assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009363775.1_ASM936377v1	NZ_CP045418	Pseudoalteromonas sp. THAF3 chromosome, complete genome	1	90761-90881	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	Orphan	ACCTACAACACAGCACACCGTCACCGCATCTGTAGGCAAGGCTT	44	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	NA,NA|175aa|down_0|NZ_CP045418.1_91452_91977_-,NA|121aa|down_2|NZ_CP045418.1_93466_93829_-,NA|66aa|down_4|NZ_CP045418.1_94667_94865_+,NA|155aa|down_8|NZ_CP045418.1_97519_97984_+	NA|284aa|up_9|NZ_CP045418.1_71153_72005_-	sd00010, SLR, Sel1-like repeat	NA|465aa|up_8|NZ_CP045418.1_72068_73463_-	cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase	NA|690aa|up_7|NZ_CP045418.1_73577_75647_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|200aa|up_6|NZ_CP045418.1_75698_76298_-	pfam12339, DNAJ_related, DNA-J related protein	NA|929aa|up_5|NZ_CP045418.1_76370_79157_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|421aa|up_4|NZ_CP045418.1_79148_80411_-	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|420aa|up_3|NZ_CP045418.1_80528_81788_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|109aa|up_2|NZ_CP045418.1_81961_82288_-	PRK09381, trxA, thioredoxin TrxA	NA|424aa|up_1|NZ_CP045418.1_82379_83651_+	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|476aa|up_0|NZ_CP045418.1_83772_85200_+	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|175aa|down_0|NZ_CP045418.1_91452_91977_-	NA	NA|462aa|down_1|NZ_CP045418.1_92070_93456_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|121aa|down_2|NZ_CP045418.1_93466_93829_-	NA	NA|158aa|down_3|NZ_CP045418.1_93904_94378_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|66aa|down_4|NZ_CP045418.1_94667_94865_+	NA	NA|199aa|down_5|NZ_CP045418.1_94861_95458_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|182aa|down_6|NZ_CP045418.1_95490_96036_-	pfam07152, YaeQ, YaeQ protein	NA|315aa|down_7|NZ_CP045418.1_96142_97087_+	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|155aa|down_8|NZ_CP045418.1_97519_97984_+	NA	NA|260aa|down_9|NZ_CP045418.1_98020_98800_+	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains
GCF_009363775.1_ASM936377v1	NZ_CP045418	Pseudoalteromonas sp. THAF3 chromosome, complete genome	2	456683-456812	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	Orphan	TTTCCATTGTCAGGCTAAGCCCGACCTACAACGGGTGTG	39	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	NA,NA	NA|649aa|up_9|NZ_CP045418.1_442407_444354_+	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|571aa|up_8|NZ_CP045418.1_444343_446056_+	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|234aa|up_7|NZ_CP045418.1_446065_446767_+	pfam07277, SapC, SapC	NA|373aa|up_6|NZ_CP045418.1_446833_447952_+	PRK15057, PRK15057, UDP-glucose 6-dehydrogenase; Provisional	NA|292aa|up_5|NZ_CP045418.1_448036_448912_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|339aa|up_4|NZ_CP045418.1_448927_449944_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|453aa|up_3|NZ_CP045418.1_450710_452069_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|544aa|up_2|NZ_CP045418.1_452165_453797_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|234aa|up_1|NZ_CP045418.1_453924_454626_-	PRK10839, PRK10839, 16S rRNA pseudouridine(516) synthase RsuA	NA|373aa|up_0|NZ_CP045418.1_454695_455814_+	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|196aa|down_0|NZ_CP045418.1_456936_457524_-	PRK09480, slmA, division inhibitor protein; Provisional	NA|396aa|down_1|NZ_CP045418.1_457618_458806_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|225aa|down_2|NZ_CP045418.1_458911_459586_+	PRK00024, PRK00024, DNA repair protein RadC	NA|79aa|down_3|NZ_CP045418.1_459809_460046_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|52aa|down_4|NZ_CP045418.1_460058_460214_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|618aa|down_5|NZ_CP045418.1_460255_462109_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|499aa|down_6|NZ_CP045418.1_462680_464177_+	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|369aa|down_7|NZ_CP045418.1_464200_465307_+	PRK13402, PRK13402, glutamate 5-kinase	NA|416aa|down_8|NZ_CP045418.1_465303_466551_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|407aa|down_9|NZ_CP045418.1_466608_467829_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]
GCF_009363775.1_ASM936377v1	NZ_CP045418	Pseudoalteromonas sp. THAF3 chromosome, complete genome	3	1133438-1137126	1,3,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh	csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	Type I-F	CTTCACTGCCGAACAGGCAGCTTAGAAA,CTTCACTGCCGAACAGGCAGCTTAGAAA,CTTCACTGCCGAACAGGCAGCTTAGAAA,CTTCACTGCCGAACAGGCAGCTTAGAAA	28,28,28,28	1	1	1135027-1135058	NZ_CP045418.1_1624920-1624889	I-F:I-F:I-F:I-F	60,61,61,60	61	TypeI-F	csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	NA|142aa|up_8|NZ_CP045418.1_1121477_1121903_-,NA|117aa|down_3|NZ_CP045418.1_1141389_1141740_-	NA|178aa|up_9|NZ_CP045418.1_1120783_1121317_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|142aa|up_8|NZ_CP045418.1_1121477_1121903_-	NA	NA|312aa|up_7|NZ_CP045418.1_1122152_1123088_+	cd12914, PDC1_DGC_like, first PDC (PhoQ/DcuS/CitA) domain of diguanylate-cyclase and similar domains	NA|394aa|up_6|NZ_CP045418.1_1123144_1124326_+	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	cas1|338aa|up_5|NZ_CP045418.1_1124654_1125668_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1137aa|up_4|NZ_CP045418.1_1125664_1129075_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|503aa|up_3|NZ_CP045418.1_1129064_1130573_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|345aa|up_2|NZ_CP045418.1_1130569_1131604_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|342aa|up_1|NZ_CP045418.1_1131613_1132639_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|213aa|up_0|NZ_CP045418.1_1132649_1133288_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|542aa|down_0|NZ_CP045418.1_1138006_1139632_+	pfam03961, FapA, Flagellar Assembly Protein A	DEDDh|227aa|down_1|NZ_CP045418.1_1139645_1140326_-	PRK05168, PRK05168, ribonuclease T; Provisional	NA|289aa|down_2|NZ_CP045418.1_1140506_1141373_+	pfam18393, MotY_N, MotY N-terminal domain	NA|117aa|down_3|NZ_CP045418.1_1141389_1141740_-	NA	NA|659aa|down_4|NZ_CP045418.1_1141803_1143780_-	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|405aa|down_5|NZ_CP045418.1_1143966_1145181_+	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I	NA|372aa|down_6|NZ_CP045418.1_1145285_1146401_+	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|339aa|down_7|NZ_CP045418.1_1146417_1147434_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|1540aa|down_8|NZ_CP045418.1_1147677_1152297_+	TIGR03505, FimV_core, FimV N-terminal domain	NA|268aa|down_9|NZ_CP045418.1_1152475_1153279_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA
GCF_009363775.1_ASM936377v1	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	1	659597-659676	1	CRISPRCasFinder	no		csa3,DinG	Orphan	ATCAAGGGGTCAGAGTTGTTGAAA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,PD-DExK,RT,DinG	NA|223aa|up_0|NZ_CP045419.1_658790_659459_+,NA|169aa|down_1|NZ_CP045419.1_661802_662309_+,NA|222aa|down_2|NZ_CP045419.1_662459_663125_+	NA|1338aa|up_9|NZ_CP045419.1_638021_642035_+	pfam02128, Peptidase_M36, Fungalysin metallopeptidase (M36)	NA|447aa|up_8|NZ_CP045419.1_642358_643699_+	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|335aa|up_7|NZ_CP045419.1_643884_644889_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|268aa|up_6|NZ_CP045419.1_644877_645681_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|408aa|up_5|NZ_CP045419.1_645832_647056_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|210aa|up_4|NZ_CP045419.1_647070_647700_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|404aa|up_3|NZ_CP045419.1_648001_649213_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|234aa|up_2|NZ_CP045419.1_649237_649939_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|2844aa|up_1|NZ_CP045419.1_650259_658791_+	pfam03534, SpvB, Salmonella virulence plasmid 65kDa B protein	NA|223aa|up_0|NZ_CP045419.1_658790_659459_+	NA	NA|157aa|down_0|NZ_CP045419.1_660974_661445_+	pfam15428, Imm26, Immunity protein 26	NA|169aa|down_1|NZ_CP045419.1_661802_662309_+	NA	NA|222aa|down_2|NZ_CP045419.1_662459_663125_+	NA	NA|190aa|down_3|NZ_CP045419.1_664517_665087_-	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]	NA|120aa|down_4|NZ_CP045419.1_665150_665510_-	cd04769, HTH_MerR2, Helix-Turn-Helix DNA binding domain of MerR2-like transcription regulators	NA|419aa|down_5|NZ_CP045419.1_665721_666978_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|240aa|down_6|NZ_CP045419.1_667092_667812_-	pfam06468, Spond_N, Spondin_N	NA|235aa|down_7|NZ_CP045419.1_667821_668526_-	pfam06468, Spond_N, Spondin_N	NA|226aa|down_8|NZ_CP045419.1_668786_669464_-	pfam04391, DUF533, Protein of unknown function (DUF533)	NA|130aa|down_9|NZ_CP045419.1_669729_670119_+	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR
