assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009301415.1_ASM930141v1	NZ_CP045073	Paracoccus kondratievae strain BJQ0001 chromosome 2, complete sequence	1	276099-276431	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	Type I-E	GGGTCTATCCCCGCAGGTGCGGGGGAGCC,GGGTCTATCCCCGCAGGTGCGGGGGAGCC,GGGTCTATCCCCGCAGGTGCGGGGGAGCC	29,29,29	0	0	NA	NA	NA:NA:NA	5,5,4	5	TypeI-E	DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|65aa|up_2|NZ_CP045073.1_274755_274950_-,NA|81aa|up_1|NZ_CP045073.1_274951_275194_-,NA	NA|369aa|up_9|NZ_CP045073.1_266682_267789_+	pfam01052, FliMN_C, Type III flagellar switch regulator (C-ring) FliN C-term	NA|73aa|up_8|NZ_CP045073.1_267970_268189_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|220aa|up_7|NZ_CP045073.1_268214_268874_+	pfam02545, Maf, Maf-like protein	NA|354aa|up_6|NZ_CP045073.1_268870_269932_+	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|50aa|up_5|NZ_CP045073.1_269928_270078_+	PRK01343, PRK01343, zinc-binding protein; Provisional	NA|244aa|up_4|NZ_CP045073.1_270521_271253_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|358aa|up_3|NZ_CP045073.1_273678_274752_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|65aa|up_2|NZ_CP045073.1_274755_274950_-	NA	NA|81aa|up_1|NZ_CP045073.1_274951_275194_-	NA	NA|243aa|up_0|NZ_CP045073.1_275192_275921_+	pfam12844, HTH_19, Helix-turn-helix domain	NA|116aa|down_0|NZ_CP045073.1_278038_278386_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|132aa|down_1|NZ_CP045073.1_278382_278778_-	pfam01527, HTH_Tnp_1, Transposase	cas2|98aa|down_2|NZ_CP045073.1_280783_281077_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|293aa|down_3|NZ_CP045073.1_281076_281955_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|249aa|down_4|NZ_CP045073.1_281954_282701_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|221aa|down_5|NZ_CP045073.1_282697_283360_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|378aa|down_6|NZ_CP045073.1_283359_284493_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_7|NZ_CP045073.1_284485_285016_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|503aa|down_8|NZ_CP045073.1_285008_286517_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|850aa|down_9|NZ_CP045073.1_286799_289349_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3
GCF_009301415.1_ASM930141v1	NZ_CP045073	Paracoccus kondratievae strain BJQ0001 chromosome 2, complete sequence	2	278861-280719	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	Type I-E	GGGTCTATCCCCGCAGGTGCGGGGGAGCC,GGGTCTATCCCCGCAGGTGCGGGGGAGCC,GGGTCTATCCCCGCAGGTGCGGGGGAGCC,GGGTCTATCCCCGCAGGTGCGGGGGAGCC	29,29,29,29	1	1	280293-280324	NZ_CP045072.1_1546834-1546865	NA:NA:NA:NA	28,30,30,28	30	TypeI-E	DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|65aa|up_4|NZ_CP045073.1_274755_274950_-,NA|81aa|up_3|NZ_CP045073.1_274951_275194_-,NA	NA|220aa|up_9|NZ_CP045073.1_268214_268874_+	pfam02545, Maf, Maf-like protein	NA|354aa|up_8|NZ_CP045073.1_268870_269932_+	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|50aa|up_7|NZ_CP045073.1_269928_270078_+	PRK01343, PRK01343, zinc-binding protein; Provisional	NA|244aa|up_6|NZ_CP045073.1_270521_271253_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|358aa|up_5|NZ_CP045073.1_273678_274752_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|65aa|up_4|NZ_CP045073.1_274755_274950_-	NA	NA|81aa|up_3|NZ_CP045073.1_274951_275194_-	NA	NA|243aa|up_2|NZ_CP045073.1_275192_275921_+	pfam12844, HTH_19, Helix-turn-helix domain	NA|116aa|up_1|NZ_CP045073.1_278038_278386_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|132aa|up_0|NZ_CP045073.1_278382_278778_-	pfam01527, HTH_Tnp_1, Transposase	cas2|98aa|down_0|NZ_CP045073.1_280783_281077_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|293aa|down_1|NZ_CP045073.1_281076_281955_-	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas6e|249aa|down_2|NZ_CP045073.1_281954_282701_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|221aa|down_3|NZ_CP045073.1_282697_283360_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|378aa|down_4|NZ_CP045073.1_283359_284493_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_5|NZ_CP045073.1_284485_285016_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|503aa|down_6|NZ_CP045073.1_285008_286517_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|850aa|down_7|NZ_CP045073.1_286799_289349_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|82aa|down_8|NZ_CP045073.1_289798_290044_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|108aa|down_9|NZ_CP045073.1_290153_290477_+	pfam12773, DZR, Double zinc ribbon
GCF_009301415.1_ASM930141v1	NZ_CP045072	Paracoccus kondratievae strain BJQ0001 chromosome 1, complete sequence	1	2083734-2084228	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,csa3	Orphan	GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC,GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC,GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC	32,32,32	1	1	2084163-2084196	NZ_CP045072.1_1555911-1555944	I-C:I-C:I-C	6,7,7	7	Orphan	DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|465aa|up_1|NZ_CP045072.1_2078028_2079423_+,NA|113aa|down_2|NZ_CP045072.1_2088290_2088629_+,NA|128aa|down_4|NZ_CP045072.1_2089263_2089647_-,NA|90aa|down_8|NZ_CP045072.1_2093582_2093852_-	NA|266aa|up_9|NZ_CP045072.1_2069200_2069998_+	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	NA|267aa|up_8|NZ_CP045072.1_2070003_2070804_+	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|402aa|up_7|NZ_CP045072.1_2070803_2072009_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|297aa|up_6|NZ_CP045072.1_2072159_2073050_+	cd02541, UGPase_prokaryotic, Prokaryotic UGPase catalyses the synthesis of UDP-glucose	NA|333aa|up_5|NZ_CP045072.1_2073055_2074054_+	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]	NA|413aa|up_4|NZ_CP045072.1_2074043_2075282_+	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|342aa|up_3|NZ_CP045072.1_2075306_2076332_+	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2	NA|561aa|up_2|NZ_CP045072.1_2076343_2078026_+	pfam02485, Branch, Core-2/I-Branching enzyme	NA|465aa|up_1|NZ_CP045072.1_2078028_2079423_+	NA	NA|159aa|up_0|NZ_CP045072.1_2079437_2079914_-	pfam13586, DDE_Tnp_1_2, Transposase DDE domain	NA|253aa|down_0|NZ_CP045072.1_2086772_2087530_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|218aa|down_1|NZ_CP045072.1_2087526_2088180_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|113aa|down_2|NZ_CP045072.1_2088290_2088629_+	NA	NA|96aa|down_3|NZ_CP045072.1_2088631_2088919_+	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family	NA|128aa|down_4|NZ_CP045072.1_2089263_2089647_-	NA	NA|368aa|down_5|NZ_CP045072.1_2089643_2090747_-	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|252aa|down_6|NZ_CP045072.1_2090746_2091502_-	pfam01311, Bac_export_1, Bacterial export proteins, family 1	NA|696aa|down_7|NZ_CP045072.1_2091498_2093586_-	PRK06012, flhA, flagellar type III secretion system protein FlhA	NA|90aa|down_8|NZ_CP045072.1_2093582_2093852_-	NA	NA|289aa|down_9|NZ_CP045072.1_2093848_2094715_-	PRK09110, PRK09110, flagellar motor stator protein MotA
