_001224319.1|43556_44489_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_011058339.1|44763_44850_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001574275.1|44865_46785_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	95.0	0.0e+00
WP_002294500.1|46978_48355_+	tetracycline efflux MFS transporter Tet(L)	NA	NA	NA	NA	NA
WP_002415230.1|49396_50044_+	type A chloramphenicol O-acetyltransferase	NA	A0A1X9I6V6	Streptococcus_phage	57.7	5.1e-72
WP_000119405.1|50333_51596_+	Plasmid recombination enzyme type 2	NA	NA	NA	NA	NA
WP_002394810.1|51516_52077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002362416.1|54042_54711_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002367743.1|54841_55852_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_000239313.1|56323_57169_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	42.5	3.1e-53
WP_002358205.1|57161_57533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814874.1|57964_58048_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001038795.1|58172_58910_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
WP_002326618.1|58914_59046_+	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	97.7	3.9e-16
WP_002367796.1|59738_60371_-	AbiV family abortive infection protein	NA	NA	NA	NA	NA
WP_002367795.1|60505_60802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012881081.1|61058_61145_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_002367793.1|61399_61918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002367792.1|62333_62675_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_002367791.1|62675_62891_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002367788.1|63060_63252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002367787.1|63263_63458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078122507.1|63817_64105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078122506.1|64121_64718_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	37.1	2.4e-20
WP_002362431.1|64945_65176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362432.1|65175_65517_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	40.9	6.1e-16
WP_002362433.1|65628_66567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362434.1|66831_67434_+	cell division protein Fic	NA	NA	NA	NA	NA
WP_094467193.1|67572_68710_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	53.7	6.7e-75
WP_108144708.1|69158_69758_+|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	35.6	2.5e-28
70892:70906	attR	AAAATCATTGATAGA	NA	NA	NA	NA
>prophage 1
NZ_CP042215	Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence	68993	0	6799	68993		Listeria_phage(20.0%)	11	NA	NA
WP_002382033.1|876_1656_-	hypothetical protein	NA	A8ATL9	Listeria_phage	46.2	7.4e-17
WP_002382034.1|1799_2351_-	hypothetical protein	NA	A0A1B0XUG6	Freshwater_phage	38.8	3.4e-08
WP_002360843.1|2374_2548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360847.1|2550_2736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002362397.1|3031_3232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360849.1|3334_3565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002382037.1|3619_4114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002368292.1|4179_4632_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	62.7	9.1e-44
WP_002368291.1|4645_4798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153246824.1|4809_5400_+	thermonuclease	NA	O64020	Bacillus_phage	55.9	9.8e-38
WP_002368289.1|5479_6799_+	DNA cytosine methyltransferase	NA	A0A1I9KFD6	Aeromonas_phage	44.4	1.5e-115
>prophage 2
NZ_CP042215	Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence	68993	13352	19407	68993	transposase	Organic_Lake_phycodnavirus(33.33%)	4	NA	NA
WP_002370927.1|13352_15497_+	peptidase domain-containing ABC transporter	NA	F2Y302	Organic_Lake_phycodnavirus	33.2	1.7e-18
WP_002368283.1|15493_16732_+	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	27.7	4.2e-22
WP_002368282.1|16732_17716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113846326.1|18277_19407_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	55.3	3.1e-80
>prophage 3
NZ_CP042215	Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence	68993	22658	28844	68993		Escherichia_phage(33.33%)	9	NA	NA
WP_002370256.1|22658_23255_+	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	36.6	7.1e-20
WP_153246826.1|23271_23556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002399062.1|23552_23762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153246827.1|23783_24008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002370254.1|24343_25672_+	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	42.4	3.7e-93
WP_002360672.1|25668_26019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153246828.1|26329_26986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153246829.1|27444_27834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002393760.1|27833_28844_-	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	28.4	1.6e-19
>prophage 4
NZ_CP042215	Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence	68993	60241	61855	68993		Streptococcus_phage(100.0%)	3	NA	NA
WP_002360824.1|60241_61231_+	CHAP domain-containing protein	NA	A0A1S5SEZ8	Streptococcus_phage	43.0	5.1e-39
WP_010829130.1|61294_61528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360827.1|61528_61855_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	45.3	1.5e-16
