assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009497695.1_ASM949769v1	NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	1	2202509-2202721	1,1,1	PILER-CR,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	Type I-E	TATGTCTTCCCCACACGCGTGGGGGTGTTTCT,TGTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTCT	32,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	2,3,3	3	TypeI-E	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	NA,NA	NA|131aa|up_9|NZ_CP026011.1_2189009_2189402_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|411aa|up_8|NZ_CP026011.1_2189438_2190671_-	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|145aa|up_7|NZ_CP026011.1_2191236_2191671_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_6|NZ_CP026011.1_2191787_2192987_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|386aa|up_5|NZ_CP026011.1_2193282_2194440_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_4|NZ_CP026011.1_2194482_2196633_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_3|NZ_CP026011.1_2196880_2197960_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|363aa|up_2|NZ_CP026011.1_2198262_2199351_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|NZ_CP026011.1_2199424_2201194_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|NZ_CP026011.1_2201186_2202257_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	cas3|872aa|down_0|NZ_CP026011.1_2203132_2205748_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|down_1|NZ_CP026011.1_2205751_2207275_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|down_2|NZ_CP026011.1_2207286_2207853_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|down_3|NZ_CP026011.1_2207845_2208493_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|down_4|NZ_CP026011.1_2208522_2209557_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|down_5|NZ_CP026011.1_2209590_2210286_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|down_6|NZ_CP026011.1_2210285_2211161_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|down_7|NZ_CP026011.1_2211138_2211426_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_8|NZ_CP026011.1_2213081_2214197_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_9|NZ_CP026011.1_2214207_2214891_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)
GCF_009497695.1_ASM949769v1	NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	2	2211474-2212843	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	Type I-E	GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	22,22,22	22	TypeI-E	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	NA,NA	NA|590aa|up_9|NZ_CP026011.1_2199424_2201194_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_8|NZ_CP026011.1_2201186_2202257_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	cas3|872aa|up_7|NZ_CP026011.1_2203132_2205748_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|NZ_CP026011.1_2205751_2207275_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|up_5|NZ_CP026011.1_2207286_2207853_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|NZ_CP026011.1_2207845_2208493_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|up_3|NZ_CP026011.1_2208522_2209557_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|up_2|NZ_CP026011.1_2209590_2210286_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|NZ_CP026011.1_2210285_2211161_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|NZ_CP026011.1_2211138_2211426_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_0|NZ_CP026011.1_2213081_2214197_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_1|NZ_CP026011.1_2214207_2214891_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|124aa|down_2|NZ_CP026011.1_2214951_2215323_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|251aa|down_3|NZ_CP026011.1_2215827_2216580_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_4|NZ_CP026011.1_2216582_2218367_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|446aa|down_5|NZ_CP026011.1_2218380_2219718_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_6|NZ_CP026011.1_2219801_2220425_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_7|NZ_CP026011.1_2220421_2221081_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_8|NZ_CP026011.1_2221130_2221868_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_9|NZ_CP026011.1_2221864_2222095_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]
GCF_009497695.1_ASM949769v1	NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	3	4149184-4149323	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACTGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,RT	NA,NA	NA|428aa|up_9|NZ_CP026011.1_4138932_4140216_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|NZ_CP026011.1_4140351_4141752_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|NZ_CP026011.1_4141797_4142490_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|NZ_CP026011.1_4142575_4142974_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|NZ_CP026011.1_4143031_4144276_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|NZ_CP026011.1_4144381_4144840_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|NZ_CP026011.1_4145097_4146555_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|NZ_CP026011.1_4146597_4147050_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|NZ_CP026011.1_4147052_4148108_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|NZ_CP026011.1_4148267_4149128_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|NZ_CP026011.1_4149350_4149566_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|NZ_CP026011.1_4149568_4150792_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|NZ_CP026011.1_4150804_4151401_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|NZ_CP026011.1_4151407_4152046_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|NZ_CP026011.1_4152038_4152833_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|NZ_CP026011.1_4152825_4154064_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|NZ_CP026011.1_4154067_4155411_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|247aa|down_7|NZ_CP026011.1_4155822_4156563_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_8|NZ_CP026011.1_4156533_4157301_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|194aa|down_9|NZ_CP026011.1_4157375_4157957_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase
