The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045221	Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38 chromosome, complete genome	6615046	582690	689568	6615046	tail,protease,plate,tRNA,holin	Pseudomonas_phage(40.35%)	109	NA	NA
WP_031286532.1|582690_583506_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	33.0	6.6e-08
WP_023969782.1|583565_583970_-	SufE family protein	NA	NA	NA	NA	NA
WP_023969783.1|583966_585172_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	37.1	2.8e-71
WP_023969784.1|585248_586283_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_009047207.1|586317_586680_-	ArsC family reductase	NA	NA	NA	NA	NA
WP_023969785.1|586906_588553_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_023969786.1|588667_589867_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_023969787.1|589906_592609_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_023969788.1|592656_593439_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_007924078.1|593846_594587_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_009042383.1|594791_595658_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_007924076.1|595865_596609_+	UMP kinase	NA	NA	NA	NA	NA
WP_023969789.1|596605_597163_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_023969790.1|597177_597933_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	38.8	1.3e-18
WP_023969791.1|597932_598739_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_023969792.1|598735_599926_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_023969793.1|599978_601331_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_023969794.1|601405_603793_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_007924063.1|603838_604342_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_023969795.1|604345_605401_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_007924058.1|605510_605951_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_007924057.1|605947_606724_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_023969796.1|606726_607857_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_080684653.1|607868_608501_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	7.5e-28
WP_023969798.1|608570_612095_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	38.0	3.6e-196
WP_023969799.1|612235_613183_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_023969800.1|613302_614631_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_007924045.1|614905_616537_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
WP_009047224.1|616542_617388_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.2e-49
WP_009042397.1|617546_618836_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
WP_023969801.1|619008_619287_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_023969802.1|619283_619991_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_023969803.1|620041_620938_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007924035.1|621044_622157_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	8.3e-30
WP_023969804.1|622246_623092_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_007924033.1|623144_623618_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_023969805.1|623614_624673_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_023969806.1|624660_625410_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	2.3e-68
WP_023969807.1|625409_626087_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	1.2e-42
WP_007924027.1|626296_627130_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.3e-06
WP_007924026.1|627236_628241_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
WP_023969808.1|628741_629065_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_023969809.1|629207_631787_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	2.4e-27
WP_016701981.1|631983_632709_+	helix-turn-helix transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.4	1.3e-124
WP_009047293.1|633228_633576_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	87.7	1.0e-50
WP_023969810.1|633742_634507_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	1.2e-06
WP_023969811.1|634727_635252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969812.1|635255_635864_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	60.4	3.7e-48
WP_007924012.1|635877_636210_+|plate	phage baseplate protein	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	2.1e-37
WP_023969813.1|636206_637202_+|plate	baseplate J protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	63.5	2.3e-108
WP_023969814.1|637198_637834_+|tail	phage tail protein I	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	55.2	3.4e-44
WP_023969815.1|637834_639781_+|tail	tail protein	tail	A4PE45	Ralstonia_virus	48.9	1.5e-58
WP_023969816.1|639783_640227_+	hypothetical protein	NA	Q9ZXK5	Pseudomonas_virus	54.2	5.8e-35
WP_023969817.1|640326_640548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969818.1|640550_641717_+|tail	tail protein	tail	B0ZSG8	Halomonas_phage	57.5	2.9e-126
WP_023969819.1|641716_642223_+|tail	phage tail protein	tail	Q6R4W3	Vibrio_virus	36.9	2.1e-25
WP_023969820.1|642350_642932_+|tail	phage tail assembly protein	tail	B0ZSH0	Halomonas_phage	39.4	9.1e-28
WP_023969821.1|643060_645310_+|tail	phage tail tape measure protein	tail	A0A2H4JAA5	uncultured_Caudovirales_phage	41.7	6.2e-08
WP_007923988.1|645309_645693_+|tail	phage tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	53.5	4.7e-33
WP_023969822.1|645685_645898_+|tail	tail protein	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	68.6	3.9e-21
WP_009047308.1|645907_646927_+	hypothetical protein	NA	A0A2H4JH05	uncultured_Caudovirales_phage	56.5	4.7e-104
WP_023969823.1|647107_647692_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	71.5	6.9e-76
WP_007923975.1|647688_647871_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
WP_023969824.1|647870_649367_+|tail	tail sheath protein	tail	B5TK67	Pseudomonas_phage	90.8	3.5e-257
WP_007923973.1|649433_649781_+|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
WP_007923972.1|649777_650074_+|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
WP_031286537.1|650204_652157_+	hypothetical protein	NA	B5TK70	Pseudomonas_phage	51.2	1.2e-42
WP_023969826.1|652143_653382_+	2-hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	75.7	4.4e-181
WP_023969827.1|653385_654426_+	hypothetical protein	NA	B5TK72	Pseudomonas_phage	82.7	1.1e-161
WP_023969828.1|654537_655047_+|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	87.6	3.7e-78
WP_009047315.1|655046_655445_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	89.4	1.7e-65
WP_023969829.1|655434_656475_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	87.0	2.3e-167
WP_009042430.1|656462_657062_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	91.5	8.5e-106
WP_036984802.1|657073_657928_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	75.0	4.4e-23
WP_023969831.1|657932_658574_+	hypothetical protein	NA	B5TK78	Pseudomonas_phage	61.6	1.6e-38
WP_023969832.1|658670_659591_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	42.3	1.3e-23
WP_023969833.1|659590_660079_+	hypothetical protein	NA	A0A291LAV4	Bordetella_phage	45.5	3.5e-09
WP_080684654.1|660246_661167_+|tail	phage tail protein	tail	B5TK81	Pseudomonas_phage	39.6	1.5e-37
WP_023969834.1|661169_661655_+|tail	phage tail protein	tail	Q9ZXK5	Pseudomonas_virus	43.3	4.2e-18
WP_031286542.1|661726_662467_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	67.1	4.2e-22
WP_023969835.1|662469_662901_+	hypothetical protein	NA	Q9ZXK5	Pseudomonas_virus	38.4	2.2e-23
WP_023969836.1|662946_663510_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	83.3	3.7e-87
WP_023969837.1|663491_664028_+	lysozyme	NA	B5TK84	Pseudomonas_phage	70.8	2.2e-60
WP_023969838.1|664110_664611_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	86.1	1.0e-72
WP_007923942.1|664694_665747_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	60.9	4.4e-113
WP_023969839.1|665755_666223_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_009047327.1|666268_667384_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
WP_009047328.1|667868_668063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007923938.1|668064_668487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023969840.1|668676_669387_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_023969841.1|669721_670372_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_009047331.1|670447_670810_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_007923931.1|670806_671733_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009047333.1|671866_672646_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_023969842.1|672718_673414_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_023969843.1|673500_674271_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023969844.1|674404_674866_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	51.3	1.1e-36
WP_009047337.1|674932_675643_-	RNA-binding protein S4	NA	NA	NA	NA	NA
WP_023969845.1|675725_676199_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023969846.1|676305_677643_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_023969847.1|677641_677830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969848.1|677974_679876_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.9	1.3e-78
WP_023969849.1|680093_680369_-	DUF3077 domain-containing protein	NA	NA	NA	NA	NA
WP_124355593.1|680365_680560_-	hypothetical protein	NA	A0A1B0VP73	Pseudomonas_phage	58.7	3.8e-07
WP_023969850.1|680869_682165_-	virulence factor family protein	NA	NA	NA	NA	NA
WP_023969851.1|682164_684813_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
WP_023969852.1|685751_686816_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_023969853.1|686881_687835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023969854.1|687852_689568_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP045221	Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38 chromosome, complete genome	6615046	3498542	3504813	6615046	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
WP_023964443.1|3498542_3498935_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	83.8	9.6e-58
WP_009049762.1|3498938_3499301_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	75.0	1.9e-44
WP_023964441.1|3499300_3499600_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	70.7	6.3e-33
WP_023964439.1|3499596_3499932_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	8.5e-47
WP_023964437.1|3499928_3500930_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.5	1.6e-165
WP_023964435.1|3501019_3502027_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_009049767.1|3502137_3503532_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_023964432.1|3503532_3504813_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.8	3.6e-101
>prophage 3
NZ_CP045221	Pseudomonas chlororaphis subsp. aurantiaca strain ARS 38 chromosome, complete genome	6615046	5394103	5443444	6615046	holin,protease,transposase	Burkholderia_phage(33.33%)	48	NA	NA
WP_007926027.1|5394103_5394604_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_023969179.1|5394817_5395705_+	acyltransferase	NA	NA	NA	NA	NA
WP_023969180.1|5395705_5396278_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_124355730.1|5396933_5397188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080684638.1|5397197_5398151_+	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_023969181.1|5398147_5398714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007931017.1|5398776_5399976_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	29.3	6.5e-12
WP_009051219.1|5400196_5401054_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_023969182.1|5401214_5401847_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_023969183.1|5401993_5405011_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_023969184.1|5405007_5405337_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_023969185.1|5405351_5406602_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_023969186.1|5406625_5407879_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.1e-99
WP_023969187.1|5408326_5409070_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
WP_023969188.1|5409297_5410338_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_023969189.1|5410505_5411951_+	cytosine permease	NA	NA	NA	NA	NA
WP_023969190.1|5411947_5412772_+	carbon-nitrogen hydrolase	NA	M1HUK8	Acanthocystis_turfacea_Chlorella_virus	35.9	2.0e-20
WP_023969191.1|5412909_5413734_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023969192.1|5413939_5415040_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_080684639.1|5415070_5415310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969193.1|5415321_5416614_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_023969194.1|5416688_5416967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023969195.1|5416991_5417612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124355698.1|5418866_5419637_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_023969197.1|5419652_5420873_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_023969198.1|5420872_5422822_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_023969199.1|5422962_5425023_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_003228980.1|5425038_5425569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007926352.1|5425731_5426709_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_080577968.1|5426734_5426920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969200.1|5426936_5427338_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_023969201.1|5427543_5427798_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	63.1	2.9e-23
WP_050899134.1|5427736_5428105_+	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	70.1	5.0e-32
WP_023969202.1|5428138_5428555_+	DUF3010 family protein	NA	NA	NA	NA	NA
WP_016704212.1|5428670_5429618_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_023969204.1|5429811_5430756_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_023969205.1|5430829_5431717_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_023969206.1|5431851_5432817_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_023969207.1|5432963_5433452_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_023969208.1|5433465_5434629_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_124355699.1|5434873_5435818_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_007925996.1|5436181_5436442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023969209.1|5436504_5436951_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_007925992.1|5436951_5438046_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_009051249.1|5438593_5439970_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_023969210.1|5440396_5441353_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_023969211.1|5441423_5442269_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_023969212.1|5442265_5443444_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.6	4.5e-26
