assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	1	140866-140952	1	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CGGGACGTCCGCGCGCTCGGGGAGGG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA|84aa|down_6|NZ_CP045178.1_150213_150465_-	NA|395aa|up_9|NZ_CP045178.1_128875_130060_+	pfam05834, Lycopene_cycl, Lycopene cyclase protein	NA|243aa|up_8|NZ_CP045178.1_130118_130847_+	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|542aa|up_7|NZ_CP045178.1_130780_132406_+	COG3349, COG3349, Uncharacterized conserved protein [Function unknown]	NA|137aa|up_6|NZ_CP045178.1_132514_132925_-	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|340aa|up_5|NZ_CP045178.1_133073_134093_-	pfam00355, Rieske, Rieske [2Fe-2S] domain	NA|334aa|up_4|NZ_CP045178.1_134092_135094_-	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head	NA|514aa|up_3|NZ_CP045178.1_135090_136632_-	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|417aa|up_2|NZ_CP045178.1_136628_137879_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|698aa|up_1|NZ_CP045178.1_138074_140168_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|140aa|up_0|NZ_CP045178.1_140337_140757_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|363aa|down_0|NZ_CP045178.1_141154_142243_-	cd20000, PBP1_ABC_rhamnose, rhamnose ABC transporter substrate-binding protein	NA|332aa|down_1|NZ_CP045178.1_142364_143360_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|347aa|down_2|NZ_CP045178.1_143352_144393_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|499aa|down_3|NZ_CP045178.1_144389_145886_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|1067aa|down_4|NZ_CP045178.1_146084_149285_+	pfam17389, Bac_rhamnosid6H, Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain	NA|170aa|down_5|NZ_CP045178.1_149578_150088_+	PRK00431, PRK00431, ADP-ribose-binding protein	NA|84aa|down_6|NZ_CP045178.1_150213_150465_-	NA	NA|811aa|down_7|NZ_CP045178.1_150439_152872_+	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family	NA|409aa|down_8|NZ_CP045178.1_153134_154361_+	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|413aa|down_9|NZ_CP045178.1_154375_155614_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	2	1081042-1081292	1	PILER-CR	no	casR	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CCGACGCGCCCGAAGTCGGGACCTGGCCGTACCCAGCGCCCGGGTCGAGACCTGACTC	58	2	3	1081100-1081141|1081100-1081141|1081200-1081264	NZ_CP045178.1_1081544-1081585|NZ_CP045178.1_1081293-1081334|NZ_CP045178.1_1081391-1081455	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|274aa|up_4|NZ_CP045178.1_1075535_1076357_-,NA|510aa|up_3|NZ_CP045178.1_1076580_1078110_-,NA|473aa|down_2|NZ_CP045178.1_1083981_1085400_-,NA|65aa|down_4|NZ_CP045178.1_1086469_1086664_+	casR|299aa|up_9|NZ_CP045178.1_1063967_1064864_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|362aa|up_8|NZ_CP045178.1_1065101_1066187_+	TIGR03451, S-hydroxymethylmycothiol_dehydrogenase, S-(hydroxymethyl)mycothiol dehydrogenase	NA|842aa|up_7|NZ_CP045178.1_1066578_1069104_+	COG0404, GcvT, Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]	NA|379aa|up_6|NZ_CP045178.1_1069431_1070568_+	cd08884, RHO_alpha_C_GbcA-like, C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases	NA|1558aa|up_5|NZ_CP045178.1_1070604_1075278_-	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein	NA|274aa|up_4|NZ_CP045178.1_1075535_1076357_-	NA	NA|510aa|up_3|NZ_CP045178.1_1076580_1078110_-	NA	NA|259aa|up_2|NZ_CP045178.1_1078574_1079351_+	pfam03746, LamB_YcsF, LamB/YcsF family	NA|219aa|up_1|NZ_CP045178.1_1079365_1080022_+	smart00796, AHS1, Allophanate hydrolase subunit 1	NA|296aa|up_0|NZ_CP045178.1_1080018_1080906_+	pfam02626, CT_A_B, Carboxyltransferase domain, subdomain A and B	NA|268aa|down_0|NZ_CP045178.1_1082011_1082815_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|269aa|down_1|NZ_CP045178.1_1082907_1083714_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|473aa|down_2|NZ_CP045178.1_1083981_1085400_-	NA	NA|131aa|down_3|NZ_CP045178.1_1085705_1086098_-	sd00045, ANK, ankyrin repeats	NA|65aa|down_4|NZ_CP045178.1_1086469_1086664_+	NA	NA|562aa|down_5|NZ_CP045178.1_1086770_1088456_+	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|505aa|down_6|NZ_CP045178.1_1088504_1090019_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|203aa|down_7|NZ_CP045178.1_1090293_1090902_+	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|256aa|down_8|NZ_CP045178.1_1090898_1091666_+	cd08561, GDPD_cytoplasmic_ScUgpQ2_like, Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins	NA|453aa|down_9|NZ_CP045178.1_1091732_1093091_+	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	3	1657958-1658027	2	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GCGGGGGGTACGGCGGCTCCGGCGG	25	1	2	1657983-1658002|1657983-1658002	NZ_CP045178.1_1658010-1658029|NZ_CP045178.1_1715486-1715505	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|263aa|up_6|NZ_CP045178.1_1647763_1648552_+,NA|71aa|down_2|NZ_CP045178.1_1660616_1660829_-	NA|319aa|up_9|NZ_CP045178.1_1645283_1646240_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|144aa|up_8|NZ_CP045178.1_1646351_1646783_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|264aa|up_7|NZ_CP045178.1_1646849_1647641_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|263aa|up_6|NZ_CP045178.1_1647763_1648552_+	NA	NA|80aa|up_5|NZ_CP045178.1_1648945_1649185_-	pfam03777, DUF320, Small secreted domain (DUF320)	NA|82aa|up_4|NZ_CP045178.1_1649421_1649667_-	pfam03777, DUF320, Small secreted domain (DUF320)	NA|214aa|up_3|NZ_CP045178.1_1649834_1650476_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|382aa|up_2|NZ_CP045178.1_1650501_1651647_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|291aa|up_1|NZ_CP045178.1_1652493_1653366_+	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains	NA|882aa|up_0|NZ_CP045178.1_1653607_1656253_-	cd03213, ABCG_EPDR, Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily	NA|406aa|down_0|NZ_CP045178.1_1658640_1659858_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|182aa|down_1|NZ_CP045178.1_1660000_1660546_-	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]	NA|71aa|down_2|NZ_CP045178.1_1660616_1660829_-	NA	NA|457aa|down_3|NZ_CP045178.1_1661383_1662754_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|235aa|down_4|NZ_CP045178.1_1662914_1663619_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|258aa|down_5|NZ_CP045178.1_1663774_1664548_-	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI	NA|235aa|down_6|NZ_CP045178.1_1664553_1665258_-	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase	NA|508aa|down_7|NZ_CP045178.1_1665502_1667026_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|77aa|down_8|NZ_CP045178.1_1667015_1667246_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|471aa|down_9|NZ_CP045178.1_1667587_1669000_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	4	2006256-2006879	1	CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GNCCGGCNCGGNGACCTNNCC	21	0	0	NA	NA	NA	11	11	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|19aa|up_8|NZ_CP045178.1_1996589_1996646_+,NA|397aa|down_8|NZ_CP045178.1_2017458_2018649_-	NA|450aa|up_9|NZ_CP045178.1_1995091_1996441_-	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|19aa|up_8|NZ_CP045178.1_1996589_1996646_+	NA	NA|641aa|up_7|NZ_CP045178.1_1996757_1998680_+	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|335aa|up_6|NZ_CP045178.1_1998794_1999799_-	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|343aa|up_5|NZ_CP045178.1_2000040_2001069_-	TIGR02483, ATP-dependent_6-phosphofructokinase_1, phosphofructokinase	NA|234aa|up_4|NZ_CP045178.1_2001282_2001984_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|405aa|up_3|NZ_CP045178.1_2002137_2003352_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|277aa|up_2|NZ_CP045178.1_2003687_2004518_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|260aa|up_1|NZ_CP045178.1_2004739_2005519_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|226aa|up_0|NZ_CP045178.1_2005511_2006189_+	pfam01040, UbiA, UbiA prenyltransferase family	NA|253aa|down_0|NZ_CP045178.1_2006940_2007699_-	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2	NA|314aa|down_1|NZ_CP045178.1_2007795_2008737_-	TIGR00744, Glucokinase_Glucose_kinase	NA|177aa|down_2|NZ_CP045178.1_2008999_2009530_-	pfam17230, DUF5304, Family of unknown function (DUF5304)	NA|412aa|down_3|NZ_CP045178.1_2009901_2011137_-	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|277aa|down_4|NZ_CP045178.1_2011813_2012644_-	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	NA|599aa|down_5|NZ_CP045178.1_2012963_2014760_+	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|381aa|down_6|NZ_CP045178.1_2014835_2015978_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|422aa|down_7|NZ_CP045178.1_2016156_2017422_+	pfam09594, GT87, Glycosyltransferase family 87	NA|397aa|down_8|NZ_CP045178.1_2017458_2018649_-	NA	NA|343aa|down_9|NZ_CP045178.1_2018734_2019763_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	5	2420956-2421076	3	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CGTGTCGCGGGGTCACCCCGTTCCGTGTC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|99aa|up_8|NZ_CP045178.1_2405177_2405474_+,NA|191aa|down_0|NZ_CP045178.1_2421326_2421899_+	NA|259aa|up_9|NZ_CP045178.1_2403117_2403894_+	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|99aa|up_8|NZ_CP045178.1_2405177_2405474_+	NA	NA|486aa|up_7|NZ_CP045178.1_2406280_2407738_+	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases	NA|578aa|up_6|NZ_CP045178.1_2408246_2409980_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|642aa|up_5|NZ_CP045178.1_2409979_2411905_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|392aa|up_4|NZ_CP045178.1_2412103_2413279_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|639aa|up_3|NZ_CP045178.1_2414074_2415991_-	PRK05667, dnaG, DNA primase; Validated	NA|428aa|up_2|NZ_CP045178.1_2416042_2417326_-	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	NA|484aa|up_1|NZ_CP045178.1_2417600_2419052_-	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|258aa|up_0|NZ_CP045178.1_2419825_2420599_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|191aa|down_0|NZ_CP045178.1_2421326_2421899_+	NA	NA|241aa|down_1|NZ_CP045178.1_2422183_2422906_+	cd05829, Sortase_F, Sortase domain found in the class F family of sortases	NA|260aa|down_2|NZ_CP045178.1_2423130_2423910_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|195aa|down_3|NZ_CP045178.1_2424076_2424661_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|270aa|down_4|NZ_CP045178.1_2424812_2425622_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|311aa|down_5|NZ_CP045178.1_2425911_2426844_+	PRK06197, PRK06197, short chain dehydrogenase; Provisional	NA|936aa|down_6|NZ_CP045178.1_2427284_2430092_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|401aa|down_7|NZ_CP045178.1_2430659_2431862_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|645aa|down_8|NZ_CP045178.1_2433786_2435721_+	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism]	NA|380aa|down_9|NZ_CP045178.1_2435809_2436949_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	6	2947461-2947591	4	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CTGCTCCGGCCCACCGGGCTGGTGCG	26	0	0	NA	NA	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|810aa|up_9|NZ_CP045178.1_2847278_2849708_+,NA|1170aa|up_8|NZ_CP045178.1_2849707_2853217_+,NA|277aa|up_7|NZ_CP045178.1_2853429_2854260_+,NA|400aa|up_6|NZ_CP045178.1_2854363_2855563_+,NA|288aa|up_5|NZ_CP045178.1_2855559_2856423_+,NA|380aa|up_4|NZ_CP045178.1_2856490_2857630_+,NA|255aa|up_0|NZ_CP045178.1_2864756_2865521_-,NA|90aa|down_8|NZ_CP045178.1_2962570_2962840_+	NA|810aa|up_9|NZ_CP045178.1_2847278_2849708_+	NA	NA|1170aa|up_8|NZ_CP045178.1_2849707_2853217_+	NA	NA|277aa|up_7|NZ_CP045178.1_2853429_2854260_+	NA	NA|400aa|up_6|NZ_CP045178.1_2854363_2855563_+	NA	NA|288aa|up_5|NZ_CP045178.1_2855559_2856423_+	NA	NA|380aa|up_4|NZ_CP045178.1_2856490_2857630_+	NA	NA|905aa|up_3|NZ_CP045178.1_2857990_2860705_-	cd04791, LanC_SerThrkinase, Lanthionine synthetase C-like domain associated with serine/threonine kinases	NA|618aa|up_2|NZ_CP045178.1_2861631_2863485_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|312aa|up_1|NZ_CP045178.1_2863668_2864604_-	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like	NA|255aa|up_0|NZ_CP045178.1_2864756_2865521_-	NA	NA|1365aa|down_0|NZ_CP045178.1_2949717_2953812_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|221aa|down_1|NZ_CP045178.1_2953940_2954603_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|213aa|down_2|NZ_CP045178.1_2954808_2955447_+	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|271aa|down_3|NZ_CP045178.1_2955608_2956421_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|955aa|down_4|NZ_CP045178.1_2956497_2959362_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|449aa|down_5|NZ_CP045178.1_2959633_2960980_-	pfam08817, YukD, WXG100 protein secretion system (Wss), protein YukD	NA|105aa|down_6|NZ_CP045178.1_2961108_2961423_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|128aa|down_7|NZ_CP045178.1_2961513_2961897_-	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|90aa|down_8|NZ_CP045178.1_2962570_2962840_+	NA	NA|58aa|down_9|NZ_CP045178.1_2963707_2963881_+	pfam05532, CsbD, CsbD-like
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	7	3430065-3430157	5	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GCCGACGCGGTGGCCGCCCCCGCCGTGGCGGCC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA|99aa|down_3|NZ_CP045178.1_3434464_3434761_+	NA|203aa|up_9|NZ_CP045178.1_3418799_3419408_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|918aa|up_8|NZ_CP045178.1_3419591_3422345_-	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|308aa|up_7|NZ_CP045178.1_3422791_3423715_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|226aa|up_6|NZ_CP045178.1_3423778_3424456_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|200aa|up_5|NZ_CP045178.1_3424677_3425277_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|142aa|up_4|NZ_CP045178.1_3425304_3425730_-	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|275aa|up_3|NZ_CP045178.1_3425759_3426584_-	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|166aa|up_2|NZ_CP045178.1_3426827_3427325_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|259aa|up_1|NZ_CP045178.1_3427283_3428060_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|151aa|up_0|NZ_CP045178.1_3428322_3428775_+	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|324aa|down_0|NZ_CP045178.1_3430404_3431376_-	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|360aa|down_1|NZ_CP045178.1_3431372_3432452_-	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate	NA|556aa|down_2|NZ_CP045178.1_3432699_3434367_+	cd11478, SLC5sbd_u2, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|99aa|down_3|NZ_CP045178.1_3434464_3434761_+	NA	NA|232aa|down_4|NZ_CP045178.1_3434957_3435653_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|655aa|down_5|NZ_CP045178.1_3435916_3437881_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|605aa|down_6|NZ_CP045178.1_3439035_3440850_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|298aa|down_7|NZ_CP045178.1_3441017_3441911_-	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|520aa|down_8|NZ_CP045178.1_3443454_3445014_-	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown]	NA|315aa|down_9|NZ_CP045178.1_3445769_3446714_-	cd01310, TatD_DNAse, TatD like proteins;  E
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	8	3523389-3523600	2,6,2	PILER-CR,CRISPRCasFinder,CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GTGGTCCCCGCACGTGCGGGGATGGTCCG,GTGGTCCCCGCACGTGCGGGGATGGTCCG,GTGGTCCCCGCACGTGCGGGGATGGTCCG	29,29,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	2,3,3	3	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|116aa|up_2|NZ_CP045178.1_3520026_3520374_-,NA|91aa|down_0|NZ_CP045178.1_3523826_3524099_-,NA|222aa|down_1|NZ_CP045178.1_3524405_3525071_+,NA|290aa|down_2|NZ_CP045178.1_3525241_3526111_+,NA|192aa|down_3|NZ_CP045178.1_3526353_3526929_-,NA|76aa|down_4|NZ_CP045178.1_3528887_3529115_-	NA|411aa|up_9|NZ_CP045178.1_3509891_3511124_+	pfam14027, DUF4243, Protein of unknown function (DUF4243)	NA|269aa|up_8|NZ_CP045178.1_3511203_3512010_-	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|159aa|up_7|NZ_CP045178.1_3512456_3512933_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|526aa|up_6|NZ_CP045178.1_3513070_3514648_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|222aa|up_5|NZ_CP045178.1_3515219_3515885_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|432aa|up_4|NZ_CP045178.1_3516295_3517591_+	TIGR03296, hypothetical_protein, M6 family metalloprotease domain	NA|274aa|up_3|NZ_CP045178.1_3518856_3519678_-	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family	NA|116aa|up_2|NZ_CP045178.1_3520026_3520374_-	NA	NA|406aa|up_1|NZ_CP045178.1_3520894_3522112_+	pfam01381, HTH_3, Helix-turn-helix	NA|221aa|up_0|NZ_CP045178.1_3522092_3522755_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|91aa|down_0|NZ_CP045178.1_3523826_3524099_-	NA	NA|222aa|down_1|NZ_CP045178.1_3524405_3525071_+	NA	NA|290aa|down_2|NZ_CP045178.1_3525241_3526111_+	NA	NA|192aa|down_3|NZ_CP045178.1_3526353_3526929_-	NA	NA|76aa|down_4|NZ_CP045178.1_3528887_3529115_-	NA	NA|251aa|down_5|NZ_CP045178.1_3529135_3529888_-	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|141aa|down_6|NZ_CP045178.1_3530419_3530842_+	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins	NA|383aa|down_7|NZ_CP045178.1_3531072_3532221_+	pfam06224, HTH_42, Winged helix DNA-binding domain	NA|211aa|down_8|NZ_CP045178.1_3532328_3532961_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|143aa|down_9|NZ_CP045178.1_3533119_3533548_+	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	9	3661377-3661500	7	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CCCGAGCCGCCGGACGGCTGAGCGGCGGGGGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|73aa|up_1|NZ_CP045178.1_3658559_3658778_-,NA|128aa|down_3|NZ_CP045178.1_3663974_3664358_-,NA|124aa|down_7|NZ_CP045178.1_3668573_3668945_-,NA|88aa|down_9|NZ_CP045178.1_3669875_3670139_-	NA|342aa|up_9|NZ_CP045178.1_3645927_3646953_+	pfam01032, FecCD, FecCD transport family	NA|265aa|up_8|NZ_CP045178.1_3648217_3649012_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|334aa|up_7|NZ_CP045178.1_3649254_3650256_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|451aa|up_6|NZ_CP045178.1_3650627_3651980_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|840aa|up_5|NZ_CP045178.1_3652169_3654689_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|257aa|up_4|NZ_CP045178.1_3654634_3655405_-	pfam04892, VanZ, VanZ like family	NA|548aa|up_3|NZ_CP045178.1_3655647_3657291_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|279aa|up_2|NZ_CP045178.1_3657441_3658278_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|73aa|up_1|NZ_CP045178.1_3658559_3658778_-	NA	NA|665aa|up_0|NZ_CP045178.1_3659381_3661376_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|233aa|down_0|NZ_CP045178.1_3661828_3662527_-	pfam03932, CutC, CutC family	NA|216aa|down_1|NZ_CP045178.1_3662837_3663485_+	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_2|NZ_CP045178.1_3663711_3663978_-	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|128aa|down_3|NZ_CP045178.1_3663974_3664358_-	NA	NA|366aa|down_4|NZ_CP045178.1_3664597_3665695_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|327aa|down_5|NZ_CP045178.1_3665896_3666877_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|547aa|down_6|NZ_CP045178.1_3666943_3668584_+	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|124aa|down_7|NZ_CP045178.1_3668573_3668945_-	NA	NA|194aa|down_8|NZ_CP045178.1_3669001_3669583_+	pfam04886, PT, PT repeat	NA|88aa|down_9|NZ_CP045178.1_3669875_3670139_-	NA
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	10	3663472-3663572	8	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	TGCTCAGGGCGTGAGCGAATTGAGCC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|73aa|up_2|NZ_CP045178.1_3658559_3658778_-,NA|128aa|down_1|NZ_CP045178.1_3663974_3664358_-,NA|124aa|down_5|NZ_CP045178.1_3668573_3668945_-,NA|88aa|down_7|NZ_CP045178.1_3669875_3670139_-	NA|265aa|up_9|NZ_CP045178.1_3648217_3649012_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|334aa|up_8|NZ_CP045178.1_3649254_3650256_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|451aa|up_7|NZ_CP045178.1_3650627_3651980_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|840aa|up_6|NZ_CP045178.1_3652169_3654689_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|257aa|up_5|NZ_CP045178.1_3654634_3655405_-	pfam04892, VanZ, VanZ like family	NA|548aa|up_4|NZ_CP045178.1_3655647_3657291_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|279aa|up_3|NZ_CP045178.1_3657441_3658278_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|73aa|up_2|NZ_CP045178.1_3658559_3658778_-	NA	NA|665aa|up_1|NZ_CP045178.1_3659381_3661376_+	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only]	NA|233aa|up_0|NZ_CP045178.1_3661828_3662527_-	pfam03932, CutC, CutC family	NA|89aa|down_0|NZ_CP045178.1_3663711_3663978_-	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|128aa|down_1|NZ_CP045178.1_3663974_3664358_-	NA	NA|366aa|down_2|NZ_CP045178.1_3664597_3665695_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|327aa|down_3|NZ_CP045178.1_3665896_3666877_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|547aa|down_4|NZ_CP045178.1_3666943_3668584_+	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|124aa|down_5|NZ_CP045178.1_3668573_3668945_-	NA	NA|194aa|down_6|NZ_CP045178.1_3669001_3669583_+	pfam04886, PT, PT repeat	NA|88aa|down_7|NZ_CP045178.1_3669875_3670139_-	NA	NA|289aa|down_8|NZ_CP045178.1_3670214_3671081_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|73aa|down_9|NZ_CP045178.1_3671086_3671305_+	pfam04149, DUF397, Domain of unknown function (DUF397)
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	11	4137389-4137586	3	CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GTCGGGAGCGNNNTCGGN	18	0	0	NA	NA	NA	4	4	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA|284aa|down_1|NZ_CP045178.1_4141026_4141878_-	NA|545aa|up_9|NZ_CP045178.1_4123234_4124869_-	cd00887, MoeA, MoeA family	NA|309aa|up_8|NZ_CP045178.1_4125195_4126122_-	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide	NA|521aa|up_7|NZ_CP045178.1_4126455_4128018_+	smart00020, Tryp_SPc, Trypsin-like serine protease	NA|603aa|up_6|NZ_CP045178.1_4128338_4130147_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|343aa|up_5|NZ_CP045178.1_4130146_4131175_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|442aa|up_4|NZ_CP045178.1_4131171_4132497_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|171aa|up_3|NZ_CP045178.1_4132668_4133181_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|199aa|up_2|NZ_CP045178.1_4133427_4134024_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|573aa|up_1|NZ_CP045178.1_4134376_4136095_+	TIGR02288, putative_ring-opening_enzyme, phenylacetic acid degradation protein paaN	NA|307aa|up_0|NZ_CP045178.1_4136238_4137159_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|115aa|down_0|NZ_CP045178.1_4140354_4140699_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|284aa|down_1|NZ_CP045178.1_4141026_4141878_-	NA	NA|486aa|down_2|NZ_CP045178.1_4141917_4143375_-	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252)	NA|132aa|down_3|NZ_CP045178.1_4143542_4143938_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|220aa|down_4|NZ_CP045178.1_4144067_4144727_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|283aa|down_5|NZ_CP045178.1_4145610_4146459_+	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|178aa|down_6|NZ_CP045178.1_4146469_4147003_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|521aa|down_7|NZ_CP045178.1_4147078_4148641_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|474aa|down_8|NZ_CP045178.1_4148667_4150089_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|486aa|down_9|NZ_CP045178.1_4150085_4151543_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	12	4278190-4278281	9	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CGGCTCCATGTTTCACGTGAAACAT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|395aa|up_5|NZ_CP045178.1_4268054_4269239_-,NA|105aa|down_6|NZ_CP045178.1_4288856_4289171_-	NA|373aa|up_9|NZ_CP045178.1_4264366_4265485_+	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|206aa|up_8|NZ_CP045178.1_4265812_4266430_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|116aa|up_7|NZ_CP045178.1_4266515_4266863_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|325aa|up_6|NZ_CP045178.1_4266908_4267883_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|395aa|up_5|NZ_CP045178.1_4268054_4269239_-	NA	NA|264aa|up_4|NZ_CP045178.1_4269235_4270027_-	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed	NA|575aa|up_3|NZ_CP045178.1_4270054_4271779_-	cd13973, PK_MviN-like, Pseudokinase domain of the peptidoglycan biosynthetic protein MviN	NA|737aa|up_2|NZ_CP045178.1_4271888_4274099_-	TIGR01695, Putative_lipid_II_flippase_MurJ, murein biosynthesis integral membrane protein MurJ	NA|793aa|up_1|NZ_CP045178.1_4274145_4276524_-	pfam06682, SARAF, SOCE-associated regulatory factor of calcium homoeostasis	NA|483aa|up_0|NZ_CP045178.1_4276718_4278167_+	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|361aa|down_0|NZ_CP045178.1_4279624_4280707_-	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type	NA|227aa|down_1|NZ_CP045178.1_4280762_4281443_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|893aa|down_2|NZ_CP045178.1_4281809_4284488_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|513aa|down_3|NZ_CP045178.1_4284741_4286280_+	COG5650, COG5650, Predicted integral membrane protein [Function unknown]	NA|344aa|down_4|NZ_CP045178.1_4286455_4287487_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|374aa|down_5|NZ_CP045178.1_4287558_4288680_-	pfam02388, FemAB, FemAB family	NA|105aa|down_6|NZ_CP045178.1_4288856_4289171_-	NA	NA|97aa|down_7|NZ_CP045178.1_4289438_4289729_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|203aa|down_8|NZ_CP045178.1_4289801_4290410_+	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional	NA|79aa|down_9|NZ_CP045178.1_4290453_4290690_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	13	4657659-4657787	10	CRISPRCasFinder	no	cas3	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Unclear	CGGCCTCGGAGGGATGGACATCGGCCGTGGTGGGACGGG	39	0	0	NA	NA	NA	1	1	Unclear	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|280aa|up_3|NZ_CP045178.1_4652072_4652912_+,NA|200aa|down_7|NZ_CP045178.1_4669387_4669987_+	NA|167aa|up_9|NZ_CP045178.1_4641876_4642377_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|459aa|up_8|NZ_CP045178.1_4642771_4644148_-	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional	NA|651aa|up_7|NZ_CP045178.1_4644620_4646573_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|815aa|up_6|NZ_CP045178.1_4646903_4649348_-	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|425aa|up_5|NZ_CP045178.1_4649693_4650968_+	cd10976, CE4_CDA_like_3, Putative catalytic domain of uncharacterized bacterial hypothetical proteins similar to insect chitin deacetylase-like proteins	NA|341aa|up_4|NZ_CP045178.1_4650948_4651971_-	cd02034, CooC1, accessory protein CooC1	NA|280aa|up_3|NZ_CP045178.1_4652072_4652912_+	NA	NA|279aa|up_2|NZ_CP045178.1_4653379_4654216_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|398aa|up_1|NZ_CP045178.1_4654758_4655952_+	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|402aa|up_0|NZ_CP045178.1_4656421_4657627_+	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|343aa|down_0|NZ_CP045178.1_4657881_4658910_+	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|253aa|down_1|NZ_CP045178.1_4658983_4659742_+	pfam00482, T2SSF, Type II secretion system (T2SS), protein F	NA|98aa|down_2|NZ_CP045178.1_4662087_4662381_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	cas3|810aa|down_3|NZ_CP045178.1_4662343_4664773_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|114aa|down_4|NZ_CP045178.1_4664881_4665223_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|145aa|down_5|NZ_CP045178.1_4665337_4665772_+	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain	NA|830aa|down_6|NZ_CP045178.1_4666617_4669107_+	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	NA|200aa|down_7|NZ_CP045178.1_4669387_4669987_+	NA	NA|830aa|down_8|NZ_CP045178.1_4672172_4674662_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|956aa|down_9|NZ_CP045178.1_4675684_4678552_+	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	14	4829924-4830127	4	CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CCTCCACCGGGNNTGGGC	18	0	0	NA	NA	NA	5	5	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|110aa|up_4|NZ_CP045178.1_4797799_4798129_+,NA|167aa|up_2|NZ_CP045178.1_4798724_4799225_+,NA|139aa|up_0|NZ_CP045178.1_4803240_4803657_+,NA|281aa|down_1|NZ_CP045178.1_4867711_4868554_+	NA|1105aa|up_9|NZ_CP045178.1_4784857_4788172_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|457aa|up_8|NZ_CP045178.1_4788520_4789891_+	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|1321aa|up_7|NZ_CP045178.1_4790370_4794333_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|467aa|up_6|NZ_CP045178.1_4794683_4796084_+	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|533aa|up_5|NZ_CP045178.1_4796100_4797699_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|110aa|up_4|NZ_CP045178.1_4797799_4798129_+	NA	NA|111aa|up_3|NZ_CP045178.1_4798233_4798566_+	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|167aa|up_2|NZ_CP045178.1_4798724_4799225_+	NA	NA|155aa|up_1|NZ_CP045178.1_4802779_4803244_+	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family	NA|139aa|up_0|NZ_CP045178.1_4803240_4803657_+	NA	NA|6254aa|down_0|NZ_CP045178.1_4848942_4867704_+	NF012197, lonely_Cys, lonely Cys domain-containing protein	NA|281aa|down_1|NZ_CP045178.1_4867711_4868554_+	NA	NA|1449aa|down_2|NZ_CP045178.1_4868937_4873284_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|549aa|down_3|NZ_CP045178.1_4873316_4874963_+	pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain	NA|300aa|down_4|NZ_CP045178.1_4875773_4876673_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|150aa|down_5|NZ_CP045178.1_4877054_4877504_+	cd02072, Glm_B12_BD, B12 binding domain of glutamate mutase (Glm)	NA|452aa|down_6|NZ_CP045178.1_4877518_4878874_+	cd00245, Glm_e, Coenzyme B12-dependent glutamate mutase epsilon subunit-like family; contains proteins similar to Clostridium cochlearium glutamate mutase (Glm) and Streptomyces tendae Tu901 NikV	NA|295aa|down_7|NZ_CP045178.1_4879100_4879985_+	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold	NA|334aa|down_8|NZ_CP045178.1_4880085_4881087_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|348aa|down_9|NZ_CP045178.1_4881083_4882127_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	15	4894754-4894861	11	CRISPRCasFinder	no	csa3	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Type I-A	GAGTCCCAGCCGTACGGTCAAGGCGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA|194aa|down_3|NZ_CP045178.1_4898179_4898761_-,NA|209aa|down_4|NZ_CP045178.1_4898757_4899384_-,NA|165aa|down_5|NZ_CP045178.1_4899380_4899875_-,NA|103aa|down_7|NZ_CP045178.1_4901118_4901427_-,NA|438aa|down_9|NZ_CP045178.1_4902462_4903776_-	NA|421aa|up_9|NZ_CP045178.1_4882033_4883296_+	cd04246, AAK_AK-DapG-like, AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes	NA|346aa|up_8|NZ_CP045178.1_4883299_4884337_+	TIGR03946, viomycin_VioC, arginine beta-hydroxylase, Fe(II)/alpha-ketoglutarate-dependent	NA|469aa|up_7|NZ_CP045178.1_4884919_4886326_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|252aa|up_6|NZ_CP045178.1_4886373_4887129_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|299aa|up_5|NZ_CP045178.1_4887125_4888022_+	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|133aa|up_4|NZ_CP045178.1_4888077_4888476_-	pfam12973, Cupin_7, ChrR Cupin-like domain	NA|666aa|up_3|NZ_CP045178.1_4889208_4891206_-	pfam13454, NAD_binding_9, FAD-NAD(P)-binding	NA|229aa|up_2|NZ_CP045178.1_4891360_4892047_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|397aa|up_1|NZ_CP045178.1_4892131_4893322_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|211aa|up_0|NZ_CP045178.1_4893434_4894067_+	cd19078, AKR_AKR13C1_2, AKR13C family of aldo-keto reductase (AKR)	NA|192aa|down_0|NZ_CP045178.1_4894882_4895458_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|489aa|down_1|NZ_CP045178.1_4895680_4897147_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	csa3|298aa|down_2|NZ_CP045178.1_4897211_4898105_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|194aa|down_3|NZ_CP045178.1_4898179_4898761_-	NA	NA|209aa|down_4|NZ_CP045178.1_4898757_4899384_-	NA	NA|165aa|down_5|NZ_CP045178.1_4899380_4899875_-	NA	NA|415aa|down_6|NZ_CP045178.1_4899871_4901116_-	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|103aa|down_7|NZ_CP045178.1_4901118_4901427_-	NA	NA|189aa|down_8|NZ_CP045178.1_4901870_4902437_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|438aa|down_9|NZ_CP045178.1_4902462_4903776_-	NA
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	16	4994405-4994565	12	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GGTGCGGCTGGGCGCGGTGTGCG	23	0	0	NA	NA	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA	NA|376aa|up_9|NZ_CP045178.1_4981679_4982807_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|377aa|up_8|NZ_CP045178.1_4983017_4984148_+	TIGR02432, tRNAIle-lysidine_synthase, tRNA(Ile)-lysidine synthetase, N-terminal domain	NA|188aa|up_7|NZ_CP045178.1_4984205_4984769_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|683aa|up_6|NZ_CP045178.1_4984973_4987022_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|202aa|up_5|NZ_CP045178.1_4987190_4987796_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|164aa|up_4|NZ_CP045178.1_4987966_4988458_-	pfam11377, DUF3180, Protein of unknown function (DUF3180)	NA|203aa|up_3|NZ_CP045178.1_4988645_4989254_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|120aa|up_2|NZ_CP045178.1_4989250_4989610_-	pfam02152, FolB, Dihydroneopterin aldolase	NA|165aa|up_1|NZ_CP045178.1_4990021_4990516_-	pfam13474, SnoaL_3, SnoaL-like domain	NA|287aa|up_0|NZ_CP045178.1_4990512_4991373_-	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|382aa|down_0|NZ_CP045178.1_4994589_4995735_+	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|394aa|down_1|NZ_CP045178.1_4996001_4997183_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|243aa|down_2|NZ_CP045178.1_4997461_4998190_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|264aa|down_3|NZ_CP045178.1_4998186_4998978_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|328aa|down_4|NZ_CP045178.1_4999134_5000118_+	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold	NA|166aa|down_5|NZ_CP045178.1_5001256_5001754_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|505aa|down_6|NZ_CP045178.1_5001980_5003495_-	COG3428, COG3428, Predicted membrane protein [Function unknown]	NA|178aa|down_7|NZ_CP045178.1_5003506_5004040_-	COG3402, COG3402, Uncharacterized conserved protein [Function unknown]	NA|381aa|down_8|NZ_CP045178.1_5004071_5005214_+	COG0649, NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion]	NA|444aa|down_9|NZ_CP045178.1_5005178_5006510_-	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	17	5571804-5571929	13	CRISPRCasFinder	no	cas6e,cas5,cas7,cse2gr11,cas8e	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Type I-E	TGTGGGCCGGGGCTGGGGTCCGGGGGCCGGG	31	0	0	NA	NA	NA	1	1	TypeI-E	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|1323aa|up_4|NZ_CP045178.1_5563418_5567387_+,NA|116aa|up_1|NZ_CP045178.1_5570401_5570749_-,NA|156aa|down_2|NZ_CP045178.1_5575884_5576352_-,NA|104aa|down_8|NZ_CP045178.1_5580142_5580454_-	cas6e|255aa|up_9|NZ_CP045178.1_5557200_5557965_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|300aa|up_8|NZ_CP045178.1_5557946_5558846_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|491aa|up_7|NZ_CP045178.1_5558842_5560315_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|185aa|up_6|NZ_CP045178.1_5560250_5560805_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|up_5|NZ_CP045178.1_5560797_5562366_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	NA|1323aa|up_4|NZ_CP045178.1_5563418_5567387_+	NA	NA|679aa|up_3|NZ_CP045178.1_5567729_5569766_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|215aa|up_2|NZ_CP045178.1_5569836_5570481_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|116aa|up_1|NZ_CP045178.1_5570401_5570749_-	NA	NA|238aa|up_0|NZ_CP045178.1_5571073_5571787_-	pfam03006, HlyIII, Haemolysin-III related	NA|399aa|down_0|NZ_CP045178.1_5572033_5573230_-	cd06268, PBP1_ABC_transporter_LIVBP-like, periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily	NA|638aa|down_1|NZ_CP045178.1_5573685_5575599_+	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|156aa|down_2|NZ_CP045178.1_5575884_5576352_-	NA	NA|404aa|down_3|NZ_CP045178.1_5576487_5577699_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|81aa|down_4|NZ_CP045178.1_5577912_5578155_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|263aa|down_5|NZ_CP045178.1_5578151_5578940_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|142aa|down_6|NZ_CP045178.1_5579056_5579482_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|188aa|down_7|NZ_CP045178.1_5579497_5580061_-	pfam04978, DUF664, Protein of unknown function (DUF664)	NA|104aa|down_8|NZ_CP045178.1_5580142_5580454_-	NA	NA|610aa|down_9|NZ_CP045178.1_5580772_5582602_+	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing)
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	18	5717134-5717231	14	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	AGCCCGGAGCGGCCGGGTCGGAGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|339aa|up_9|NZ_CP045178.1_5704383_5705400_+,NA|65aa|up_7|NZ_CP045178.1_5707851_5708046_+,NA|118aa|up_5|NZ_CP045178.1_5709286_5709640_+,NA	NA|339aa|up_9|NZ_CP045178.1_5704383_5705400_+	NA	NA|709aa|up_8|NZ_CP045178.1_5705563_5707690_-	pfam00326, Peptidase_S9, Prolyl oligopeptidase family	NA|65aa|up_7|NZ_CP045178.1_5707851_5708046_+	NA	NA|344aa|up_6|NZ_CP045178.1_5708108_5709140_+	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase	NA|118aa|up_5|NZ_CP045178.1_5709286_5709640_+	NA	NA|735aa|up_4|NZ_CP045178.1_5709813_5712018_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|247aa|up_3|NZ_CP045178.1_5713385_5714126_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|368aa|up_2|NZ_CP045178.1_5714290_5715394_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|251aa|up_1|NZ_CP045178.1_5715390_5716143_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|282aa|up_0|NZ_CP045178.1_5716187_5717033_-	pfam13369, Transglut_core2, Transglutaminase-like superfamily	NA|341aa|down_0|NZ_CP045178.1_5717267_5718290_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|107aa|down_1|NZ_CP045178.1_5718432_5718753_+	COG1146, COG1146, Ferredoxin [Energy production and conversion]	NA|374aa|down_2|NZ_CP045178.1_5718934_5720056_+	PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed	NA|147aa|down_3|NZ_CP045178.1_5720315_5720756_-	COG5444, COG5444, Uncharacterized conserved protein [Function unknown]	NA|369aa|down_4|NZ_CP045178.1_5722443_5723550_+	PRK13007, PRK13007, succinyl-diaminopimelate desuccinylase; Reviewed	NA|250aa|down_5|NZ_CP045178.1_5723670_5724420_+	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|287aa|down_6|NZ_CP045178.1_5724479_5725340_-	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|200aa|down_7|NZ_CP045178.1_5725482_5726082_+	TIGR03544, cell_division_initiation_protein_DivIVA, DivIVA domain	NA|211aa|down_8|NZ_CP045178.1_5726078_5726711_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|267aa|down_9|NZ_CP045178.1_5726720_5727521_-	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	19	5870718-5870809	15	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CACCGATGTCGGGAGGTGCGGCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|81aa|up_4|NZ_CP045178.1_5867127_5867370_+,NA|285aa|down_2|NZ_CP045178.1_5873523_5874378_+,NA|62aa|down_3|NZ_CP045178.1_5874423_5874609_-	NA|210aa|up_9|NZ_CP045178.1_5862276_5862906_-	pfam11706, zf-CGNR, CGNR zinc finger	NA|254aa|up_8|NZ_CP045178.1_5863007_5863769_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|251aa|up_7|NZ_CP045178.1_5863895_5864648_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|312aa|up_6|NZ_CP045178.1_5864686_5865622_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|325aa|up_5|NZ_CP045178.1_5865736_5866711_-	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|81aa|up_4|NZ_CP045178.1_5867127_5867370_+	NA	NA|402aa|up_3|NZ_CP045178.1_5867365_5868571_+	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|325aa|up_2|NZ_CP045178.1_5868759_5869734_+	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family	NA|70aa|up_1|NZ_CP045178.1_5869879_5870089_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|188aa|up_0|NZ_CP045178.1_5870088_5870652_+	CHL00095, clpC, Clp protease ATP binding subunit	NA|388aa|down_0|NZ_CP045178.1_5870909_5872073_-	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|343aa|down_1|NZ_CP045178.1_5872074_5873103_-	pfam13349, DUF4097, Putative adhesin	NA|285aa|down_2|NZ_CP045178.1_5873523_5874378_+	NA	NA|62aa|down_3|NZ_CP045178.1_5874423_5874609_-	NA	NA|1278aa|down_4|NZ_CP045178.1_5874775_5878609_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|365aa|down_5|NZ_CP045178.1_5878874_5879969_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|down_6|NZ_CP045178.1_5880036_5880777_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|228aa|down_7|NZ_CP045178.1_5880984_5881668_-	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|806aa|down_8|NZ_CP045178.1_5882428_5884846_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|279aa|down_9|NZ_CP045178.1_5886170_5887007_-	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	20	5895945-5896063	16	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CTGCCGTCCAAGGTCCCTGCCGT	23	0	0	NA	NA	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|283aa|up_5|NZ_CP045178.1_5888213_5889062_-,NA|106aa|down_1|NZ_CP045178.1_5897386_5897704_-,NA|141aa|down_9|NZ_CP045178.1_5906821_5907244_-	NA|228aa|up_9|NZ_CP045178.1_5880984_5881668_-	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|806aa|up_8|NZ_CP045178.1_5882428_5884846_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|279aa|up_7|NZ_CP045178.1_5886170_5887007_-	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans	NA|149aa|up_6|NZ_CP045178.1_5887584_5888031_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|283aa|up_5|NZ_CP045178.1_5888213_5889062_-	NA	NA|1148aa|up_4|NZ_CP045178.1_5889410_5892854_+	cd00075, HATPase, Histidine kinase-like ATPase domain	NA|178aa|up_3|NZ_CP045178.1_5892850_5893384_+	smart00960, Robl_LC7, Roadblock/LC7 domain	NA|140aa|up_2|NZ_CP045178.1_5893380_5893800_+	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|212aa|up_1|NZ_CP045178.1_5893780_5894416_+	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|413aa|up_0|NZ_CP045178.1_5894484_5895723_+	pfam17885, Smoa_sbd, Styrene monooxygenase A putative substrate binding domain	NA|385aa|down_0|NZ_CP045178.1_5896093_5897248_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|106aa|down_1|NZ_CP045178.1_5897386_5897704_-	NA	NA|310aa|down_2|NZ_CP045178.1_5897901_5898831_-	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|333aa|down_3|NZ_CP045178.1_5899042_5900041_+	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|486aa|down_4|NZ_CP045178.1_5900164_5901622_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|478aa|down_5|NZ_CP045178.1_5901618_5903052_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|268aa|down_6|NZ_CP045178.1_5903838_5904642_+	pfam08378, NERD, Nuclease-related domain	NA|296aa|down_7|NZ_CP045178.1_5904678_5905566_-	cd04863, MtLigD_Pol_like, MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD	NA|398aa|down_8|NZ_CP045178.1_5905608_5906802_+	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|141aa|down_9|NZ_CP045178.1_5906821_5907244_-	NA
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	21	6053888-6054026	17	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GCCGGTCGAGCCATCTGGTCGGACCGGGCCCGCCGCCGGTCGA	43	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|340aa|up_9|NZ_CP045178.1_6038696_6039716_-,NA|221aa|up_8|NZ_CP045178.1_6039861_6040524_+,NA|74aa|up_7|NZ_CP045178.1_6040615_6040837_+,NA|445aa|up_4|NZ_CP045178.1_6045992_6047327_+,NA|201aa|down_9|NZ_CP045178.1_6063374_6063977_-	NA|340aa|up_9|NZ_CP045178.1_6038696_6039716_-	NA	NA|221aa|up_8|NZ_CP045178.1_6039861_6040524_+	NA	NA|74aa|up_7|NZ_CP045178.1_6040615_6040837_+	NA	NA|652aa|up_6|NZ_CP045178.1_6041020_6042976_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|624aa|up_5|NZ_CP045178.1_6042972_6044844_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|445aa|up_4|NZ_CP045178.1_6045992_6047327_+	NA	NA|743aa|up_3|NZ_CP045178.1_6047442_6049671_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|413aa|up_2|NZ_CP045178.1_6050476_6051715_+	pfam17964, Big_10, Bacterial Ig domain	NA|256aa|up_1|NZ_CP045178.1_6051811_6052579_+	PRK08138, PRK08138, enoyl-CoA hydratase; Provisional	NA|169aa|up_0|NZ_CP045178.1_6053008_6053515_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|262aa|down_0|NZ_CP045178.1_6054498_6055284_+	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|417aa|down_1|NZ_CP045178.1_6055283_6056534_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|71aa|down_2|NZ_CP045178.1_6056648_6056861_+	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	NA|299aa|down_3|NZ_CP045178.1_6056962_6057859_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|238aa|down_4|NZ_CP045178.1_6058847_6059561_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|184aa|down_5|NZ_CP045178.1_6059646_6060198_-	pfam01183, Glyco_hydro_25, Glycosyl hydrolases family 25	NA|69aa|down_6|NZ_CP045178.1_6060786_6060993_+	pfam11753, DUF3310, Protein of unknwon function (DUF3310)	NA|268aa|down_7|NZ_CP045178.1_6060989_6061793_+	pfam00149, Metallophos, Calcineurin-like phosphoesterase	NA|301aa|down_8|NZ_CP045178.1_6061937_6062840_-	cd16277, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|201aa|down_9|NZ_CP045178.1_6063374_6063977_-	NA
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	22	6194519-6194675	3	PILER-CR	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CGCGCCGTGCGGCGCGA	17	0	0	NA	NA	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA	NA|380aa|up_9|NZ_CP045178.1_6178992_6180132_-	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|309aa|up_8|NZ_CP045178.1_6180331_6181258_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|544aa|up_7|NZ_CP045178.1_6181455_6183087_+	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|178aa|up_6|NZ_CP045178.1_6183258_6183792_+	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain	NA|599aa|up_5|NZ_CP045178.1_6184501_6186298_+	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5	NA|524aa|up_4|NZ_CP045178.1_6186891_6188463_-	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|347aa|up_3|NZ_CP045178.1_6188592_6189633_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|362aa|up_2|NZ_CP045178.1_6189905_6190991_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|472aa|up_1|NZ_CP045178.1_6191208_6192624_-	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like	NA|443aa|up_0|NZ_CP045178.1_6192994_6194323_+	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters	NA|552aa|down_0|NZ_CP045178.1_6195004_6196660_+	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional	NA|457aa|down_1|NZ_CP045178.1_6197227_6198598_+	pfam12810, Gly_rich, Glycine rich protein	NA|205aa|down_2|NZ_CP045178.1_6198849_6199464_-	pfam04264, YceI, YceI-like domain	NA|528aa|down_3|NZ_CP045178.1_6199876_6201460_+	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit	NA|80aa|down_4|NZ_CP045178.1_6201519_6201759_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|194aa|down_5|NZ_CP045178.1_6202034_6202616_-	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|221aa|down_6|NZ_CP045178.1_6202596_6203259_-	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|138aa|down_7|NZ_CP045178.1_6203351_6203765_-	pfam03259, Robl_LC7, Roadblock/LC7 domain	NA|1196aa|down_8|NZ_CP045178.1_6203775_6207363_-	pfam08376, NIT, Nitrate and nitrite sensing	NA|194aa|down_9|NZ_CP045178.1_6207698_6208280_-	COG2229, COG2229, Predicted GTPase [General function prediction only]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	23	6333412-6333496	18	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	TGCCACCCGCGGCCGCACCGCGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|161aa|up_5|NZ_CP045178.1_6323474_6323957_+,NA|759aa|up_2|NZ_CP045178.1_6327125_6329402_+,NA	NA|389aa|up_9|NZ_CP045178.1_6318355_6319522_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|311aa|up_8|NZ_CP045178.1_6319518_6320451_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]	NA|270aa|up_7|NZ_CP045178.1_6320450_6321260_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|472aa|up_6|NZ_CP045178.1_6321323_6322739_+	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase	NA|161aa|up_5|NZ_CP045178.1_6323474_6323957_+	NA	NA|299aa|up_4|NZ_CP045178.1_6324029_6324926_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|444aa|up_3|NZ_CP045178.1_6325079_6326411_-	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase	NA|759aa|up_2|NZ_CP045178.1_6327125_6329402_+	NA	NA|558aa|up_1|NZ_CP045178.1_6329547_6331221_+	pfam07905, PucR, Purine catabolism regulatory protein-like family	NA|482aa|up_0|NZ_CP045178.1_6331774_6333220_+	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like	NA|657aa|down_0|NZ_CP045178.1_6333648_6335619_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|277aa|down_1|NZ_CP045178.1_6335802_6336633_+	TIGR03827, GNAT_ablB, putative beta-lysine N-acetyltransferase	NA|433aa|down_2|NZ_CP045178.1_6336685_6337984_+	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|434aa|down_3|NZ_CP045178.1_6337980_6339282_+	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|385aa|down_4|NZ_CP045178.1_6339454_6340609_+	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA|281aa|down_5|NZ_CP045178.1_6341201_6342044_+	pfam13312, DUF4081, Domain of unknown function (DUF4081)	NA|257aa|down_6|NZ_CP045178.1_6342192_6342963_+	pfam07920, DUF1684, Protein of unknown function (DUF1684)	NA|195aa|down_7|NZ_CP045178.1_6343345_6343930_+	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|564aa|down_8|NZ_CP045178.1_6343999_6345691_+	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|307aa|down_9|NZ_CP045178.1_6346244_6347165_-	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	24	6374445-6374588	19	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	CCTCGCGCGCCGTACGGCGCGCCA	24	0	0	NA	NA	NA	2	2	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA|71aa|down_0|NZ_CP045178.1_6374771_6374984_-,NA|152aa|down_5|NZ_CP045178.1_6380662_6381118_+,NA|186aa|down_6|NZ_CP045178.1_6381206_6381764_-,NA|80aa|down_7|NZ_CP045178.1_6381887_6382127_-	NA|288aa|up_9|NZ_CP045178.1_6358637_6359501_-	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed	NA|236aa|up_8|NZ_CP045178.1_6359596_6360304_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|180aa|up_7|NZ_CP045178.1_6360464_6361004_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|347aa|up_6|NZ_CP045178.1_6361331_6362372_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|401aa|up_5|NZ_CP045178.1_6362368_6363571_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|up_4|NZ_CP045178.1_6363567_6364509_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|358aa|up_3|NZ_CP045178.1_6364517_6365591_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|628aa|up_2|NZ_CP045178.1_6366185_6368069_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|1547aa|up_1|NZ_CP045178.1_6368265_6372906_-	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|93aa|up_0|NZ_CP045178.1_6373779_6374058_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|71aa|down_0|NZ_CP045178.1_6374771_6374984_-	NA	NA|96aa|down_1|NZ_CP045178.1_6375483_6375771_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|740aa|down_2|NZ_CP045178.1_6376227_6378447_+	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|460aa|down_3|NZ_CP045178.1_6378443_6379823_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|251aa|down_4|NZ_CP045178.1_6379897_6380650_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|152aa|down_5|NZ_CP045178.1_6380662_6381118_+	NA	NA|186aa|down_6|NZ_CP045178.1_6381206_6381764_-	NA	NA|80aa|down_7|NZ_CP045178.1_6381887_6382127_-	NA	NA|305aa|down_8|NZ_CP045178.1_6382720_6383635_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|562aa|down_9|NZ_CP045178.1_6383780_6385466_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	25	6879176-6879510	4,20,5	PILER-CR,CRISPRCasFinder,CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GTCGCCCCCGCGCCTGCGGGGATGTTCC,GTCGCCCCCGCGCCTGCGGGGATGTTCC,GTCGCCCCCGCGCCTGCGGGGATGTTCC	28,28,28	0	0	NA	NA	NA:NA:NA	4,5,4	5	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|138aa|up_1|NZ_CP045178.1_6877261_6877675_-,NA|197aa|up_0|NZ_CP045178.1_6878005_6878596_+,NA|62aa|down_0|NZ_CP045178.1_6880131_6880317_+,NA|103aa|down_3|NZ_CP045178.1_6882599_6882908_+	NA|296aa|up_9|NZ_CP045178.1_6869018_6869906_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|113aa|up_8|NZ_CP045178.1_6869902_6870241_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|541aa|up_7|NZ_CP045178.1_6870796_6872419_+	cd06842, PLPDE_III_Y4yA_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Y4yA	NA|445aa|up_6|NZ_CP045178.1_6872415_6873750_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|403aa|up_5|NZ_CP045178.1_6873753_6874962_+	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|253aa|up_4|NZ_CP045178.1_6875112_6875871_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|312aa|up_3|NZ_CP045178.1_6875867_6876803_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|146aa|up_2|NZ_CP045178.1_6876929_6877367_+	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|138aa|up_1|NZ_CP045178.1_6877261_6877675_-	NA	NA|197aa|up_0|NZ_CP045178.1_6878005_6878596_+	NA	NA|62aa|down_0|NZ_CP045178.1_6880131_6880317_+	NA	NA|473aa|down_1|NZ_CP045178.1_6880328_6881747_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|185aa|down_2|NZ_CP045178.1_6881793_6882348_-	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|103aa|down_3|NZ_CP045178.1_6882599_6882908_+	NA	NA|262aa|down_4|NZ_CP045178.1_6883034_6883820_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|440aa|down_5|NZ_CP045178.1_6884089_6885409_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|319aa|down_6|NZ_CP045178.1_6885408_6886365_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|283aa|down_7|NZ_CP045178.1_6886361_6887210_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|404aa|down_8|NZ_CP045178.1_6887327_6888539_+	PRK15072, PRK15072, D-galactonate dehydratase family protein	NA|160aa|down_9|NZ_CP045178.1_6888770_6889250_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	26	7112950-7113048	21	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	TGACGCCCGTCACCCCGACGGGCGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|116aa|up_0|NZ_CP045178.1_7110419_7110767_-,NA	NA|466aa|up_9|NZ_CP045178.1_7098898_7100296_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|429aa|up_8|NZ_CP045178.1_7100758_7102045_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|212aa|up_7|NZ_CP045178.1_7102069_7102705_+	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain	NA|260aa|up_6|NZ_CP045178.1_7102798_7103578_+	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|248aa|up_5|NZ_CP045178.1_7105123_7105867_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|303aa|up_4|NZ_CP045178.1_7105880_7106789_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|215aa|up_3|NZ_CP045178.1_7106855_7107500_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|302aa|up_2|NZ_CP045178.1_7107496_7108402_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|516aa|up_1|NZ_CP045178.1_7108452_7110000_-	pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family)	NA|116aa|up_0|NZ_CP045178.1_7110419_7110767_-	NA	NA|233aa|down_0|NZ_CP045178.1_7113106_7113805_-	pfam03413, PepSY, Peptidase propeptide and YPEB domain	NA|69aa|down_1|NZ_CP045178.1_7114069_7114276_-	cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins	NA|134aa|down_2|NZ_CP045178.1_7114689_7115091_+	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|281aa|down_3|NZ_CP045178.1_7115320_7116163_+	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases)	NA|428aa|down_4|NZ_CP045178.1_7116159_7117443_+	cd00610, OAT_like, Acetyl ornithine aminotransferase family	NA|467aa|down_5|NZ_CP045178.1_7117634_7119035_+	PRK08323, PRK08323, phenylhydantoinase; Validated	NA|344aa|down_6|NZ_CP045178.1_7119051_7120083_+	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family	NA|339aa|down_7|NZ_CP045178.1_7120157_7121174_-	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme	NA|382aa|down_8|NZ_CP045178.1_7121386_7122532_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|231aa|down_9|NZ_CP045178.1_7122528_7123221_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	27	7362359-7362442	22	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GGGTGGAGCCACGGCACGCGCGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|127aa|up_8|NZ_CP045178.1_7351309_7351690_-,NA	NA|264aa|up_9|NZ_CP045178.1_7350238_7351030_+	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|127aa|up_8|NZ_CP045178.1_7351309_7351690_-	NA	NA|207aa|up_7|NZ_CP045178.1_7351752_7352373_-	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal	NA|410aa|up_6|NZ_CP045178.1_7352465_7353695_-	cd01076, NAD_bind_1_Glu_DH, NAD(P) binding domain of glutamate dehydrogenase, subgroup 1	NA|546aa|up_5|NZ_CP045178.1_7353691_7355329_-	PRK07524, PRK07524, 5-guanidino-2-oxopentanoate decarboxylase	NA|421aa|up_4|NZ_CP045178.1_7355898_7357161_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|384aa|up_3|NZ_CP045178.1_7357507_7358659_-	pfam00089, Trypsin, Trypsin	NA|108aa|up_2|NZ_CP045178.1_7358782_7359106_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|529aa|up_1|NZ_CP045178.1_7359280_7360867_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|268aa|up_0|NZ_CP045178.1_7361281_7362085_+	cd07580, nitrilase_2, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|249aa|down_0|NZ_CP045178.1_7362499_7363246_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|254aa|down_1|NZ_CP045178.1_7363242_7364004_-	cd05233, SDR_c, classical (c) SDRs	NA|441aa|down_2|NZ_CP045178.1_7364024_7365347_-	PRK12447, PRK12447, histidinol dehydrogenase; Reviewed	NA|253aa|down_3|NZ_CP045178.1_7365458_7366217_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|377aa|down_4|NZ_CP045178.1_7366279_7367410_-	cd02225, cupin_PA3510-like, Pseudomonas aeruginosa PA3510 and related proteins, cupin domain	NA|338aa|down_5|NZ_CP045178.1_7367771_7368785_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|386aa|down_6|NZ_CP045178.1_7369193_7370351_+	PRK08255, PRK08255, bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase	NA|300aa|down_7|NZ_CP045178.1_7370484_7371384_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|443aa|down_8|NZ_CP045178.1_7371597_7372926_+	PRK12447, PRK12447, histidinol dehydrogenase; Reviewed	NA|425aa|down_9|NZ_CP045178.1_7372922_7374197_+	pfam07366, SnoaL, SnoaL-like polyketide cyclase
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	28	7367413-7367510	23	CRISPRCasFinder	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GCCCGGGTGCGGTACTCGCGGCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA,NA	NA|421aa|up_9|NZ_CP045178.1_7355898_7357161_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|384aa|up_8|NZ_CP045178.1_7357507_7358659_-	pfam00089, Trypsin, Trypsin	NA|108aa|up_7|NZ_CP045178.1_7358782_7359106_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|529aa|up_6|NZ_CP045178.1_7359280_7360867_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|268aa|up_5|NZ_CP045178.1_7361281_7362085_+	cd07580, nitrilase_2, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|249aa|up_4|NZ_CP045178.1_7362499_7363246_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|254aa|up_3|NZ_CP045178.1_7363242_7364004_-	cd05233, SDR_c, classical (c) SDRs	NA|441aa|up_2|NZ_CP045178.1_7364024_7365347_-	PRK12447, PRK12447, histidinol dehydrogenase; Reviewed	NA|253aa|up_1|NZ_CP045178.1_7365458_7366217_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|377aa|up_0|NZ_CP045178.1_7366279_7367410_-	cd02225, cupin_PA3510-like, Pseudomonas aeruginosa PA3510 and related proteins, cupin domain	NA|338aa|down_0|NZ_CP045178.1_7367771_7368785_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|386aa|down_1|NZ_CP045178.1_7369193_7370351_+	PRK08255, PRK08255, bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase	NA|300aa|down_2|NZ_CP045178.1_7370484_7371384_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|443aa|down_3|NZ_CP045178.1_7371597_7372926_+	PRK12447, PRK12447, histidinol dehydrogenase; Reviewed	NA|425aa|down_4|NZ_CP045178.1_7372922_7374197_+	pfam07366, SnoaL, SnoaL-like polyketide cyclase	NA|145aa|down_5|NZ_CP045178.1_7377076_7377511_+	pfam03259, Robl_LC7, Roadblock/LC7 domain	NA|124aa|down_6|NZ_CP045178.1_7377513_7377885_+	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|198aa|down_7|NZ_CP045178.1_7377862_7378456_+	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|186aa|down_8|NZ_CP045178.1_7378452_7379010_+	pfam01590, GAF, GAF domain	NA|321aa|down_9|NZ_CP045178.1_7379200_7380163_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33
GCF_009296025.1_ASM929602v1	NZ_CP045178	Streptomyces tsukubensis strain AT3 chromosome, complete genome	29	8355729-8356072	6	CRT	no		csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	Orphan	GAGCTGCGCGANGAGCAGAA	20	0	0	NA	NA	NA	6	6	Orphan	csa3,casR,cas3,DEDDh,WYL,cas4,Cas9_archaeal,PD-DExK,cas6e,cas5,cas7,cse2gr11,cas8e,DinG	NA|112aa|up_2|NZ_CP045178.1_8352947_8353283_+,NA|156aa|up_0|NZ_CP045178.1_8353809_8354277_+,NA|124aa|down_1|NZ_CP045178.1_8358887_8359259_+,NA|81aa|down_5|NZ_CP045178.1_8390721_8390964_+	NA|325aa|up_9|NZ_CP045178.1_8337576_8338551_-	smart00108, B_lectin, Bulb-type mannose-specific lectin	NA|286aa|up_8|NZ_CP045178.1_8339077_8339935_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|1100aa|up_7|NZ_CP045178.1_8340131_8343431_+	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|415aa|up_6|NZ_CP045178.1_8343427_8344672_+	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin	NA|1336aa|up_5|NZ_CP045178.1_8344966_8348974_-	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|469aa|up_4|NZ_CP045178.1_8349431_8350838_+	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD	NA|529aa|up_3|NZ_CP045178.1_8350883_8352470_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|112aa|up_2|NZ_CP045178.1_8352947_8353283_+	NA	NA|103aa|up_1|NZ_CP045178.1_8353374_8353683_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|156aa|up_0|NZ_CP045178.1_8353809_8354277_+	NA	NA|152aa|down_0|NZ_CP045178.1_8358429_8358885_+	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family	NA|124aa|down_1|NZ_CP045178.1_8358887_8359259_+	NA	NA|8736aa|down_2|NZ_CP045178.1_8359340_8385548_+	NF012197, lonely_Cys, lonely Cys domain-containing protein	NA|403aa|down_3|NZ_CP045178.1_8385956_8387165_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|866aa|down_4|NZ_CP045178.1_8387332_8389930_-	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated	NA|81aa|down_5|NZ_CP045178.1_8390721_8390964_+	NA	NA|772aa|down_6|NZ_CP045178.1_8391107_8393423_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|397aa|down_7|NZ_CP045178.1_8394307_8395498_-	PLN02856, PLN02856, fumarylacetoacetase	NA|135aa|down_8|NZ_CP045178.1_8395724_8396129_-	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|284aa|down_9|NZ_CP045178.1_8396495_8397347_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
