The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	5248519	1637306	1644211	5248519	tRNA	Planktothrix_phage(33.33%)	6	NA	NA
WP_004180551.1|1637306_1638170_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_004180550.1|1638180_1638954_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_002912636.1|1639194_1640088_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004144192.1|1640333_1641695_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004175198.1|1642013_1642736_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_004149058.1|1642732_1644211_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 2
NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	5248519	2682407	2693294	5248519		Escherichia_phage(87.5%)	9	NA	NA
WP_014907638.1|2682407_2685515_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
WP_014907639.1|2685569_2686835_+	MFS transporter	NA	NA	NA	NA	NA
WP_014907640.1|2686865_2687954_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	1.0e-210
WP_014907641.1|2688040_2688301_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	2.1e-40
WP_004176269.1|2688598_2689459_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002210513.1|2689479_2690241_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002903955.1|2690501_2691404_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_004224682.1|2691415_2692681_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.8	7.8e-234
WP_002210516.1|2692673_2693294_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 3
NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	5248519	3097710	3125828	5248519	holin,transposase,integrase	Salmonella_phage(23.08%)	34	3095179:3095193	3131822:3131836
3095179:3095193	attL	AACGCCCAGCGGCAG	NA	NA	NA	NA
WP_004148038.1|3097710_3098625_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_004213850.1|3099199_3100123_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
WP_015874671.1|3100595_3101135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015874670.1|3101176_3101407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041937777.1|3101538_3101814_-	hypothetical protein	NA	G8C7W1	Escherichia_phage	78.8	2.7e-06
WP_015874668.1|3101816_3102443_-	glycoside hydrolase family 19 protein	NA	F1C591	Cronobacter_phage	76.3	1.2e-89
WP_015874667.1|3102442_3102721_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	76.1	1.8e-34
WP_015874666.1|3102710_3103100_-	membrane protein	NA	K7PHB9	Enterobacterial_phage	79.1	2.0e-47
WP_077250515.1|3103606_3104374_-	hypothetical protein	NA	J7KHM1	Erwinia_phage	74.7	1.3e-106
WP_008806053.1|3104734_3105532_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	48.6	2.1e-67
WP_015874663.1|3105735_3106566_-	antitermination protein	NA	K7P7B9	Enterobacteria_phage	47.2	4.9e-59
WP_077250505.1|3106584_3107571_-	DUF968 domain-containing protein	NA	Q8SBE5	Shigella_phage	49.2	4.0e-92
WP_050767832.1|3107652_3108474_-	KilA-N domain-containing protein	NA	A0A0P0ZCS0	Stx2-converting_phage	65.4	4.5e-89
WP_015874660.1|3108563_3108962_-	RusA family crossover junction endodeoxyribonuclease	NA	K7PKN5	Enterobacterial_phage	70.6	4.7e-44
WP_015874659.1|3108958_3109435_-	hypothetical protein	NA	U5P451	Shigella_phage	60.3	6.1e-14
WP_015874658.1|3109431_3111402_-	DNA methyltransferase	NA	H9C171	Pectobacterium_phage	54.0	3.7e-198
WP_015874657.1|3111394_3112777_-	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	47.9	4.9e-104
WP_015874656.1|3112764_3113223_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_015874655.1|3113219_3114131_-	GntR family transcriptional regulator	NA	A0A1C9IHW0	Salmonella_phage	73.0	3.7e-52
WP_023322342.1|3114120_3114300_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	67.3	5.6e-13
WP_041937776.1|3114472_3115021_-	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	68.5	2.1e-66
WP_100169154.1|3115100_3115571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074423532.1|3115807_3116011_-	hypothetical protein	NA	K7PHB1	Enterobacterial_phage	69.2	3.5e-19
WP_041937775.1|3116110_3116767_+	helix-turn-helix domain-containing protein	NA	K7PLZ5	Enterobacterial_phage	83.9	7.9e-105
WP_015874651.1|3117173_3117659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041937773.1|3118600_3118972_+	hypothetical protein	NA	Q8HAA1	Salmonella_phage	88.6	7.7e-57
WP_015874649.1|3119018_3119846_+	YfdQ family protein	NA	Q8HAA2	Salmonella_phage	71.6	2.5e-111
WP_041937772.1|3120322_3120850_+	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	69.1	1.0e-62
WP_041937771.1|3120849_3121050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015874647.1|3121042_3121828_+	hypothetical protein	NA	C7BGF1	Burkholderia_phage	53.3	4.8e-64
WP_015874646.1|3121955_3122264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008806034.1|3123096_3123333_+	excisionase	NA	NA	NA	NA	NA
WP_015874644.1|3123322_3124465_+|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z02	Phage_21	81.6	2.6e-172
WP_004150800.1|3124577_3125828_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
3131822:3131836	attR	CTGCCGCTGGGCGTT	NA	NA	NA	NA
>prophage 4
NZ_CP026011	Klebsiella pneumoniae strain K2044 chromosome, complete genome	5248519	3386491	3395955	5248519	protease,tRNA	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_012737718.1|3386491_3388213_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_002898014.1|3388257_3388959_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3389312_3389531_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002896522.1|3389651_3391931_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_002896520.1|3391961_3392279_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3392604_3392826_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_004150848.1|3392902_3394843_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896440.1|3394839_3395955_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 1
NZ_CP026012	Klebsiella pneumoniae strain K2044 plasmid pK2044, complete sequence	224152	30910	96022	224152	transposase,protease,integrase	Caulobacter_phage(13.64%)	58	36619:36634	90260:90275
WP_004225018.1|30910_31906_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.7	3.1e-20
WP_004210218.1|32111_33125_-	NAD(P)-dependent alcohol dehydrogenase	NA	M1PHA2	Moumouvirus	26.0	5.8e-06
WP_004210220.1|33237_33765_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_077250518.1|33778_36736_+|transposase	Tn3 family transposase	transposase	A0A125RQ78	Bacillus_phage	22.8	2.3e-50
36619:36634	attL	GCAGCAGAGAATGACA	NA	NA	NA	NA
WP_004144375.1|37577_38438_+	alpha/beta hydrolase	NA	A2RQC8	Archaeal_BJ1_virus	21.7	9.0e-08
WP_011251321.1|40169_40805_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_011251320.1|41141_42383_-	tellurium resistance protein TerF	NA	A0A2D1GNA9	Pseudoalteromonas_phage	27.2	2.2e-10
WP_000301240.1|42467_43043_-	tellurium resistance cAMP binding protein TerE	NA	K4JRX3	Caulobacter_phage	41.6	9.6e-30
WP_004026609.1|43129_43708_-	tellurium resistance membrane protein TerD	NA	K4JRX3	Caulobacter_phage	40.8	1.9e-33
WP_004026607.1|43746_44787_-	tellurium resistance membrane protein TerC	NA	K7QKE8	Escherichia_phage	46.5	1.8e-71
WP_004026604.1|44810_45266_-	tellurium resistance membrane protein TerB	NA	NA	NA	NA	NA
WP_011251319.1|45288_46440_-	tellurium resistance system protein TerA	NA	NA	NA	NA	NA
WP_004196925.1|46436_47021_-	tellurium resistance protein TerZ	NA	K4JRX3	Caulobacter_phage	29.4	2.0e-11
WP_011251317.1|47331_48390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004181731.1|48401_49544_+	hypothetical protein	NA	A0A172Q0Y1	Acinetobacter_phage	28.5	3.7e-33
WP_004181732.1|49536_50310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004026596.1|50311_51391_+|protease	cysteine protease StiP family protein	protease	A0A172Q0S8	Acinetobacter_phage	34.1	1.7e-40
WP_011251315.1|51390_52347_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA	NA
WP_011251314.1|52357_53581_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_004196888.1|53583_54042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011251313.1|54521_55160_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_004026586.1|55184_55826_+	TerD family protein	NA	A0A2P1N0C0	Streptomyces_phage	25.1	2.4e-05
WP_004210266.1|55826_56465_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_011251312.1|56557_57598_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_011251311.1|57597_59331_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA	NA
WP_004196935.1|59358_60858_+	kinase	NA	NA	NA	NA	NA
WP_032720951.1|61236_61719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004118061.1|61994_62399_-	DUF2251 domain-containing protein	NA	NA	NA	NA	NA
WP_004118062.1|62946_63225_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_004181742.1|63318_63531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011251307.1|64561_66061_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.1	1.8e-35
WP_004210292.1|66041_67307_-	MSMEG_0569 family flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011154627.1|67324_67615_-	MSMEG_0570 family nitrogen starvation response protein	NA	NA	NA	NA	NA
WP_004210297.1|67626_68589_-	sll0787 family AIR synthase-like protein	NA	NA	NA	NA	NA
WP_004210298.1|68585_69149_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_004210300.1|69159_70269_-	MSMEG_0568 family radical SAM protein	NA	NA	NA	NA	NA
WP_004902273.1|70228_71230_-	Nit6803 family nitriliase	NA	NA	NA	NA	NA
WP_004210304.1|71243_71726_-	MSMEG_0572 family nitrogen starvation response protein	NA	NA	NA	NA	NA
WP_004210305.1|72092_73493_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_004186895.1|74101_74416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004026565.1|74658_75111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004210308.1|76356_77241_+	RepB family plasmid replication initiator protein	NA	J9Q7H0	Salmonella_phage	42.8	4.4e-50
WP_029884537.1|78389_79466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213836.1|80608_80863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213833.1|81040_82177_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_004213829.1|82242_82560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197568.1|82711_83035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011251302.1|83786_84746_-	DNA replication protein	NA	NA	NA	NA	NA
WP_004186937.1|84788_85196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213821.1|85205_85649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213807.1|86912_87881_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.8	7.3e-14
WP_004902302.1|88149_89742_-|transposase	IS66-like element ISKox1 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	61.8	3.2e-176
WP_004189161.1|89772_90123_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	63.8	5.2e-39
WP_004215130.1|90119_90560_-	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	53.8	4.4e-19
90260:90275	attR	TGTCATTCTCTGCTGC	NA	NA	NA	NA
WP_004902307.1|90756_90939_+	DUF4113 domain-containing protein	NA	A0A1W6JNT0	Morganella_phage	57.1	9.1e-11
WP_004117790.1|92144_93116_-	ParB/RepB/Spo0J family plasmid partition protein	NA	I3WF22	Macacine_betaherpesvirus	86.9	7.0e-150
WP_004211841.1|93115_94282_-	plasmid-partitioning protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	97.4	2.0e-223
WP_004211839.1|95011_96022_+	replication initiation protein	NA	J9Q7H0	Salmonella_phage	53.5	1.1e-86
